Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002249
CDS Infomation

pacid=37440622 polypeptide=PGSC0003DMP400001641 locus=PGSC0003DMG401000860 ID=PGSC0003DMT400002249.v4.03 annot-version=v4.03
Sequence

ATGGTTCCAATATGGTTGTGTATCTTCACTATCTTTTCTTCTTTCTTGTTCTACAAAACA
AGTTGTGAGCTCATAACTTCTCTTCCTGGACAACCTCCAAATATAATCTTCAAACAATAC
TCTGGTTATATTATTACAAATTCTCAACATGGTAGATCTCTCTTTTATTATTTTGTCGAA
GCGGATTCAGAAAATGCAACATCACTTCCCCTTACTCTCTGGCTCAATGGAGGCCCTGGT
TGTTCATCTGTGGGGTTTGGTGCTTTTATGGAACATGGTCCTTTTCAGCCAGGGAAAGAT
GGGAGACTAATCAAAAACAAGTATTCTTGGAATTTAGAATCGAACATGTTATACGTTGAG
TCCCCGATTGGAGTAGGATTTTCATACTCGAATACAAGCTCAGACTACACCAATTGGGAT
GATGTTGCAACAGCAAAGGAGAATCTCCAATTTATACTCAACTGGTTAGAGAAATTCCCC
GAATATAAGAACTCGGAATTATTCTTAGCGGGTGAAAGTTATGCAGGTCACTATATTCCA
CAGCTTACAATATTGCTGCTTGATTACAACAGAAAGCCTAATGTTAAACCAATCAAGCTT
AAATCAATTGCACTGGGGAATCCACTACTAGATCTTGAAATAAGCGTTAAGTCTTCCGAA
TATCTATGGTCACATGGTGCAATTTCTGATGAACTACTTACTATGAAAAGAACAATCTGT
AACGAAACGAGGTTGTTGTTGGAATCAATACATAATAATATGTCTAATGAGTGCTCAGAA
GTGTGGGAACTCACGAATGAGGAGATGGGAAGTGATACAGATATGGGCGATCTGCTCGCG
CCAATATGTGTATCTTCTGGTGCAGCAGGACAACTAGGAGTCCTTGGAACACTTGCCACA
ATACACAAAAAGGATGTGAGAAAAATTGGCGATCCATGCCTTACTGATAGGATAAATATG
TACCTTAACAAGCCAGAAGTTCAAAAGGCACTACATGCCAACACCACTCACCTGCCATAT
GCCTGGGATTTTTGTTTGGGGCACCTTCAGTATCAAAGAGGTGATTTAGCCATAAATGTT
ATACCTCTATTGTCAAATATACTAAAAGAGAATATCCAAGTTCTGCTTTACAGTGGAGAC
CAAGATACAAAAATCCCACTGACCCAAACTAGGAAAATTGCTAAACTACTTGCAAGAGAT
TTAAAGCTAGTTGCTTTAGACAAATATGGTCCTTGGTATGATGACATGCAGATTGGAGGA
TGGAGTCAATCATATGGAGGGGTAATAGAAGGCAAAAATGTAACATATTTAACATTTGCT
ACAGTTAGAGGTGCAGCTCATGAAGTTCCTTATACTTCTCCTTCACAAGCTCTTACTCTT
TTTAGAGCATTTCTGAAAGGACAACCTCCATCGCGAAGGAACAACACCATTCGAGCCAAC
AAGTTGCATAACCCTATCGATATGATGAACCTCTTTTCGATTGCAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001641
PEP Infomation

pacid=37440622 transcript=PGSC0003DMT400002249 locus=PGSC0003DMG401000860 ID=PGSC0003DMT400002249.v4.03 annot-version=v4.03
Sequence

