Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002367
CDS Infomation

pacid=37465746 polypeptide=PGSC0003DMP400001717 locus=PGSC0003DMG400000905 ID=PGSC0003DMT400002367.v4.03 annot-version=v4.03
Sequence

ATGGGTGTACTGGTTGCGGAGTCTGGGGAAAATCAGAATCAGACTGCTGTAGTTGTTGAT
AAGAAGAAAAACCGTCGATCTAGACGATCTAAGCAAAATTCTCCTCCAACAGCAAGTAGT
TCGCTGACTGGCTGTCTTGGGGAATCAAATTTTAAGGGAGGTGTTCCCATCTTGAATCAC
GAAGGATCTAAAGAGTTTTCATTGCCTAGAGCATCAGACATTGCCTTTACTTCCTTGCCC
ACAATGCGTTTAAATGAACAGGCAGCAGAGACTGAAAGTCTCCCTGTGCAGCTAACGTTT
TCACCGGGTGTTGGTGGACAAGTATATTCAGGTTCATGCCCAGACTATATTGCTTATGGT
GACCAGTCAATTACTTCTTACCCACAGAGGAAATATTTTTGTTCACATTGGCCAGCAGAA
GCCGTTCATAAAGCAGTGGAGAGGGGTCATGTCTTTAAAGCATTATTTCGTGTCAATGCC
CACAATAGACTTGAGGCCTATTGTAAAGTTGATGGTGTGCGAACAGATGTTCTTATTAGT
GGAGCTGCAGCTCAAAACAGAGCCGTTGAAGGAGACATTGTTGCTGTTGAAGTTGATCCT
CCTTCTCTTTGGACTAGAATGAAAGGATATACAGTTGGTGTTGAGAGTTCCACTTTGGTA
GATGATGGTATGTTGGAGTCTGACAATTCAGACTTTGTCAGAGAGTGTTGCAAAGGGAAG
AACAAGGTAGACACAGATTATGAGTTCAGTAGTTTTGGAAATTGTTCTAGCCCCTTGGAA
AGTGTGTTAGGTTATAGAAGTGGGCAGTCCTTTGGAGACATTTCACATCCTGAAGAAAAG
GTACCTGCGGAGAATGATTATGTCAATAGACATAATATGACTGCTCCGAAACCTTCCATG
GTTGGGTGCTATAGTGAAATAAATGATGCTATGCATGCAACAGAGAGATTGTCAGCTGCT
GTGGATTCATTCCCATCTAAACGACCAACAGGCAGGGTTGTGGCTATCCTTGAAGGGTCA
CCTCGTCGGGACACTATTGTCGGTTTTCTCAATGTCAAGAAGTGGATGTGGAGTAGAGAA
GGTAACAAAAAGGACTTGAAGAAGAATAAATATTTATCGACTGCCTTGAACTGTCAATAT
CTCTTGTTAACACCAAATGATCCTCGGCTTCCGAAAATGATGGTGCCGTTTAAGAGCCTG
CCAGACCTCATTTTGAAAAGATTGGAAGCTGGTGATGTGGCAGTGGAGATGGACCTAGTA
GCCGCACGGATTGCAGACTGGGCAGAAGAGAACTATATCCCTGAAGCTCATGTCACTGAC
ATATTTGGACGAGGTGGAGAACTGGAGCCACAGCTTGCTGCAACCTTATATGAAAATGCA
ATTGATTCTTCAGAATTCTGTCAACAGACCCTATCATGTCTTCCAAGTATCCCATGGGAA
ATACCTAAAGAGGAGCTTCAGAGTAGAAGAGACATCAGAAATTTGTGTGTTTTTACAATT
GACCCTGCTACTGCCACCGATCTTGATGATGCACTGTCTGTTGAAAGGTTGCCTGACGGT
ATTTTTAGAGTTGGGGTTCATATAGCTGATGTCTCGTACTTTGTTCTACCAGACTCAGCT
TTAGATGAAATTGCCCAAGCGAGGTCAACAAGTGTGTATTTGTTGCAAAGTAAATTGCCA
ATGTTGCCCCCATTGCTCTCTGAGAATCTGGGTTCGCTTAATCCTGGTGTGGACAGACTT
GCTTTTTCTATTTTTTGGGACATCAATCAATCTGGGGAATTTATTCAGCGCTGGATTGGC
CGCACTATAATTCAATCTTGTTGCAAGCTCTCATATGATCATGCTCAGGATATTATTGAT
