Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002527
CDS Infomation

pacid=37469610 polypeptide=PGSC0003DMP400001840 locus=PGSC0003DMG400000963 ID=PGSC0003DMT400002527.v4.03 annot-version=v4.03
Sequence

ATGGGTAAGTGCCATCGCCGGAACGATGTCGCATCGGTAGTCCTCGACCCTCCTGTTTCC
ACTACCGGACCTGATCACTTCAAGCTCTGGTCTACTTTTTCTCGCGCATCCTTCCGCCGC
ATGATCCTCGATGCCGTCCGATGTGGCGGCAGAAGTCACAAGCCTTCTTCCAAGTCTCCT
CCCGATCAGCCGCCCAGACCTGTTGGTCCCATTGATGTAAGATCTGAATGTGAACACAAG
AAACCTGCCGGATCCGACAGGTTGTCGGAGCTCTTGAGGCTGTCCGAGTCGTCTGAGAAC
GAGGAGGATGTACGGCAAAAGGTGCAAATGTTGGAGGAGTTGAAGAGAGTAGTCAAGCGC
TTACAGAGTAGCAATGTTTTGGAAGGAGCGAAGGAGGTCCGGCGACTTACCAAAGAGGTT
TCCGACGCCAGAACCACCCTAGCTTTGCTCGGAGCGATTCCACCACTTATGGCGCTGCTT
GATTCAGAAGATTCCATTTCTCAGATCGCTGCTCTCTATGCTCTGCTTAACCTTGCAATT
GGCAATGATGCAAATAAAGCAGCCATCGTTAAGGCAGGGGCTATTCATAAGATGCTCAAG
CTGGTTAATGAATTCCCAAATTCAGAAGTCGCTGAAGCTGTAGTTGCTAATTTTCTTGGG
TTGAGTGCTTTGGACTCCAATAAACCCATAATTGGTTCATCTGGAGCAATTCCATTCCTG
GTGAAGAATTTGGACAACACAAACAGTTGTCAAGCTCGACAAGATTCGTTGAGAGCGCTT
TACAACCTTAGCATCTCGCCTTTGAATGTTATCCCCATACTTGAGAGTGATCTAATAGCC
TTTATCATGAACAAACTGGGAGATATGGATGTAAGCGAGAGATTTCTGTCCATTCTTTGC
AATTTAGTATCAGTAGCAGAGGCCCGAAAGGCAATTAGTAGTGTACCAGATGCATTCCCC
ATGTTGGTTGATGTTGTGAGTTGGACAGATGCACCAGGTTGCCAAGAGAAAGCATCCTAT
ATTTTGATGGTGATGGCTCACAAGTCGTATGGAGATAGACAGGCAATGATTGAGGCTGGA
GTTGCTTCAGCCCTGCTTGAATTGACCCTTCTAGGAAGCACATTGGCTCAGAAGCGGGCA
TCGAGAATCTTGGAATGCTTGAGGGTGGACAAAGGAAAGCAAGTTTCTGATAATTATGGT
GGTATGAGCACCACGATATCTGCCCCACAAGATTGTACAACATATTGTTCGAGTGTTGAA
TTGAAAGATGGGATGGAGGATGATATGATGAGTCAAGAGAAAAAAGCAGTGAAGCAATTA
GTCCAGCAGAGCCTGCAGAATAACATGAAGAGGATAGTGAAAAGGGCTAATCTACCCCAT
GAATTTGTTCCTTCTGATCATTTGAAGACCTTCACATCAAGCTCAACTTCTAAGAGCGTG
CCATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001840
PEP Infomation

pacid=37469610 transcript=PGSC0003DMT400002527 locus=PGSC0003DMG400000963 ID=PGSC0003DMT400002527.v4.03 annot-version=v4.03
Sequence

