Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002347
CDS Infomation

pacid=37466088 polypeptide=PGSC0003DMP400001700 locus=PGSC0003DMG400000896 ID=PGSC0003DMT400002347.v4.03 annot-version=v4.03
Sequence

ATGGTTATTGAGATGGAAAAGAGGAAATGGTTGTGGAAAAGGAGACCTTTCGATAAGAGC
CCTGGTGAAACGGAGAGTTCTGGTTCTTTGTCTTCATATTCGGAGAGATACTCTGATGAG
CAGGATGCACTAAAAGAATTTCCTGACCATGACAAGCAGTCACCAGAGGTAACCTCAAAA
GCTGCATCCATTGATGATGAATCCAAGGAAAGCTTGAGATGCTTGACAGAGAAATTATCA
GCTGCTCTTGTTAATGTTAGCGCCAAAGAAGACTTAGTTAAGCAGCATGCTAAAGTTGCT
GAAGAAGCTATTGCAGGTTGGGAAAAGGCAGAAAATGAAGTTGCAGTTCTAAAGCAACAA
CTAGATGCAGCTGTGCAGCAGAACTTGACTTTGGAAGTTCGTGTCAGTCATCTCGATGGT
GCACTCAAGGAATGTGTCAGGCAGTTGAGACAAGCTAGAGATGAGCAAGAGAAAATGATT
CAAGATGCTATGGCAGAAAAAAATGAATTGGAATCTGAAAAAACTGCACTTGAGAAACAG
CTACTTAAGCTCCAGACACAAGAGGAGGCTGGTAAAGCTGAAATGCCTACTTCTACTGAT
GCTGATATCCTTGTCCGGCTCAAGTATCTAGAGAAAGAGAACACAGCTCTCAAAATTGAA
CTTCTCTCTTGTTCAGAAGTGTTGGAAATTAGGACTATTGAGAGGGATTTGAGCACTCAA
GCAGCAGAAACTGCCAGCAAGCAGCAGCTGGAAAGCATAAAAAAGCTGACCAAACTTGAA
GCTGAGTGTCGAAAGCTACAGGCCATGGCTCGCAAATCATCCCCATTCAATGATCAACGC
TCCTCTGCTGTTTCATCTTTCTATGTGGACTCTGTCACCGATAGTCAGTCTGACAGTGGA
GAGCGGTTAAACACAGTCGACAATGATGCCCTCAAGATGAGTAAACTGGAAACAAGAGAA
TATGAACCAAGTTGCTCAAATTCATGGGCTTCAGCACTCATTGCTGAGCTTGATCAATTT
AAGAATGAAAAGGCCATGCCCAAAACTCTTGCTGCCTGTTCTATAGAAATCGATATGATG
GATGATTTCTTGGAGATGGAGCAACTTGCTGCATTATCTGAAACTGCAAACAAGACACCT
TCAGTAGCATCTGATGTTGTTCCTCATGATTCCCCCAATATTGAGAACCCTTTGGCAGCA
GAATACAATTCCATTACACAAAGGGTGGCCGAATTAGAACAAAAGCTGGAGAAGATTGAA
GCAGAGAAAACTGAACTGGAGAATGCTTTAAATGAGAGTCAAGATGCCCTTAAAGTGTCC
TCTTTGCAGCTTAAGGAAACTCAAACCAGGTTGGAAGGCCTGCAGAAGGAGCTAGATGTG
GTAAATGAGTCAAAGGAGTTGCTCGAGTTTCAACTCTATGGCATGGAGGTAGAAGCACGG
ACGATGTCTGTAAATATTGATTCTTTGAAGACAGAAGTTGAAAGAGAAAAATCCTTGTCA
TCAGACATGGAAGCTAAGTGTCGTGAATTGGAAAACGAGCTTAGAAAAAGAGCCCAGGAT
GCTGAAGCTCAGCAAACTTCTAGTTCAAATGGTGAATTCAAAATAAAACAGCAGGAGGAT
TTAGCAGTGGCTGCTGACAAGCTTGCAGAATGCCAGAAAACAATTGCATCCCTTGGGAAA
CAGCTACAATCCCTAGCTACTCTAGAAGATTTCCTGATAGACACTGCAAATCTTCCTGGT
GGAGGATCAGTTGTTGCTAAAGCAGGAGGAGAACTATGGAAGTTGCATGTAAACGAGACA
TTTACCCCAAAACGTGATTCTGATCCTACCAAGGTTGAGGAAGAGAATGTGAGTCATTCT
ACAAACGGAAATGAAGGGGAATCTCCAGCATCCTCATCTTCATCATCTACTTCATCCACT
ACTCAGGCTAGCACTAGCAAAAGCAAAAATGGCTTTGGGAAGTTGTTTTCTCGGAGTAAG
AGTGGAGTTCCAGCTCTAAAAGTTATTGAGGATAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001700
PEP Infomation

pacid=37466088 transcript=PGSC0003DMT400002347 locus=PGSC0003DMG400000896 ID=PGSC0003DMT400002347.v4.03 annot-version=v4.03
Sequence