GGGTTGCTTGATAATCCAAGTTCTTATAAAGGAGAACATTCTTGGCCAGTGTTGCATGGC
CTTTTTAAATGGTCTGATGTTGTTACATCTGTCAAGAACCTTTATGAAATCTCTAAAATC
TTGAAGAAAAAGAGGTTTGAAGATGGGGCACTGTCACTCGAAAGTCCCAAAATAGTTTTC
TTATTTGATGAAGAAGGGATACCTTATGATAGTGTGCTCAGTGGAAGGAAGGAGTCAAAC
ATGCTTGTTGAGGAGTTTATGCTTTTGGCCAACAGGACAGCTGCTGAAGTTATAACTAGA
GCTTATCCTTCCAGTGCACTATTGCGAAGGCACCCTGAACCCAACCCGCGTAAGCTCAGA
GAGTTTGAGTCCTTCTGCTCTAAACATGGTCTGAGATTGGACACTACTTCTTCTGGCCAG
ATTCATAATTCGTTGGAGTGCATTAGACGAGAGCTTGCGGATGATTCTGTGTTAACAGAT
ATTCTTATGTCTTACGCTGCAAGACCCATGCAATTGGCAACTTACTTCTGCAGTGGCGAT
GTAGAAGATGAAAATGATAGGGGTCATTATGCCCTTGCTGTTCCTTTATACACACACTTT
ACTTCTCCGCTCCGGCGCTATCCGGATATTCTGGTGCATCGGATGCTTGCTGCAGCTGTA
GAAGCTGAAGAGGTGTATCTGAAGCTCAAGTTGTTGCAAAATCCAGATCGGGGAGAAATG
AGACGCCAAAGATGTTTGACCGATGTATACTTCAATAAAGATGCAATTGAATCACCTGAA
GCTCAAGAAGCATTATCTGCAGCAGCATCAAAACATAAGGCTCCCTGTGCAGAAACTCTT
GCTGATATTGCTTCCCATTGCAATGAAAGAAAGTTGGCTTGCAGGCACGTGAAAGATGCT
ATGGAGAAACTCTACATGTGGGTACTTCTAAAAAGAAAGGAGATATTGTTCTCAGAAGCA
AGAGTTATGGGTTTGGGACCACGATTCATGTCATTATACATCCACAAGCTTGCTACTGAA
CAGCGCATATATTATGATGAAGTTGAGGGACTGACTGTGGAGTGGCTTGAGGCTACTTCA
ACATTGGTACTTAGTCCGTCTACAAATAAGCGCTTTAACAGGAGGGGTAGTCCAGGGAAG
TGCAGATCACTTGAAGAAGTAGCACTCATTCTTAGCCCATGTGAACTGAACCAAGAACTG
GATTTATGTGGACCAAATAATCGGGAAGGGAGCGGTGTGTTACAAATTGGAAATGCTTCA
AAATCTTGTCTTCCTGGTATACCAAAGATCGAACCTGCTGTTTTCCCTGTGACTCTGCGA
CTTCTTTCAACAATCACTGTTGCTCTACACGCTATTGGAGGAGGGTATGGCCCCCTTGAT
ATTGGGGCAAGGCTGTTTATTAGTTCATATTTCAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001717
PEP Infomation

pacid=37465746 transcript=PGSC0003DMT400002367 locus=PGSC0003DMG400000905 ID=PGSC0003DMT400002367.v4.03 annot-version=v4.03
Sequence

MGVLVAESGENQNQTAVVVDKKKNRRSRRSKQNSPPTASSSLTGCLGESNFKGGVPILNH
EGSKEFSLPRASDIAFTSLPTMRLNEQAAETESLPVQLTFSPGVGGQVYSGSCPDYIAYG
DQSITSYPQRKYFCSHWPAEAVHKAVERGHVFKALFRVNAHNRLEAYCKVDGVRTDVLIS
GAAAQNRAVEGDIVAVEVDPPSLWTRMKGYTVGVESSTLVDDGMLESDNSDFVRECCKGK
NKVDTDYEFSSFGNCSSPLESVLGYRSGQSFGDISHPEEKVPAENDYVNRHNMTAPKPSM
VGCYSEINDAMHATERLSAAVDSFPSKRPTGRVVAILEGSPRRDTIVGFLNVKKWMWSRE
GNKKDLKKNKYLSTALNCQYLLLTPNDPRLPKMMVPFKSLPDLILKRLEAGDVAVEMDLV
