Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002281
CDS Infomation

pacid=37440106 polypeptide=PGSC0003DMP400001658 locus=PGSC0003DMG400000872 ID=PGSC0003DMT400002281.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTGTTTAGGTTCATCAGCTAGAGTTGATGCCAGTCTCAGCTCTCACAATATT
TCTGCTTCTGGAGCCTCTAGGATTCCCAGCAGGACCAGTCATTCTTCTGTTCTATCAAGT
CTAAGTATTCCGTCTTATAGTCGGAAAAGCAGTGTTGATACCCTTTCTACTCCAAGATCT
GAAGGCGAGATTTTGTTTTCTCCCAATGTTAAGTCCTTCTCATTTAATGAATTGAAAAGT
GCAACAAGGAACTTTAGACCTGACAGTCTTCTTGGCGAAGGAGGATTTGGTTATGTTTTC
AAAGGATGGATTGATGAACATACTCTTACTGCTGCAAAGCCTGGTTCTGGAATGGTCATT
GCGGTCAAGAAGTTAAAGCCAGAAGGTTTTCAGGGTCACAAGGAGTGGGTGACTGAAGTT
AATTACCTCGGCCAACTTCGTCATCCAAACCTGGTTAAACTCGTTGGGTATTGTATAGAG
GGAGATGACCGACTATTGGTGTATGAGTTCATGCCTAAAGGAAGCTTGGAGAATCATTTA
TTTCGAAGAGGGCCTCAACCTCTTACTTGGTTGACAAGAATTAAGGTGGCTATTGGTGCT
GCTAGAGGCCTTGCTTTCCTACATGATGCTAAAGAACAAGTTATATATCGGGATTTTAAG
GCTTCTAATATTCTCTTAGACGGGGAATTTAATGCAAAGTTGTCTGATTTTGGTTTAGCC
AAGGCCGGCCCAACTGGTGATCGCACTCATGTGTCCACTCAAGTCATCGGTACACAGGGC
TATGCTGCTCCAGAATATGTTGCTACAGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001658
PEP Infomation

pacid=37440106 transcript=PGSC0003DMT400002281 locus=PGSC0003DMG400000872 ID=PGSC0003DMT400002281.v4.03 annot-version=v4.03
Sequence

MGNCLGSSARVDASLSSHNISASGASRIPSRTSHSSVLSSLSIPSYSRKSSVDTLSTPRS
EGEILFSPNVKSFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDEHTLTAAKPGSGMVI
AVKKLKPEGFQGHKEWVTEVNYLGQLRHPNLVKLVGYCIEGDDRLLVYEFMPKGSLENHL
FRRGPQPLTWLTRIKVAIGAARGLAFLHDAKEQVIYRDFKASNILLDGEFNAKLSDFGLA
KAGPTGDRTHVSTQVIGTQGYAAPEYVATG*

Transcript Sequence

Transcript ID

PGSC0003DMT400002281
Transcript Infomation

pacid=37440106 locus=PGSC0003DMG400000872 ID=PGSC0003DMT400002281.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTGTTTAGGTTCATCAGCTAGAGTTGATGCCAGTCTCAGCTCTCACAATATT
TCTGCTTCTGGAGCCTCTAGGATTCCCAGCAGGACCAGTCATTCTTCTGTTCTATCAAGT
CTAAGTATTCCGTCTTATAGTCGGAAAAGCAGTGTTGATACCCTTTCTACTCCAAGATCT
GAAGGCGAGATTTTGTTTTCTCCCAATGTTAAGTCCTTCTCATTTAATGAATTGAAAAGT
GCAACAAGGAACTTTAGACCTGACAGTCTTCTTGGCGAAGGAGGATTTGGTTATGTTTTC
AAAGGATGGATTGATGAACATACTCTTACTGCTGCAAAGCCTGGTTCTGGAATGGTCATT
GCGGTCAAGAAGTTAAAGCCAGAAGGTTTTCAGGGTCACAAGGAGTGGGTGACTGAAGTT
AATTACCTCGGCCAACTTCGTCATCCAAACCTGGTTAAACTCGTTGGGTATTGTATAGAG
GGAGATGACCGACTATTGGTGTATGAGTTCATGCCTAAAGGAAGCTTGGAGAATCATTTA
TTTCGAAGAGGGCCTCAACCTCTTACTTGGTTGACAAGAATTAAGGTGGCTATTGGTGCT
GCTAGAGGCCTTGCTTTCCTACATGATGCTAAAGAACAAGTTATATATCGGGATTTTAAG
GCTTCTAATATTCTCTTAGACGGGGAATTTAATGCAAAGTTGTCTGATTTTGGTTTAGCC
AAGGCCGGCCCAACTGGTGATCGCACTCATGTGTCCACTCAAGTCATCGGTACACAGGGC
TATGCTGCTCCAGAATATGTTGCTACAGGTTAA