Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002554
CDS Infomation

pacid=37461535 polypeptide=PGSC0003DMP400001860 locus=PGSC0003DMG400000977 ID=PGSC0003DMT400002554.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGTTGAGATTTGGTCTTGTGTTGATAGTGTTGTGTCTTTCAACATCACTAGTG
AAAGGAGGAGATCCTATTTTGACCTTTGAATGGAAAGTGACTTATGGTACCATCTCTCCT
CTTGGTGTTCCTCAGCAAGTTATTTTGATCAATGATAAATTTCCAGGACCCATAATCAAT
GGCACATCCAATAATAACATTGTTGTCAATGTCTTCAACCAGTTGGATGAGCCATTCCTT
TTCACATGGAATGGCATCCAACAGAGGAAAAACTCTTGGCAAGAAGGCACCCTTGGCACC
AATTGTCCCATTCCTCCAGGGAGCAATTTCACATACCATTTCCAGGTCAAGGATCAAATT
GGAAGCTTTTTTTACTACCCCACCACAGCTTTGCATCGAGCAGCTGGTGGATATGGTGGA
ATAAGTGTCCATAGTCGGGCATTGATTCCCATCCCCTTTGATATTAACCCTGCCGATGAG
TTCTTTGTCTTGGTGAGTGATTGGTACACCAAAAGTCATACTCAATTGAGAAAGTTTTTG
GACAGTGGGCGCTCGATGGGAAGGCCTGATGGAATAATCATCAATGGAAAAGGTGGAAAA
GGCGATGGAAAAGATGAGCCACTGTTCTCTATGACCCCTGGAAAGACATATAGGTATAGG
TTTTGTAATGCTGGTATGAAGGATTCCATCAATGTTAGAATCCAAGGGCATACCATGAAA
TTGGTGGAAATGGAAGGATCTCACGTTGTGCAAAACATGTATGATTCACTAGATATTCAC
TTGGGACAATGCGTCTCTGTCTTAGTGACTGCTGATAAAGATCCCAAGGATTACCTCCTT
GTGGCCTCTACGCGATTCACCAAGGAACCCCACACTGCTACATCCATAATCCGTTACACT
AATGGCAATGGCCCTGCCTCACCAGAGTTGCCAAAAGCCCCAATTGGTTGGGCTTGGTCA
CTCAACCAATTTCGCTCTTTCCGTTGGAATTTAACGGCAAGTGCAGCTAGACCTAATCCA
CAAGGATCATACCACTACGGCCAAATCAACATTACACGCACCATCAAACTTGTGAATACA
GCCGGGACTGTGGACGGAAAGCTCCGATATGCCATCAATGGTGTCTCACATGTGAACCCT
ACAACCCCAATTAAGTTGGTTGAATACTATGGTGTTGAAGATAAGATCTTCAAATATGAC
CTTATGAAGGATGAATATGAACCTCCAGCTGGGAAAGCAGAAGAGAAGATCACACTCGCA
CCCAATGTAGTTAAAGTCACTTACCGTAACTTTGTGGAGATCATCTTTGAGAACCATGAA
AAGAGTGTACAATCTTTTCACTTGGCCGGATACTCCTTCTTCGCTGTTGCGATTGAACCT
GGAAAATGGACCCCAGAGAAGAGGAAGAACTACAATTTGCTTGATGCAGTATCCAGGAAT
ACCATCCAAGTTTATCCCAACTCATGGGCAGCCATAATGACCACTCTTGATAATGCTGGT
CTTTGGAACCTGAGATCCAACTCAGTGGAAAGACAATACTTGGGGCAACAACTTTACTTT
AGCGCCCTTTCTCCAAAAAGAGATTTGAAAGATGAATATAACATGCCAGACAATGATGTC
TTGTGTGGAATCATCAAGGATATGCCTCTTCCAAAACCTTATTCTGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001860
PEP Infomation

pacid=37461535 transcript=PGSC0003DMT400002554 locus=PGSC0003DMG400000977 ID=PGSC0003DMT400002554.v4.03 annot-version=v4.03
Sequence