AARIADWAEENYIPEAHVTDIFGRGGELEPQLAATLYENAIDSSEFCQQTLSCLPSIPWE
IPKEELQSRRDIRNLCVFTIDPATATDLDDALSVERLPDGIFRVGVHIADVSYFVLPDSA
LDEIAQARSTSVYLLQSKLPMLPPLLSENLGSLNPGVDRLAFSIFWDINQSGEFIQRWIG
RTIIQSCCKLSYDHAQDIIDGLLDNPSSYKGEHSWPVLHGLFKWSDVVTSVKNLYEISKI
LKKKRFEDGALSLESPKIVFLFDEEGIPYDSVLSGRKESNMLVEEFMLLANRTAAEVITR
AYPSSALLRRHPEPNPRKLREFESFCSKHGLRLDTTSSGQIHNSLECIRRELADDSVLTD
ILMSYAARPMQLATYFCSGDVEDENDRGHYALAVPLYTHFTSPLRRYPDILVHRMLAAAV
EAEEVYLKLKLLQNPDRGEMRRQRCLTDVYFNKDAIESPEAQEALSAAASKHKAPCAETL
ADIASHCNERKLACRHVKDAMEKLYMWVLLKRKEILFSEARVMGLGPRFMSLYIHKLATE
QRIYYDEVEGLTVEWLEATSTLVLSPSTNKRFNRRGSPGKCRSLEEVALILSPCELNQEL
DLCGPNNREGSGVLQIGNASKSCLPGIPKIEPAVFPVTLRLLSTITVALHAIGGGYGPLD
IGARLFISSYFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400002367
Transcript Infomation

pacid=37465746 locus=PGSC0003DMG400000905 ID=PGSC0003DMT400002367.v4.03 annot-version=v4.03
Sequence

ATGGGTGTACTGGTTGCGGAGTCTGGGGAAAATCAGAATCAGACTGCTGTAGTTGTTGAT
AAGAAGAAAAACCGTCGATCTAGACGATCTAAGCAAAATTCTCCTCCAACAGCAAGTAGT
TCGCTGACTGGCTGTCTTGGGGAATCAAATTTTAAGGGAGGTGTTCCCATCTTGAATCAC
GAAGGATCTAAAGAGTTTTCATTGCCTAGAGCATCAGACATTGCCTTTACTTCCTTGCCC
ACAATGCGTTTAAATGAACAGGCAGCAGAGACTGAAAGTCTCCCTGTGCAGCTAACGTTT
TCACCGGGTGTTGGTGGACAAGTATATTCAGGTTCATGCCCAGACTATATTGCTTATGGT
GACCAGTCAATTACTTCTTACCCACAGAGGAAATATTTTTGTTCACATTGGCCAGCAGAA
GCCGTTCATAAAGCAGTGGAGAGGGGTCATGTCTTTAAAGCATTATTTCGTGTCAATGCC
CACAATAGACTTGAGGCCTATTGTAAAGTTGATGGTGTGCGAACAGATGTTCTTATTAGT
GGAGCTGCAGCTCAAAACAGAGCCGTTGAAGGAGACATTGTTGCTGTTGAAGTTGATCCT
CCTTCTCTTTGGACTAGAATGAAAGGATATACAGTTGGTGTTGAGAGTTCCACTTTGGTA
GATGATGGTATGTTGGAGTCTGACAATTCAGACTTTGTCAGAGAGTGTTGCAAAGGGAAG
AACAAGGTAGACACAGATTATGAGTTCAGTAGTTTTGGAAATTGTTCTAGCCCCTTGGAA
AGTGTGTTAGGTTATAGAAGTGGGCAGTCCTTTGGAGACATTTCACATCCTGAAGAAAAG
GTACCTGCGGAGAATGATTATGTCAATAGACATAATATGACTGCTCCGAAACCTTCCATG
GTTGGGTGCTATAGTGAAATAAATGATGCTATGCATGCAACAGAGAGATTGTCAGCTGCT
GTGGATTCATTCCCATCTAAACGACCAACAGGCAGGGTTGTGGCTATCCTTGAAGGGTCA
CCTCGTCGGGACACTATTGTCGGTTTTCTCAATGTCAAGAAGTGGATGTGGAGTAGAGAA
GGTAACAAAAAGGACTTGAAGAAGAATAAATATTTATCGACTGCCTTGAACTGTCAATAT
CTCTTGTTAACACCAAATGATCCTCGGCTTCCGAAAATGATGGTGCCGTTTAAGAGCCTG