MVIEMEKRKWLWKRRPFDKSPGETESSGSLSSYSERYSDEQDALKEFPDHDKQSPEVTSK
AASIDDESKESLRCLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKQQ
LDAAVQQNLTLEVRVSHLDGALKECVRQLRQARDEQEKMIQDAMAEKNELESEKTALEKQ
LLKLQTQEEAGKAEMPTSTDADILVRLKYLEKENTALKIELLSCSEVLEIRTIERDLSTQ
AAETASKQQLESIKKLTKLEAECRKLQAMARKSSPFNDQRSSAVSSFYVDSVTDSQSDSG
ERLNTVDNDALKMSKLETREYEPSCSNSWASALIAELDQFKNEKAMPKTLAACSIEIDMM
DDFLEMEQLAALSETANKTPSVASDVVPHDSPNIENPLAAEYNSITQRVAELEQKLEKIE
AEKTELENALNESQDALKVSSLQLKETQTRLEGLQKELDVVNESKELLEFQLYGMEVEAR
TMSVNIDSLKTEVEREKSLSSDMEAKCRELENELRKRAQDAEAQQTSSSNGEFKIKQQED
LAVAADKLAECQKTIASLGKQLQSLATLEDFLIDTANLPGGGSVVAKAGGELWKLHVNET
FTPKRDSDPTKVEEENVSHSTNGNEGESPASSSSSSTSSTTQASTSKSKNGFGKLFSRSK
SGVPALKVIEDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400002347
Transcript Infomation

pacid=37466088 locus=PGSC0003DMG400000896 ID=PGSC0003DMT400002347.v4.03 annot-version=v4.03
Sequence

ATGGTTATTGAGATGGAAAAGAGGAAATGGTTGTGGAAAAGGAGACCTTTCGATAAGAGC
CCTGGTGAAACGGAGAGTTCTGGTTCTTTGTCTTCATATTCGGAGAGATACTCTGATGAG
CAGGATGCACTAAAAGAATTTCCTGACCATGACAAGCAGTCACCAGAGGTAACCTCAAAA
GCTGCATCCATTGATGATGAATCCAAGGAAAGCTTGAGATGCTTGACAGAGAAATTATCA
GCTGCTCTTGTTAATGTTAGCGCCAAAGAAGACTTAGTTAAGCAGCATGCTAAAGTTGCT
GAAGAAGCTATTGCAGGTTGGGAAAAGGCAGAAAATGAAGTTGCAGTTCTAAAGCAACAA
CTAGATGCAGCTGTGCAGCAGAACTTGACTTTGGAAGTTCGTGTCAGTCATCTCGATGGT
GCACTCAAGGAATGTGTCAGGCAGTTGAGACAAGCTAGAGATGAGCAAGAGAAAATGATT
CAAGATGCTATGGCAGAAAAAAATGAATTGGAATCTGAAAAAACTGCACTTGAGAAACAG
CTACTTAAGCTCCAGACACAAGAGGAGGCTGGTAAAGCTGAAATGCCTACTTCTACTGAT
GCTGATATCCTTGTCCGGCTCAAGTATCTAGAGAAAGAGAACACAGCTCTCAAAATTGAA
CTTCTCTCTTGTTCAGAAGTGTTGGAAATTAGGACTATTGAGAGGGATTTGAGCACTCAA
GCAGCAGAAACTGCCAGCAAGCAGCAGCTGGAAAGCATAAAAAAGCTGACCAAACTTGAA
GCTGAGTGTCGAAAGCTACAGGCCATGGCTCGCAAATCATCCCCATTCAATGATCAACGC
TCCTCTGCTGTTTCATCTTTCTATGTGGACTCTGTCACCGATAGTCAGTCTGACAGTGGA
GAGCGGTTAAACACAGTCGACAATGATGCCCTCAAGATGAGTAAACTGGAAACAAGAGAA
TATGAACCAAGTTGCTCAAATTCATGGGCTTCAGCACTCATTGCTGAGCTTGATCAATTT
AAGAATGAAAAGGCCATGCCCAAAACTCTTGCTGCCTGTTCTATAGAAATCGATATGATG
GATGATTTCTTGGAGATGGAGCAACTTGCTGCATTATCTGAAACTGCAAACAAGACACCT
TCAGTAGCATCTGATGTTGTTCCTCATGATTCCCCCAATATTGAGAACCCTTTGGCAGCA
GAATACAATTCCATTACACAAAGGGTGGCCGAATTAGAACAAAAGCTGGAGAAGATTGAA
GCAGAGAAAACTGAACTGGAGAATGCTTTAAATGAGAGTCAAGATGCCCTTAAAGTGTCC
TCTTTGCAGCTTAAGGAAACTCAAACCAGGTTGGAAGGCCTGCAGAAGGAGCTAGATGTG
GTAAATGAGTCAAAGGAGTTGCTCGAGTTTCAACTCTATGGCATGGAGGTAGAAGCACGG
ACGATGTCTGTAAATATTGATTCTTTGAAGACAGAAGTTGAAAGAGAAAAATCCTTGTCA
TCAGACATGGAAGCTAAGTGTCGTGAATTGGAAAACGAGCTTAGAAAAAGAGCCCAGGAT
GCTGAAGCTCAGCAAACTTCTAGTTCAAATGGTGAATTCAAAATAAAACAGCAGGAGGAT
TTAGCAGTGGCTGCTGACAAGCTTGCAGAATGCCAGAAAACAATTGCATCCCTTGGGAAA
CAGCTACAATCCCTAGCTACTCTAGAAGATTTCCTGATAGACACTGCAAATCTTCCTGGT
GGAGGATCAGTTGTTGCTAAAGCAGGAGGAGAACTATGGAAGTTGCATGTAAACGAGACA
TTTACCCCAAAACGTGATTCTGATCCTACCAAGGTTGAGGAAGAGAATGTGAGTCATTCT
ACAAACGGAAATGAAGGGGAATCTCCAGCATCCTCATCTTCATCATCTACTTCATCCACT
ACTCAGGCTAGCACTAGCAAAAGCAAAAATGGCTTTGGGAAGTTGTTTTCTCGGAGTAAG
AGTGGAGTTCCAGCTCTAAAAGTTATTGAGGATAAATAA