Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002504
CDS Infomation

pacid=37456799 polypeptide=PGSC0003DMP400001820 locus=PGSC0003DMG400000955 ID=PGSC0003DMT400002504.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCAGTGAAGATATTATTCTGTCAGCTGTGCTCAATCTTCTATCTGCATTTGCA
TTTCTTGTGGCCTTTGCTATTCTACGACTCCAACCAATCAACGACAGAGTGTACTTTTCA
AAATGGTATCTGAAGGGTATACGAGCAAGTCCGAGAAGTTCTGGAACATTTGTGAAAAAA
TTTGTCAACTTGGACTGCAGAACATACATAAGGTTCTTGAATTGGATGCCTGCAGCTCTA
AGAATGCCAGAACCAGAGCTTATCGGTCATGCTGGTCTTGATTCTGCCGTGTATATACGG
ATATACCTTCTTGGCTTGAAAATCTTCGTTCCTCTTGCACTACTTTCTTTTGCGGTTTTA
GTGCCTGTCAATTGGTCTGGGAAATCATTAGAGCAAACTGAGGGCCTAACATTCAGCACT
ATTGATAAACTTTCGATATCCAATGTGCCGGATGCATCAAAGAAGTTTTGGGCACACCTG
GTAATGGCTTACGTAGTCACATTTTGGACCTGCTATATACTTTACAAAGAATATCATATA
ATAACAACCATGAGGCTTCAGTTTCTGGCCTCTGAAAATCGTCGGCCTGATCAGTTCACT
GTCCTTGTGAGAAATGTCCCTCCAGATCCAGATGAATCAGTGTGCGAGCATGTCGAACAT
TTCTTTTGCGTGAATCATCCAGATCATTATCTAACACACCAGGTTGTTTACAATGCAAAT
AATTTAGCTAAATTGGTGGAAAAGAAGAAGAGCTACAAAAATTGGCTCACATACTACCAA
ACTAAGTATGAGAGGAACCCTAAGATTAAGCCAAAAACGAAGACAGGGGTTTGGGGCCTT
TGGGGAAAAACTGTGGATGCCATCGACTATTATACCACAGAAATTGAGAAGTTGAGTAAA
GAAGAAACTATAGAAAGAGAAAAGGTAATGAGTGATCCCAAAGCAATAGTTCCTGCAGCA
TTCGTTTCATTCAAATCTCGTTGGGGAGCAGCTGTCTGTGCTCAAACACAACAATCAAGT
AACCCAACCATTTGGTTGACACAATGGGCTCCTGAACCACGCGACGTCTATTGGAATAAT
CTTTCAATACCATTTGTTGAACTCAATGTCCGCAAACTGCTAATGACTGTTGCTTTCTTC
TTTCTTACATTCTTTTTTATGATCCCTATTGCATTTGTTCAATCTTTGGCAAGCATTGAT
GGTATAGAGAATAAACTTCCCGTCTTAAGGCCATTGATACAAATGGAAGTTGTCAAATCC
TTTATCCAAGGTGTTCTTCCTGGGATTATATTGAAGATCTTTCTGGTTCTTCTTCCTATG
ATTCTAATGGCCATGTCAAAAATAGAAGGCTATACATCACTTTCATCTTTGGACAGAAGA
TCAGCAACTAAATATCATTTTTTTATCCTTGTCAACGTGTTCTTGGGAAGTATCATCACT
GGAGCAGCCTTTGAGCAGCTTCAGAGATTCGTGGATGAGCCTCCATCGGAAATTCCAAAA
ACAGTTGGTGTAGCTATGCCGTTGAAGGCTACTTTCTTCATTACCTACATAATGGTTGAT
GGTTGGGCTGGAATTGCTGCAGAGATTCTTAGATTGGTTCCTTTCGTTATGTTTCATCTT
AAGAATACTTTTCTGGTAAAGACAGATCAGGATAGAGAGCAGGCTACAGATCCCGGTTCG
CTAAATTTCTCTGTATCAGAACCTCGCATACAACTGTACTTCCTACTAGGCCTTGTGTAC
