Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002542
CDS Infomation

pacid=37468216 polypeptide=PGSC0003DMP400001852 locus=PGSC0003DMG400000968 ID=PGSC0003DMT400002542.v4.03 annot-version=v4.03
Sequence

ATGGGAGCTTCAATGTGGAGTCTACAACTTCATACCGTCTCAGTTCCGGTACCACTTGAG
GCATTCCGGAGGTATACTAGTACTAGGAAGAGGACCTTCAAGAAGCTTAACGTAGTTGCC
AATGGTGATGCCAAGAATTCGAAGAATCTTCCGCACCGAGTTATGGTTGTCAAGTCCAAC
AAGCCCAATTTTCCTCTTCTACTGCAACACGCTGTTACCAAATTACAAGAGAGCGTCAAA
TCTCTACCTCCCGCTACCCTCCTGGTAAAGAAACATTCTGGTGTTAGTTTAGCAATTGCA
CTATCTACCATGGTCACCTTGTTGGTTATTTTGGTGAGGAGTTATGTTGCAAAAAGGTCA
AAACGCAACCGCCCTGGGTCTGTAGCTGATCTTGTCAGGCGTGGTCAATTAAGATCGGAT
AGAAGAGGCATATCAAATCCTCTTAAATATGACGACCCATTCAATAATCCATTAGTGAAA
GTCAGCAAGAGCAATTCAACTGTAGAGATGTGTGGGCAAGTGTACCGTTTGGCACCAGTA
ACTCTTACCAAGGAGCAACAAGCTGTCCATCAGAAGCGGAGATCACGTGCATATCAGTGG
AAGAGACCAACATTGTTTCTTAGAGAAGGTGATTCAGTGCCTCCTGATGTGGATCCTGAC
ACTATCAGGTGGATTCCTGCAAATCATCCTTTTGCAACTACTGCAAGTGAAATTGACGAG
GATCTGGCACAAACTAATGTTTATCAGAAGCACGGTGTTCCATTCCGTATTCAGGCAGAA
CATGAAGCCCTGCAGAGAAAACTTGAGGCACTCCAAAGTGAGCAAAAACTTGGTAAACTA
GTGATAGATCCTGGGGCTGCAAAAGATTTTGAGAGGCCATTCAAAACTCGACTAAAGACA
GAGGAGCAGCTCGATCAAGGCCCAAATAACCGGCAAATGGGCTCCAATAGTTCAGAATCA
GAGGGTGCGTGTGATTCATTTGTGAACAAGCATAGTTCTGAAGAAATGGAGAAACCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001852
PEP Infomation

pacid=37468216 transcript=PGSC0003DMT400002542 locus=PGSC0003DMG400000968 ID=PGSC0003DMT400002542.v4.03 annot-version=v4.03
Sequence

MGASMWSLQLHTVSVPVPLEAFRRYTSTRKRTFKKLNVVANGDAKNSKNLPHRVMVVKSN
KPNFPLLLQHAVTKLQESVKSLPPATLLVKKHSGVSLAIALSTMVTLLVILVRSYVAKRS
KRNRPGSVADLVRRGQLRSDRRGISNPLKYDDPFNNPLVKVSKSNSTVEMCGQVYRLAPV
TLTKEQQAVHQKRRSRAYQWKRPTLFLREGDSVPPDVDPDTIRWIPANHPFATTASEIDE
DLAQTNVYQKHGVPFRIQAEHEALQRKLEALQSEQKLGKLVIDPGAAKDFERPFKTRLKT
EEQLDQGPNNRQMGSNSSESEGACDSFVNKHSSEEMEKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400002542
Transcript Infomation

pacid=37468216 locus=PGSC0003DMG400000968 ID=PGSC0003DMT400002542.v4.03 annot-version=v4.03
Sequence

ATGGGAGCTTCAATGTGGAGTCTACAACTTCATACCGTCTCAGTTCCGGTACCACTTGAG
GCATTCCGGAGGTATACTAGTACTAGGAAGAGGACCTTCAAGAAGCTTAACGTAGTTGCC
AATGGTGATGCCAAGAATTCGAAGAATCTTCCGCACCGAGTTATGGTTGTCAAGTCCAAC
AAGCCCAATTTTCCTCTTCTACTGCAACACGCTGTTACCAAATTACAAGAGAGCGTCAAA
TCTCTACCTCCCGCTACCCTCCTGGTAAAGAAACATTCTGGTGTTAGTTTAGCAATTGCA
CTATCTACCATGGTCACCTTGTTGGTTATTTTGGTGAGGAGTTATGTTGCAAAAAGGTCA
AAACGCAACCGCCCTGGGTCTGTAGCTGATCTTGTCAGGCGTGGTCAATTAAGATCGGAT
AGAAGAGGCATATCAAATCCTCTTAAATATGACGACCCATTCAATAATCCATTAGTGAAA
GTCAGCAAGAGCAATTCAACTGTAGAGATGTGTGGGCAAGTGTACCGTTTGGCACCAGTA
ACTCTTACCAAGGAGCAACAAGCTGTCCATCAGAAGCGGAGATCACGTGCATATCAGTGG
AAGAGACCAACATTGTTTCTTAGAGAAGGTGATTCAGTGCCTCCTGATGTGGATCCTGAC
ACTATCAGGTGGATTCCTGCAAATCATCCTTTTGCAACTACTGCAAGTGAAATTGACGAG
GATCTGGCACAAACTAATGTTTATCAGAAGCACGGTGTTCCATTCCGTATTCAGGCAGAA
CATGAAGCCCTGCAGAGAAAACTTGAGGCACTCCAAAGTGAGCAAAAACTTGGTAAACTA
GTGATAGATCCTGGGGCTGCAAAAGATTTTGAGAGGCCATTCAAAACTCGACTAAAGACA
GAGGAGCAGCTCGATCAAGGCCCAAATAACCGGCAAATGGGCTCCAATAGTTCAGAATCA
GAGGGTGCGTGTGATTCATTTGTGAACAAGCATAGTTCTGAAGAAATGGAGAAACCCTAG