Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002345
CDS Infomation

pacid=37465528 polypeptide=PGSC0003DMP400001698 locus=PGSC0003DMG402000895 ID=PGSC0003DMT400002345.v4.03 annot-version=v4.03
Sequence

ATGACAGCCATTGCTACTGCTACTGCTATTTCTCTTTCTCTTCCTTTCTCTTTGTGCCGC
TCTAACAAGTCTTATACTAGAAAGTTTGTCAAAGGGAGTTTTGGAGTATTTGCAGTGTAT
GGGGAGGAGGGTGGGATTCCAGATAAGAAAAGTTCCTGGTTGACACTCTTTAATGTGGAA
GATCCCAGGACTAAAGTTCCACAAAGTAAAGGCAAGTTCTTGGATGCAAATCAAGCTTTA
GAAGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACT
ATAATGCTCCTACACGAAAAGGTTGTGGAAGTACTAAACCCTCTAGCACGCGATTATAAA
TCTATTGGAACCATGAAAAAGGAACTTGCAGAGTTGCAAGAAGAACTTTCTCAGGCCCAC
AACCAGGTACATATATCAGAGACTCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATG
GAAGAGCTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTAGAATCAGAATGCACG
TCTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCTAAAAGCAAGCAACCCCGA
AGAACGCTGAATGTCTCAGGTCCTGTTAAAGATTACAGTTCCCGTTTGAAGAACTTTTGG
TACCCTGTAGCATTCTCCGCAGATCTTAAGGATGACACCATGTTACCGATTGATTGCTTT
GAGCAATCGTGGGTGATCTTTCGTGGGGCTGATGGAAAACCTGGATGTGTCCGGAATACA
TGTGCACATAGAGCCTGCCCCCTTGATCTTGGCTCAGTGAATGAGGGTCGCATCCAATGC
CCTTATCATGGATGGGAGTATTCCACTGACGGGAAGTGTGAGAAAATGCCATCAACAAGA
TTACTGAATGTAAAGATCAAAGCACTGCCCTGCTTTGAGCAAGAGGGAATGATATGGATT
TGGCCAGGAAATGATCCACCTGCAGCTACCCTTCCTTCTTTACTACCACCTTCTGGATTT
CAGATCCATGCAGAGATAGTCATGGAACTTCCGGTGGAACATGGACTACTTTTAGACAAT
CTTTTAGATCTTGCACATGCACCTTTCACTCATACATCAACTTTTGCTAAAGGATGGAGT
GTACCAAGCTTGGTAAAGTTCTTGACTCCTGCATCTGGTCTGCAAGGATATTGGGATCCA
TATCCAATAGATATGGAATTTAGACCACCTTGTATGGTTTTATCCACCATTGGCATCTCA
AAGCCAGGCAAATTGGAGGGACAGAGCACCAAGCAGTGTTCTACGCACCTTCATCAACTG
CATGTTTGCTTACCTGCATCACGACAGAAGACACGGTTATTATATAGAATGTCACTGGAT
TTTGCTCCCCTGCTGAAACACATCCCCTTCATGCAATACGTTTGGAGACATTTTGCTGAG
CAGGTTTTAAATGAAGACTTACGGCTTGTTCTTGGCCAGCAGGATCGCATGCTCAATGGC
GCCAATATTTGGAACCTGCCAGTGTCTTATGATAAGCTAGGTGTGAGGTATAGAATATGG
AGAGATGCTGTAGATAGTGGAGAAAAGGAACTACCTTTCAGCAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001698
PEP Infomation

pacid=37465528 transcript=PGSC0003DMT400002345 locus=PGSC0003DMG402000895 ID=PGSC0003DMT400002345.v4.03 annot-version=v4.03
Sequence