TCAGTGGTCACACCTATACTCCTGCCTTTCATCATTGTCTTCTTCGCGTTCTCTTATATG
GTTTTTCGCCATCAGATCATTAATGTGTACGATCAGAAGTATGAGAGCGGCGCATCATTT
TGGCCAGATGTGCATCGTCGTATACTTACAGGTTTGGTGATATCCCAGCTTCTATTGCTG
GGTTTGTTGAGCACCAAAAATATTTCCAAATCAACACCTGTAATGATTGCACTTCCAGTT
TTGACAATCTGGTTCCATATATTTTGCAAGGGCCGATATGAGTCGGCATTTGTGAAATTC
CCCTTGCAGGATGCAATGGTGAAGGATACACTAGAACGGGCGACAGAACCAACTCTTAAT
CTTAAAGCATATCTCAAGGATGCTTATGTCCACCCAGTTTTTAAAGGTGTGGAGTTGGAC
AGACCGTCAGCAGTTGACGATGAGGAGAATAATCCACTTGTTCCTACGAAGAGATCACGT
AGGAGTAGTAAGTCTCATTCTGAAGAAGGCGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001820
PEP Infomation

pacid=37456799 transcript=PGSC0003DMT400002504 locus=PGSC0003DMG400000955 ID=PGSC0003DMT400002504.v4.03 annot-version=v4.03
Sequence

MASSEDIILSAVLNLLSAFAFLVAFAILRLQPINDRVYFSKWYLKGIRASPRSSGTFVKK
FVNLDCRTYIRFLNWMPAALRMPEPELIGHAGLDSAVYIRIYLLGLKIFVPLALLSFAVL
VPVNWSGKSLEQTEGLTFSTIDKLSISNVPDASKKFWAHLVMAYVVTFWTCYILYKEYHI
ITTMRLQFLASENRRPDQFTVLVRNVPPDPDESVCEHVEHFFCVNHPDHYLTHQVVYNAN
NLAKLVEKKKSYKNWLTYYQTKYERNPKIKPKTKTGVWGLWGKTVDAIDYYTTEIEKLSK
EETIEREKVMSDPKAIVPAAFVSFKSRWGAAVCAQTQQSSNPTIWLTQWAPEPRDVYWNN
LSIPFVELNVRKLLMTVAFFFLTFFFMIPIAFVQSLASIDGIENKLPVLRPLIQMEVVKS
FIQGVLPGIILKIFLVLLPMILMAMSKIEGYTSLSSLDRRSATKYHFFILVNVFLGSIIT
GAAFEQLQRFVDEPPSEIPKTVGVAMPLKATFFITYIMVDGWAGIAAEILRLVPFVMFHL
KNTFLVKTDQDREQATDPGSLNFSVSEPRIQLYFLLGLVYSVVTPILLPFIIVFFAFSYM
VFRHQIINVYDQKYESGASFWPDVHRRILTGLVISQLLLLGLLSTKNISKSTPVMIALPV
LTIWFHIFCKGRYESAFVKFPLQDAMVKDTLERATEPTLNLKAYLKDAYVHPVFKGVELD
RPSAVDDEENNPLVPTKRSRRSSKSHSEEGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400002504
Transcript Infomation

pacid=37456799 locus=PGSC0003DMG400000955 ID=PGSC0003DMT400002504.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCAGTGAAGATATTATTCTGTCAGCTGTGCTCAATCTTCTATCTGCATTTGCA
TTTCTTGTGGCCTTTGCTATTCTACGACTCCAACCAATCAACGACAGAGTGTACTTTTCA
AAATGGTATCTGAAGGGTATACGAGCAAGTCCGAGAAGTTCTGGAACATTTGTGAAAAAA
TTTGTCAACTTGGACTGCAGAACATACATAAGGTTCTTGAATTGGATGCCTGCAGCTCTA
AGAATGCCAGAACCAGAGCTTATCGGTCATGCTGGTCTTGATTCTGCCGTGTATATACGG
