Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002254
CDS Infomation

pacid=37439959 polypeptide=PGSC0003DMP400001644 locus=PGSC0003DMG400000861 ID=PGSC0003DMT400002254.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGCGAAAATTACAGAAAATACGTCGAAACTTGCAAGCTATGATGCTTATTTT
GAAATGGTCCAGAGAAGAAAGAAATTACCCCGTAATTTACAGGAAACTTTGACTGATGCA
TTTGCAAATATTCCAGTTTCATCCTTCCCTCAAGTCCCTGGAGGCAAAGTGATTGAAATA
GACGCCGAGACTTCTATAGGCGATGCTGTTAAAATTCTTTCAGAATCCAACATCCTCTCA
GTTCCTGTGAAGAATCGAGCTGCTCAGAATAGTTTGGATTGGAGAGAAAGGTACTTAGGC
GTCCTTGATTACTCCGCTATTGTTCTTTGGGTGCTGGAGGGTGCGGAAACAGCAGCAGCT
GCCATATCAGCAAGTTCAGCAGCAGCAGCCGGGGTTGGAGCAGGTACTGTTGGTGCTCTT
GGAGCACTGGCATTAGGTGCAACAGGTCCTGCTGCAGTTGCTGGTCTAACGGTTGCTGCA
GTCGGTGCAGCTGTGGCAGGTGGAGTGGCTGCAGATCGAGGAGCAGGAAAGGATGCTCCA
ACTGCAGCTGATACGTTGGGTGAGGATTTCTACAAAGTTATCCTTCAAGAAGAACCCTTT
AAGTCAACAAAGGTGAGCTCCATCATAAAATCCTATCGGTGGGCACCATTTGTTCCAGTA
GCAATGGACAGTTCTATGTTGAGTGTGTTGCTGCTGTTGTCAAAATATAGGCTGCGGAAC
GTACCAGTGATAGAAAGGGGAAGTCCATACCTTAAGAACTTTATAACTCAATCAGCCGTG
GTACGGGGTCTTGTAGGATGCAAAGGGAGGGATTGGTTTGACTGCATCTCCGCTCACCCT
ATATCAGAACTTGGCCTCCCATACATGTCCGCTGACGAGGTTATTAGTGTCCGAGACGAT
GAGCTGATTCTGGAAGCATTCAAGAAAATGAGAGATAATAATATCGGAGGTCTGCCAGTT
GTTGAAGGACCAAAGAAGAAAATAGTTGGCAATGTAAGCATAAGAGACATCAGATTCTTG
TTACTCAAACCTGAACTATTCTCCAATTTCAGGCAGCTGACAGTTGCGGGCTTCATGAAC
ACCGTTGCTTCGGCAACCCATGATGCCACAAAGGCTGCTACACCAATAACATGCAAGCTC
GGTTCAACTCTTTGTACTGTGATAGACACTCTCGCGTCCAAGTTAGTTCACAGGATCTAC
GTGACAGCTGAGGATGGTGATGAAGTAGTTGGTGTGATTACGCTCAGAGATGTCATTTCT
TGCTTCATCTATGAACCACCAAACTTTTTTGATAACTATTTTGGATTTTCTGCACAAGAA
ATGCTTGGGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001644
PEP Infomation

pacid=37439959 transcript=PGSC0003DMT400002254 locus=PGSC0003DMG400000861 ID=PGSC0003DMT400002254.v4.03 annot-version=v4.03
Sequence

MAQAKITENTSKLASYDAYFEMVQRRKKLPRNLQETLTDAFANIPVSSFPQVPGGKVIEI
DAETSIGDAVKILSESNILSVPVKNRAAQNSLDWRERYLGVLDYSAIVLWVLEGAETAAA
AISASSAAAAGVGAGTVGALGALALGATGPAAVAGLTVAAVGAAVAGGVAADRGAGKDAP
TAADTLGEDFYKVILQEEPFKSTKVSSIIKSYRWAPFVPVAMDSSMLSVLLLLSKYRLRN
VPVIERGSPYLKNFITQSAVVRGLVGCKGRDWFDCISAHPISELGLPYMSADEVISVRDD
ELILEAFKKMRDNNIGGLPVVEGPKKKIVGNVSIRDIRFLLLKPELFSNFRQLTVAGFMN
TVASATHDATKAATPITCKLGSTLCTVIDTLASKLVHRIYVTAEDGDEVVGVITLRDVIS
CFIYEPPNFFDNYFGFSAQEMLGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400002254
Transcript Infomation

pacid=37439959 locus=PGSC0003DMG400000861 ID=PGSC0003DMT400002254.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGCGAAAATTACAGAAAATACGTCGAAACTTGCAAGCTATGATGCTTATTTT
GAAATGGTCCAGAGAAGAAAGAAATTACCCCGTAATTTACAGGAAACTTTGACTGATGCA
TTTGCAAATATTCCAGTTTCATCCTTCCCTCAAGTCCCTGGAGGCAAAGTGATTGAAATA
GACGCCGAGACTTCTATAGGCGATGCTGTTAAAATTCTTTCAGAATCCAACATCCTCTCA
GTTCCTGTGAAGAATCGAGCTGCTCAGAATAGTTTGGATTGGAGAGAAAGGTACTTAGGC
GTCCTTGATTACTCCGCTATTGTTCTTTGGGTGCTGGAGGGTGCGGAAACAGCAGCAGCT
GCCATATCAGCAAGTTCAGCAGCAGCAGCCGGGGTTGGAGCAGGTACTGTTGGTGCTCTT
GGAGCACTGGCATTAGGTGCAACAGGTCCTGCTGCAGTTGCTGGTCTAACGGTTGCTGCA
GTCGGTGCAGCTGTGGCAGGTGGAGTGGCTGCAGATCGAGGAGCAGGAAAGGATGCTCCA
ACTGCAGCTGATACGTTGGGTGAGGATTTCTACAAAGTTATCCTTCAAGAAGAACCCTTT
AAGTCAACAAAGGTGAGCTCCATCATAAAATCCTATCGGTGGGCACCATTTGTTCCAGTA
GCAATGGACAGTTCTATGTTGAGTGTGTTGCTGCTGTTGTCAAAATATAGGCTGCGGAAC
GTACCAGTGATAGAAAGGGGAAGTCCATACCTTAAGAACTTTATAACTCAATCAGCCGTG
GTACGGGGTCTTGTAGGATGCAAAGGGAGGGATTGGTTTGACTGCATCTCCGCTCACCCT
ATATCAGAACTTGGCCTCCCATACATGTCCGCTGACGAGGTTATTAGTGTCCGAGACGAT
GAGCTGATTCTGGAAGCATTCAAGAAAATGAGAGATAATAATATCGGAGGTCTGCCAGTT
GTTGAAGGACCAAAGAAGAAAATAGTTGGCAATGTAAGCATAAGAGACATCAGATTCTTG
TTACTCAAACCTGAACTATTCTCCAATTTCAGGCAGCTGACAGTTGCGGGCTTCATGAAC
ACCGTTGCTTCGGCAACCCATGATGCCACAAAGGCTGCTACACCAATAACATGCAAGCTC
GGTTCAACTCTTTGTACTGTGATAGACACTCTCGCGTCCAAGTTAGTTCACAGGATCTAC
GTGACAGCTGAGGATGGTGATGAAGTAGTTGGTGTGATTACGCTCAGAGATGTCATTTCT
TGCTTCATCTATGAACCACCAAACTTTTTTGATAACTATTTTGGATTTTCTGCACAAGAA
ATGCTTGGGAACTGA