MTAIATATAISLSLPFSLCRSNKSYTRKFVKGSFGVFAVYGEEGGIPDKKSSWLTLFNVE
DPRTKVPQSKGKFLDANQALEVARYDLQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK
SIGTMKKELAELQEELSQAHNQVHISETRVSAALDKLAYMEELVNDRLLQERSTVESECT
SSSASTSTGLLDTPKSKQPRRTLNVSGPVKDYSSRLKNFWYPVAFSADLKDDTMLPIDCF
EQSWVIFRGADGKPGCVRNTCAHRACPLDLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTR
LLNVKIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIHAEIVMELPVEHGLLLDN
LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
KPGKLEGQSTKQCSTHLHQLHVCLPASRQKTRLLYRMSLDFAPLLKHIPFMQYVWRHFAE
QVLNEDLRLVLGQQDRMLNGANIWNLPVSYDKLGVRYRIWRDAVDSGEKELPFSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400002345
Transcript Infomation

pacid=37465528 locus=PGSC0003DMG402000895 ID=PGSC0003DMT400002345.v4.03 annot-version=v4.03
Sequence

ATGACAGCCATTGCTACTGCTACTGCTATTTCTCTTTCTCTTCCTTTCTCTTTGTGCCGC
TCTAACAAGTCTTATACTAGAAAGTTTGTCAAAGGGAGTTTTGGAGTATTTGCAGTGTAT
GGGGAGGAGGGTGGGATTCCAGATAAGAAAAGTTCCTGGTTGACACTCTTTAATGTGGAA
GATCCCAGGACTAAAGTTCCACAAAGTAAAGGCAAGTTCTTGGATGCAAATCAAGCTTTA
GAAGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACT
ATAATGCTCCTACACGAAAAGGTTGTGGAAGTACTAAACCCTCTAGCACGCGATTATAAA
TCTATTGGAACCATGAAAAAGGAACTTGCAGAGTTGCAAGAAGAACTTTCTCAGGCCCAC
AACCAGGTACATATATCAGAGACTCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATG
GAAGAGCTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTAGAATCAGAATGCACG
TCTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCTAAAAGCAAGCAACCCCGA
AGAACGCTGAATGTCTCAGGTCCTGTTAAAGATTACAGTTCCCGTTTGAAGAACTTTTGG
TACCCTGTAGCATTCTCCGCAGATCTTAAGGATGACACCATGTTACCGATTGATTGCTTT
GAGCAATCGTGGGTGATCTTTCGTGGGGCTGATGGAAAACCTGGATGTGTCCGGAATACA
TGTGCACATAGAGCCTGCCCCCTTGATCTTGGCTCAGTGAATGAGGGTCGCATCCAATGC
CCTTATCATGGATGGGAGTATTCCACTGACGGGAAGTGTGAGAAAATGCCATCAACAAGA
TTACTGAATGTAAAGATCAAAGCACTGCCCTGCTTTGAGCAAGAGGGAATGATATGGATT
TGGCCAGGAAATGATCCACCTGCAGCTACCCTTCCTTCTTTACTACCACCTTCTGGATTT
CAGATCCATGCAGAGATAGTCATGGAACTTCCGGTGGAACATGGACTACTTTTAGACAAT
CTTTTAGATCTTGCACATGCACCTTTCACTCATACATCAACTTTTGCTAAAGGATGGAGT
GTACCAAGCTTGGTAAAGTTCTTGACTCCTGCATCTGGTCTGCAAGGATATTGGGATCCA
TATCCAATAGATATGGAATTTAGACCACCTTGTATGGTTTTATCCACCATTGGCATCTCA
AAGCCAGGCAAATTGGAGGGACAGAGCACCAAGCAGTGTTCTACGCACCTTCATCAACTG
CATGTTTGCTTACCTGCATCACGACAGAAGACACGGTTATTATATAGAATGTCACTGGAT
TTTGCTCCCCTGCTGAAACACATCCCCTTCATGCAATACGTTTGGAGACATTTTGCTGAG
CAGGTTTTAAATGAAGACTTACGGCTTGTTCTTGGCCAGCAGGATCGCATGCTCAATGGC
GCCAATATTTGGAACCTGCCAGTGTCTTATGATAAGCTAGGTGTGAGGTATAGAATATGG
AGAGATGCTGTAGATAGTGGAGAAAAGGAACTACCTTTCAGCAAATAA