MEKLRFGLVLIVLCLSTSLVKGGDPILTFEWKVTYGTISPLGVPQQVILINDKFPGPIIN
GTSNNNIVVNVFNQLDEPFLFTWNGIQQRKNSWQEGTLGTNCPIPPGSNFTYHFQVKDQI
GSFFYYPTTALHRAAGGYGGISVHSRALIPIPFDINPADEFFVLVSDWYTKSHTQLRKFL
DSGRSMGRPDGIIINGKGGKGDGKDEPLFSMTPGKTYRYRFCNAGMKDSINVRIQGHTMK
LVEMEGSHVVQNMYDSLDIHLGQCVSVLVTADKDPKDYLLVASTRFTKEPHTATSIIRYT
NGNGPASPELPKAPIGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNT
AGTVDGKLRYAINGVSHVNPTTPIKLVEYYGVEDKIFKYDLMKDEYEPPAGKAEEKITLA
PNVVKVTYRNFVEIIFENHEKSVQSFHLAGYSFFAVAIEPGKWTPEKRKNYNLLDAVSRN
TIQVYPNSWAAIMTTLDNAGLWNLRSNSVERQYLGQQLYFSALSPKRDLKDEYNMPDNDV
LCGIIKDMPLPKPYSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400002554
Transcript Infomation

pacid=37461535 locus=PGSC0003DMG400000977 ID=PGSC0003DMT400002554.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGTTGAGATTTGGTCTTGTGTTGATAGTGTTGTGTCTTTCAACATCACTAGTG
AAAGGAGGAGATCCTATTTTGACCTTTGAATGGAAAGTGACTTATGGTACCATCTCTCCT
CTTGGTGTTCCTCAGCAAGTTATTTTGATCAATGATAAATTTCCAGGACCCATAATCAAT
GGCACATCCAATAATAACATTGTTGTCAATGTCTTCAACCAGTTGGATGAGCCATTCCTT
TTCACATGGAATGGCATCCAACAGAGGAAAAACTCTTGGCAAGAAGGCACCCTTGGCACC
AATTGTCCCATTCCTCCAGGGAGCAATTTCACATACCATTTCCAGGTCAAGGATCAAATT
GGAAGCTTTTTTTACTACCCCACCACAGCTTTGCATCGAGCAGCTGGTGGATATGGTGGA
ATAAGTGTCCATAGTCGGGCATTGATTCCCATCCCCTTTGATATTAACCCTGCCGATGAG
TTCTTTGTCTTGGTGAGTGATTGGTACACCAAAAGTCATACTCAATTGAGAAAGTTTTTG
GACAGTGGGCGCTCGATGGGAAGGCCTGATGGAATAATCATCAATGGAAAAGGTGGAAAA
GGCGATGGAAAAGATGAGCCACTGTTCTCTATGACCCCTGGAAAGACATATAGGTATAGG
TTTTGTAATGCTGGTATGAAGGATTCCATCAATGTTAGAATCCAAGGGCATACCATGAAA
TTGGTGGAAATGGAAGGATCTCACGTTGTGCAAAACATGTATGATTCACTAGATATTCAC
TTGGGACAATGCGTCTCTGTCTTAGTGACTGCTGATAAAGATCCCAAGGATTACCTCCTT
GTGGCCTCTACGCGATTCACCAAGGAACCCCACACTGCTACATCCATAATCCGTTACACT
AATGGCAATGGCCCTGCCTCACCAGAGTTGCCAAAAGCCCCAATTGGTTGGGCTTGGTCA
CTCAACCAATTTCGCTCTTTCCGTTGGAATTTAACGGCAAGTGCAGCTAGACCTAATCCA
CAAGGATCATACCACTACGGCCAAATCAACATTACACGCACCATCAAACTTGTGAATACA
GCCGGGACTGTGGACGGAAAGCTCCGATATGCCATCAATGGTGTCTCACATGTGAACCCT
ACAACCCCAATTAAGTTGGTTGAATACTATGGTGTTGAAGATAAGATCTTCAAATATGAC
CTTATGAAGGATGAATATGAACCTCCAGCTGGGAAAGCAGAAGAGAAGATCACACTCGCA
CCCAATGTAGTTAAAGTCACTTACCGTAACTTTGTGGAGATCATCTTTGAGAACCATGAA
AAGAGTGTACAATCTTTTCACTTGGCCGGATACTCCTTCTTCGCTGTTGCGATTGAACCT
GGAAAATGGACCCCAGAGAAGAGGAAGAACTACAATTTGCTTGATGCAGTATCCAGGAAT
ACCATCCAAGTTTATCCCAACTCATGGGCAGCCATAATGACCACTCTTGATAATGCTGGT
CTTTGGAACCTGAGATCCAACTCAGTGGAAAGACAATACTTGGGGCAACAACTTTACTTT
AGCGCCCTTTCTCCAAAAAGAGATTTGAAAGATGAATATAACATGCCAGACAATGATGTC
TTGTGTGGAATCATCAAGGATATGCCTCTTCCAAAACCTTATTCTGTGTAA