Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002412
CDS Infomation

pacid=37432783 polypeptide=PGSC0003DMP400001753 locus=PGSC0003DMG401000923 ID=PGSC0003DMT400002412.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCGGCCACGAGAGTTTTGCTGCATCTTCTAATGTATCAAATGAGTGCAGTAGT
CCCCAGGAACCAGGACCAAGTGTTGATCATTTGAGTAATTTATGTGGTAGTCTTGAGAAA
CTCCTGCTTAATCCTGAATATAACTACAGTGATGCAGAAATAGTCGTTGAGGGGATTGAT
GTTGGCGTTAATCGCTGTATATTGGCTGCACGAAGTCAGTTTTTCCATGAAAAGTTTAAG
GAGCAGAATGAGAATTCCTTGAAAAATGAAAAGCCTAAATATTTGCTGAAGGATTTGGTG
CGTGTTGCCTCAATTGGCTATGAAGTATTCATGGTCCTCCTGAATTATTTATATACGGGA
AAGATTAAGTCGTCTCCTTCAGAAGTTTCGAGTTGTGTTGATAACGCTTGTGCTCATGAT
GCTTGCCGCCCTGCCATTAATTATGCAGTGGAACTCATGTATGCTTCGTCCACTTTTCAG
ATAAAAGAACTCGTTATGGTCGTAGAGCGCTATCTCGACAACTTTGTTGATAAGGCTACT
CCTGAGGATGTAATACCCATACTTTTAGTTGCCTTTCACTGTAAATCTAATCAACTTCTT
GAACACTGCATCCAGAGAGTGGCACGATCTGATCTAGACAATGCTACTCTTGAGAAAGAA
CTCCCTCATGAAGTTTTGACTGACATAAAATCAAGGCGCCTCAAGTCTCGACAAGGGACT
GAACAGGAGTCATTAGAAGAAGACTCCTTGAGTGAAAAGAGAATTAGGAGGATTCTGAAG
GCTCTGGAGTCTGATGACATTGAACTGCTAACACTACTCCTGGAAGAGTCAAACGTCACT
TTAAACGATGCTTGTGCTCTTCATTATGCTGCTGCCTATTGCAACTCCAAGGTTGTGAAC
GAGGTACTTGAGCTGGGTTTAGGCGCTGATGTCAATCTTCAGAACTCCCGAGGATATAAT
GTCCTTCATGTTGCAGCTAGACGAAAGGAGCCATCAATAATAATGGGACTACTTGCAAAA
GGAGCATCGGTCTTGGATACTACACGCGACGGACATACAGCACTATCCATATGCCGTAGA
TTGACTCGTCTAAAGGATTACAATGATCCACCGGAGCAAGGAAAGGTTACTAATAAAGAC
CGGTTATGCATTGATGTTTTGGAGAGAGAGATGATTAGGAATCCTATGATTGGGAGCATG
TCTTCTTCATCATTGGTGTTGGCTGATGAATTACTCATGAGGTTGCTTTTATTTGAAAAT
AGAGTGGCATTGGCACGGATGTTATTTCCTCAGGAAGCCATGCTAGCTATGGAAATAGCA
CATGCTGATTCAACCGCAGAGTTTACTGGACTTTCAGCAACAAATGGCTTATGCAGAAAT
CCGAGAGGGGTTGACTTGAACAAATTACCATCTGAGCAAGTGAAAAGACTCCAAGAGCGG
CTGGTCGCACTACTGAGAACAGTGGAGACAGGTCGACGTTTTTTCCCAAACTGCTCCGAA
GTTTTAGATAGATTACTGGAGGATGACAAACTAGATTCGTTGATGTTAGAAAGTGGCACC
CCTGAGGAACAAAGATCAAAGAAGATGCGATACACAGAACTCAAGGATGAAGTTATGGAG
GCATTCAAGAAAGACAAAGCTGAAAAGAACTGGGCGGGGTTCTCTACGTCTTCCTCCTCT
TCATGTTCTCCAAAGACTAATGTCAGTCACAAGTTTAGAAAAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001753
PEP Infomation

pacid=37432783 transcript=PGSC0003DMT400002412 locus=PGSC0003DMG401000923 ID=PGSC0003DMT400002412.v4.03 annot-version=v4.03
Sequence