ATATACCTTCTTGGCTTGAAAATCTTCGTTCCTCTTGCACTACTTTCTTTTGCGGTTTTA
GTGCCTGTCAATTGGTCTGGGAAATCATTAGAGCAAACTGAGGGCCTAACATTCAGCACT
ATTGATAAACTTTCGATATCCAATGTGCCGGATGCATCAAAGAAGTTTTGGGCACACCTG
GTAATGGCTTACGTAGTCACATTTTGGACCTGCTATATACTTTACAAAGAATATCATATA
ATAACAACCATGAGGCTTCAGTTTCTGGCCTCTGAAAATCGTCGGCCTGATCAGTTCACT
GTCCTTGTGAGAAATGTCCCTCCAGATCCAGATGAATCAGTGTGCGAGCATGTCGAACAT
TTCTTTTGCGTGAATCATCCAGATCATTATCTAACACACCAGGTTGTTTACAATGCAAAT
AATTTAGCTAAATTGGTGGAAAAGAAGAAGAGCTACAAAAATTGGCTCACATACTACCAA
ACTAAGTATGAGAGGAACCCTAAGATTAAGCCAAAAACGAAGACAGGGGTTTGGGGCCTT
TGGGGAAAAACTGTGGATGCCATCGACTATTATACCACAGAAATTGAGAAGTTGAGTAAA
GAAGAAACTATAGAAAGAGAAAAGGTAATGAGTGATCCCAAAGCAATAGTTCCTGCAGCA
TTCGTTTCATTCAAATCTCGTTGGGGAGCAGCTGTCTGTGCTCAAACACAACAATCAAGT
AACCCAACCATTTGGTTGACACAATGGGCTCCTGAACCACGCGACGTCTATTGGAATAAT
CTTTCAATACCATTTGTTGAACTCAATGTCCGCAAACTGCTAATGACTGTTGCTTTCTTC
TTTCTTACATTCTTTTTTATGATCCCTATTGCATTTGTTCAATCTTTGGCAAGCATTGAT
GGTATAGAGAATAAACTTCCCGTCTTAAGGCCATTGATACAAATGGAAGTTGTCAAATCC
TTTATCCAAGGTGTTCTTCCTGGGATTATATTGAAGATCTTTCTGGTTCTTCTTCCTATG
ATTCTAATGGCCATGTCAAAAATAGAAGGCTATACATCACTTTCATCTTTGGACAGAAGA
TCAGCAACTAAATATCATTTTTTTATCCTTGTCAACGTGTTCTTGGGAAGTATCATCACT
GGAGCAGCCTTTGAGCAGCTTCAGAGATTCGTGGATGAGCCTCCATCGGAAATTCCAAAA
ACAGTTGGTGTAGCTATGCCGTTGAAGGCTACTTTCTTCATTACCTACATAATGGTTGAT
GGTTGGGCTGGAATTGCTGCAGAGATTCTTAGATTGGTTCCTTTCGTTATGTTTCATCTT
AAGAATACTTTTCTGGTAAAGACAGATCAGGATAGAGAGCAGGCTACAGATCCCGGTTCG
CTAAATTTCTCTGTATCAGAACCTCGCATACAACTGTACTTCCTACTAGGCCTTGTGTAC
TCAGTGGTCACACCTATACTCCTGCCTTTCATCATTGTCTTCTTCGCGTTCTCTTATATG
GTTTTTCGCCATCAGATCATTAATGTGTACGATCAGAAGTATGAGAGCGGCGCATCATTT
TGGCCAGATGTGCATCGTCGTATACTTACAGGTTTGGTGATATCCCAGCTTCTATTGCTG
GGTTTGTTGAGCACCAAAAATATTTCCAAATCAACACCTGTAATGATTGCACTTCCAGTT
TTGACAATCTGGTTCCATATATTTTGCAAGGGCCGATATGAGTCGGCATTTGTGAAATTC
CCCTTGCAGGATGCAATGGTGAAGGATACACTAGAACGGGCGACAGAACCAACTCTTAAT
CTTAAAGCATATCTCAAGGATGCTTATGTCCACCCAGTTTTTAAAGGTGTGGAGTTGGAC
AGACCGTCAGCAGTTGACGATGAGGAGAATAATCCACTTGTTCCTACGAAGAGATCACGT
AGGAGTAGTAAGTCTCATTCTGAAGAAGGCGTTTGA