CCAGACCTCATTTTGAAAAGATTGGAAGCTGGTGATGTGGCAGTGGAGATGGACCTAGTA
GCCGCACGGATTGCAGACTGGGCAGAAGAGAACTATATCCCTGAAGCTCATGTCACTGAC
ATATTTGGACGAGGTGGAGAACTGGAGCCACAGCTTGCTGCAACCTTATATGAAAATGCA
ATTGATTCTTCAGAATTCTGTCAACAGACCCTATCATGTCTTCCAAGTATCCCATGGGAA
ATACCTAAAGAGGAGCTTCAGAGTAGAAGAGACATCAGAAATTTGTGTGTTTTTACAATT
GACCCTGCTACTGCCACCGATCTTGATGATGCACTGTCTGTTGAAAGGTTGCCTGACGGT
ATTTTTAGAGTTGGGGTTCATATAGCTGATGTCTCGTACTTTGTTCTACCAGACTCAGCT
TTAGATGAAATTGCCCAAGCGAGGTCAACAAGTGTGTATTTGTTGCAAAGTAAATTGCCA
ATGTTGCCCCCATTGCTCTCTGAGAATCTGGGTTCGCTTAATCCTGGTGTGGACAGACTT
GCTTTTTCTATTTTTTGGGACATCAATCAATCTGGGGAATTTATTCAGCGCTGGATTGGC
CGCACTATAATTCAATCTTGTTGCAAGCTCTCATATGATCATGCTCAGGATATTATTGAT
GGGTTGCTTGATAATCCAAGTTCTTATAAAGGAGAACATTCTTGGCCAGTGTTGCATGGC
CTTTTTAAATGGTCTGATGTTGTTACATCTGTCAAGAACCTTTATGAAATCTCTAAAATC
TTGAAGAAAAAGAGGTTTGAAGATGGGGCACTGTCACTCGAAAGTCCCAAAATAGTTTTC
TTATTTGATGAAGAAGGGATACCTTATGATAGTGTGCTCAGTGGAAGGAAGGAGTCAAAC
ATGCTTGTTGAGGAGTTTATGCTTTTGGCCAACAGGACAGCTGCTGAAGTTATAACTAGA
GCTTATCCTTCCAGTGCACTATTGCGAAGGCACCCTGAACCCAACCCGCGTAAGCTCAGA
GAGTTTGAGTCCTTCTGCTCTAAACATGGTCTGAGATTGGACACTACTTCTTCTGGCCAG
ATTCATAATTCGTTGGAGTGCATTAGACGAGAGCTTGCGGATGATTCTGTGTTAACAGAT
ATTCTTATGTCTTACGCTGCAAGACCCATGCAATTGGCAACTTACTTCTGCAGTGGCGAT
GTAGAAGATGAAAATGATAGGGGTCATTATGCCCTTGCTGTTCCTTTATACACACACTTT
ACTTCTCCGCTCCGGCGCTATCCGGATATTCTGGTGCATCGGATGCTTGCTGCAGCTGTA
GAAGCTGAAGAGGTGTATCTGAAGCTCAAGTTGTTGCAAAATCCAGATCGGGGAGAAATG
AGACGCCAAAGATGTTTGACCGATGTATACTTCAATAAAGATGCAATTGAATCACCTGAA
GCTCAAGAAGCATTATCTGCAGCAGCATCAAAACATAAGGCTCCCTGTGCAGAAACTCTT
GCTGATATTGCTTCCCATTGCAATGAAAGAAAGTTGGCTTGCAGGCACGTGAAAGATGCT
ATGGAGAAACTCTACATGTGGGTACTTCTAAAAAGAAAGGAGATATTGTTCTCAGAAGCA
AGAGTTATGGGTTTGGGACCACGATTCATGTCATTATACATCCACAAGCTTGCTACTGAA
CAGCGCATATATTATGATGAAGTTGAGGGACTGACTGTGGAGTGGCTTGAGGCTACTTCA
ACATTGGTACTTAGTCCGTCTACAAATAAGCGCTTTAACAGGAGGGGTAGTCCAGGGAAG
TGCAGATCACTTGAAGAAGTAGCACTCATTCTTAGCCCATGTGAACTGAACCAAGAACTG
GATTTATGTGGACCAAATAATCGGGAAGGGAGCGGTGTGTTACAAATTGGAAATGCTTCA
AAATCTTGTCTTCCTGGTATACCAAAGATCGAACCTGCTGTTTTCCCTGTGACTCTGCGA
CTTCTTTCAACAATCACTGTTGCTCTACACGCTATTGGAGGAGGGTATGGCCCCCTTGAT
ATTGGGGCAAGGCTGTTTATTAGTTCATATTTCAAGTAA