MGKCHRRNDVASVVLDPPVSTTGPDHFKLWSTFSRASFRRMILDAVRCGGRSHKPSSKSP
PDQPPRPVGPIDVRSECEHKKPAGSDRLSELLRLSESSENEEDVRQKVQMLEELKRVVKR
LQSSNVLEGAKEVRRLTKEVSDARTTLALLGAIPPLMALLDSEDSISQIAALYALLNLAI
GNDANKAAIVKAGAIHKMLKLVNEFPNSEVAEAVVANFLGLSALDSNKPIIGSSGAIPFL
VKNLDNTNSCQARQDSLRALYNLSISPLNVIPILESDLIAFIMNKLGDMDVSERFLSILC
NLVSVAEARKAISSVPDAFPMLVDVVSWTDAPGCQEKASYILMVMAHKSYGDRQAMIEAG
VASALLELTLLGSTLAQKRASRILECLRVDKGKQVSDNYGGMSTTISAPQDCTTYCSSVE
LKDGMEDDMMSQEKKAVKQLVQQSLQNNMKRIVKRANLPHEFVPSDHLKTFTSSSTSKSV
PF*

Transcript Sequence

Transcript ID

PGSC0003DMT400002527
Transcript Infomation

pacid=37469610 locus=PGSC0003DMG400000963 ID=PGSC0003DMT400002527.v4.03 annot-version=v4.03
Sequence

ATGGGTAAGTGCCATCGCCGGAACGATGTCGCATCGGTAGTCCTCGACCCTCCTGTTTCC
ACTACCGGACCTGATCACTTCAAGCTCTGGTCTACTTTTTCTCGCGCATCCTTCCGCCGC
ATGATCCTCGATGCCGTCCGATGTGGCGGCAGAAGTCACAAGCCTTCTTCCAAGTCTCCT
CCCGATCAGCCGCCCAGACCTGTTGGTCCCATTGATGTAAGATCTGAATGTGAACACAAG
AAACCTGCCGGATCCGACAGGTTGTCGGAGCTCTTGAGGCTGTCCGAGTCGTCTGAGAAC
GAGGAGGATGTACGGCAAAAGGTGCAAATGTTGGAGGAGTTGAAGAGAGTAGTCAAGCGC
TTACAGAGTAGCAATGTTTTGGAAGGAGCGAAGGAGGTCCGGCGACTTACCAAAGAGGTT
TCCGACGCCAGAACCACCCTAGCTTTGCTCGGAGCGATTCCACCACTTATGGCGCTGCTT
GATTCAGAAGATTCCATTTCTCAGATCGCTGCTCTCTATGCTCTGCTTAACCTTGCAATT
GGCAATGATGCAAATAAAGCAGCCATCGTTAAGGCAGGGGCTATTCATAAGATGCTCAAG
CTGGTTAATGAATTCCCAAATTCAGAAGTCGCTGAAGCTGTAGTTGCTAATTTTCTTGGG
TTGAGTGCTTTGGACTCCAATAAACCCATAATTGGTTCATCTGGAGCAATTCCATTCCTG
GTGAAGAATTTGGACAACACAAACAGTTGTCAAGCTCGACAAGATTCGTTGAGAGCGCTT
TACAACCTTAGCATCTCGCCTTTGAATGTTATCCCCATACTTGAGAGTGATCTAATAGCC
TTTATCATGAACAAACTGGGAGATATGGATGTAAGCGAGAGATTTCTGTCCATTCTTTGC
AATTTAGTATCAGTAGCAGAGGCCCGAAAGGCAATTAGTAGTGTACCAGATGCATTCCCC
ATGTTGGTTGATGTTGTGAGTTGGACAGATGCACCAGGTTGCCAAGAGAAAGCATCCTAT
ATTTTGATGGTGATGGCTCACAAGTCGTATGGAGATAGACAGGCAATGATTGAGGCTGGA
GTTGCTTCAGCCCTGCTTGAATTGACCCTTCTAGGAAGCACATTGGCTCAGAAGCGGGCA
TCGAGAATCTTGGAATGCTTGAGGGTGGACAAAGGAAAGCAAGTTTCTGATAATTATGGT
GGTATGAGCACCACGATATCTGCCCCACAAGATTGTACAACATATTGTTCGAGTGTTGAA
TTGAAAGATGGGATGGAGGATGATATGATGAGTCAAGAGAAAAAAGCAGTGAAGCAATTA
GTCCAGCAGAGCCTGCAGAATAACATGAAGAGGATAGTGAAAAGGGCTAATCTACCCCAT
GAATTTGTTCCTTCTGATCATTTGAAGACCTTCACATCAAGCTCAACTTCTAAGAGCGTG
CCATTTTGA