MVPIWLCIFTIFSSFLFYKTSCELITSLPGQPPNIIFKQYSGYIITNSQHGRSLFYYFVE
ADSENATSLPLTLWLNGGPGCSSVGFGAFMEHGPFQPGKDGRLIKNKYSWNLESNMLYVE
SPIGVGFSYSNTSSDYTNWDDVATAKENLQFILNWLEKFPEYKNSELFLAGESYAGHYIP
QLTILLLDYNRKPNVKPIKLKSIALGNPLLDLEISVKSSEYLWSHGAISDELLTMKRTIC
NETRLLLESIHNNMSNECSEVWELTNEEMGSDTDMGDLLAPICVSSGAAGQLGVLGTLAT
IHKKDVRKIGDPCLTDRINMYLNKPEVQKALHANTTHLPYAWDFCLGHLQYQRGDLAINV
IPLLSNILKENIQVLLYSGDQDTKIPLTQTRKIAKLLARDLKLVALDKYGPWYDDMQIGG
WSQSYGGVIEGKNVTYLTFATVRGAAHEVPYTSPSQALTLFRAFLKGQPPSRRNNTIRAN
KLHNPIDMMNLFSIAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400002249
Transcript Infomation

pacid=37440622 locus=PGSC0003DMG401000860 ID=PGSC0003DMT400002249.v4.03 annot-version=v4.03
Sequence

ATGGTTCCAATATGGTTGTGTATCTTCACTATCTTTTCTTCTTTCTTGTTCTACAAAACA
AGTTGTGAGCTCATAACTTCTCTTCCTGGACAACCTCCAAATATAATCTTCAAACAATAC
TCTGGTTATATTATTACAAATTCTCAACATGGTAGATCTCTCTTTTATTATTTTGTCGAA
GCGGATTCAGAAAATGCAACATCACTTCCCCTTACTCTCTGGCTCAATGGAGGCCCTGGT
TGTTCATCTGTGGGGTTTGGTGCTTTTATGGAACATGGTCCTTTTCAGCCAGGGAAAGAT
GGGAGACTAATCAAAAACAAGTATTCTTGGAATTTAGAATCGAACATGTTATACGTTGAG
TCCCCGATTGGAGTAGGATTTTCATACTCGAATACAAGCTCAGACTACACCAATTGGGAT
GATGTTGCAACAGCAAAGGAGAATCTCCAATTTATACTCAACTGGTTAGAGAAATTCCCC
GAATATAAGAACTCGGAATTATTCTTAGCGGGTGAAAGTTATGCAGGTCACTATATTCCA
CAGCTTACAATATTGCTGCTTGATTACAACAGAAAGCCTAATGTTAAACCAATCAAGCTT
AAATCAATTGCACTGGGGAATCCACTACTAGATCTTGAAATAAGCGTTAAGTCTTCCGAA
TATCTATGGTCACATGGTGCAATTTCTGATGAACTACTTACTATGAAAAGAACAATCTGT
AACGAAACGAGGTTGTTGTTGGAATCAATACATAATAATATGTCTAATGAGTGCTCAGAA
GTGTGGGAACTCACGAATGAGGAGATGGGAAGTGATACAGATATGGGCGATCTGCTCGCG
CCAATATGTGTATCTTCTGGTGCAGCAGGACAACTAGGAGTCCTTGGAACACTTGCCACA
ATACACAAAAAGGATGTGAGAAAAATTGGCGATCCATGCCTTACTGATAGGATAAATATG
TACCTTAACAAGCCAGAAGTTCAAAAGGCACTACATGCCAACACCACTCACCTGCCATAT
GCCTGGGATTTTTGTTTGGGGCACCTTCAGTATCAAAGAGGTGATTTAGCCATAAATGTT
ATACCTCTATTGTCAAATATACTAAAAGAGAATATCCAAGTTCTGCTTTACAGTGGAGAC
CAAGATACAAAAATCCCACTGACCCAAACTAGGAAAATTGCTAAACTACTTGCAAGAGAT
TTAAAGCTAGTTGCTTTAGACAAATATGGTCCTTGGTATGATGACATGCAGATTGGAGGA
TGGAGTCAATCATATGGAGGGGTAATAGAAGGCAAAAATGTAACATATTTAACATTTGCT
ACAGTTAGAGGTGCAGCTCATGAAGTTCCTTATACTTCTCCTTCACAAGCTCTTACTCTT
TTTAGAGCATTTCTGAAAGGACAACCTCCATCGCGAAGGAACAACACCATTCGAGCCAAC
AAGTTGCATAACCCTATCGATATGATGAACCTCTTTTCGATTGCAATTTAA