MESGHESFAASSNVSNECSSPQEPGPSVDHLSNLCGSLEKLLLNPEYNYSDAEIVVEGID
VGVNRCILAARSQFFHEKFKEQNENSLKNEKPKYLLKDLVRVASIGYEVFMVLLNYLYTG
KIKSSPSEVSSCVDNACAHDACRPAINYAVELMYASSTFQIKELVMVVERYLDNFVDKAT
PEDVIPILLVAFHCKSNQLLEHCIQRVARSDLDNATLEKELPHEVLTDIKSRRLKSRQGT
EQESLEEDSLSEKRIRRILKALESDDIELLTLLLEESNVTLNDACALHYAAAYCNSKVVN
EVLELGLGADVNLQNSRGYNVLHVAARRKEPSIIMGLLAKGASVLDTTRDGHTALSICRR
LTRLKDYNDPPEQGKVTNKDRLCIDVLEREMIRNPMIGSMSSSSLVLADELLMRLLLFEN
RVALARMLFPQEAMLAMEIAHADSTAEFTGLSATNGLCRNPRGVDLNKLPSEQVKRLQER
LVALLRTVETGRRFFPNCSEVLDRLLEDDKLDSLMLESGTPEEQRSKKMRYTELKDEVME
AFKKDKAEKNWAGFSTSSSSSCSPKTNVSHKFRKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400002412
Transcript Infomation

pacid=37432783 locus=PGSC0003DMG401000923 ID=PGSC0003DMT400002412.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCGGCCACGAGAGTTTTGCTGCATCTTCTAATGTATCAAATGAGTGCAGTAGT
CCCCAGGAACCAGGACCAAGTGTTGATCATTTGAGTAATTTATGTGGTAGTCTTGAGAAA
CTCCTGCTTAATCCTGAATATAACTACAGTGATGCAGAAATAGTCGTTGAGGGGATTGAT
GTTGGCGTTAATCGCTGTATATTGGCTGCACGAAGTCAGTTTTTCCATGAAAAGTTTAAG
GAGCAGAATGAGAATTCCTTGAAAAATGAAAAGCCTAAATATTTGCTGAAGGATTTGGTG
CGTGTTGCCTCAATTGGCTATGAAGTATTCATGGTCCTCCTGAATTATTTATATACGGGA
AAGATTAAGTCGTCTCCTTCAGAAGTTTCGAGTTGTGTTGATAACGCTTGTGCTCATGAT
GCTTGCCGCCCTGCCATTAATTATGCAGTGGAACTCATGTATGCTTCGTCCACTTTTCAG
ATAAAAGAACTCGTTATGGTCGTAGAGCGCTATCTCGACAACTTTGTTGATAAGGCTACT
CCTGAGGATGTAATACCCATACTTTTAGTTGCCTTTCACTGTAAATCTAATCAACTTCTT
GAACACTGCATCCAGAGAGTGGCACGATCTGATCTAGACAATGCTACTCTTGAGAAAGAA
CTCCCTCATGAAGTTTTGACTGACATAAAATCAAGGCGCCTCAAGTCTCGACAAGGGACT
GAACAGGAGTCATTAGAAGAAGACTCCTTGAGTGAAAAGAGAATTAGGAGGATTCTGAAG
GCTCTGGAGTCTGATGACATTGAACTGCTAACACTACTCCTGGAAGAGTCAAACGTCACT
TTAAACGATGCTTGTGCTCTTCATTATGCTGCTGCCTATTGCAACTCCAAGGTTGTGAAC
GAGGTACTTGAGCTGGGTTTAGGCGCTGATGTCAATCTTCAGAACTCCCGAGGATATAAT
GTCCTTCATGTTGCAGCTAGACGAAAGGAGCCATCAATAATAATGGGACTACTTGCAAAA
GGAGCATCGGTCTTGGATACTACACGCGACGGACATACAGCACTATCCATATGCCGTAGA
TTGACTCGTCTAAAGGATTACAATGATCCACCGGAGCAAGGAAAGGTTACTAATAAAGAC
CGGTTATGCATTGATGTTTTGGAGAGAGAGATGATTAGGAATCCTATGATTGGGAGCATG
TCTTCTTCATCATTGGTGTTGGCTGATGAATTACTCATGAGGTTGCTTTTATTTGAAAAT
AGAGTGGCATTGGCACGGATGTTATTTCCTCAGGAAGCCATGCTAGCTATGGAAATAGCA
CATGCTGATTCAACCGCAGAGTTTACTGGACTTTCAGCAACAAATGGCTTATGCAGAAAT
CCGAGAGGGGTTGACTTGAACAAATTACCATCTGAGCAAGTGAAAAGACTCCAAGAGCGG
CTGGTCGCACTACTGAGAACAGTGGAGACAGGTCGACGTTTTTTCCCAAACTGCTCCGAA
GTTTTAGATAGATTACTGGAGGATGACAAACTAGATTCGTTGATGTTAGAAAGTGGCACC
CCTGAGGAACAAAGATCAAAGAAGATGCGATACACAGAACTCAAGGATGAAGTTATGGAG
GCATTCAAGAAAGACAAAGCTGAAAAGAACTGGGCGGGGTTCTCTACGTCTTCCTCCTCT
TCATGTTCTCCAAAGACTAATGTCAGTCACAAGTTTAGAAAAAAGTAG