Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002190
CDS Infomation

pacid=37436695 polypeptide=PGSC0003DMP400001595 locus=PGSC0003DMG400000839 ID=PGSC0003DMT400002190.v4.03 annot-version=v4.03
Sequence

ATGCCTCAAAGAAGCTCGAAAGATCAAGAAAATCCAACACCTACTCTCAGAAGATCTCCG
CGGCTTAATGCCGCTGCTGCTGCTACCGAAGTCCTCAAGAAACAGATTGAAGTTTCAAAA
AGCCCCACAAAATCGACTACCAGGTTGCGAAGATCTTCAAGATTGAGTATTGGAACTCCG
CAGAACAATGGTGAGGTTAAGAATTCAGAGAGAAGGGTAACTCGTGGTTCTGCTCGAGTT
TGTGTTACCATTGACGATTCAGTTGAGAAAAGAAATGGGGTTGTTACTAGAAGTGGAAAA
GCTCATGTTTCTAGATGTACATTAGGTGGTAGAATAGAGAGACCTGTCCCGTCATCTGAA
GTAGCGGCATGTGGGGAGGATGACGACAATGGCGGTATGGGAAAGAAACAGGCAGGCTTG
AAGAGGAAGAGAACCCAAGGAATGGAGGAGACTAATGTTGTTGTTAATGGGTGGACCAAT
GAACAAGAGCTGGCGTTACAAAGTGCTTATTTTGCGGCGAAGGCAACACCTAACTTCTGG
AAGAAAGTTGCTAAGATGGTGCCTGGGAAATCAGCAAAGGATTGTTTCGACAAGATACAT
TCGGATTTTATAACCCCACCTCAGCCTCAACCACGTTCAAGGGTTAAAAAGATGAATACA
TTATCGCTTTCTCCGTGTGCAACTAAATTGCTTCAGTCCACTGAGAAAAACACAAACAAG
CGGAGACATAGCAAGCCGAAGAACCATCTCTCACGCAAGGCTGTGAGACAACTACTGGAA
AAGCAAACTGATGCAGATCGAGATAAGGGAGCAGACTTCTTCAATGCTCTTGAACCATCA
ACAAATCCAACTGATGGGGCATTTTGCCAGGACACAATTTTTGTCACCCCAGAGCGCAAC
AAAGAAAGTTTGCTTAGAAAGTGCCTGGAGAGATCGTCTTTAACCCAGAAAAAACACCGT
TCCCGATTAAGTGATTCATCTGGAGCAACTCTTACCAGCCCACCAGTTCTAAAGCCAATT
AAGAATAAGGCCCTACATGAGAGGTATGTTGATCAGCTACATTGCAGGGAAGCAAAGAGA
AAGGCAGCCACTTCAAAGACAGCAAAGGGCAACCAAAAAAAGAATGAGAATGTCATAAAG
CCAGATGTGATTAAAGCTGCGAAAAATGCTTTAATATCTGAAGCAAGAGATGCAATCAAC
CAATTTCAAAATTTACAGACACGCGCCATGAACAGTTTCAATGATGATGACGATGATGAT
TATTATGATGAGAACCATAATTCAGACGATGACGAGGATGCCAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001595
PEP Infomation

pacid=37436695 transcript=PGSC0003DMT400002190 locus=PGSC0003DMG400000839 ID=PGSC0003DMT400002190.v4.03 annot-version=v4.03
Sequence

MPQRSSKDQENPTPTLRRSPRLNAAAAATEVLKKQIEVSKSPTKSTTRLRRSSRLSIGTP
QNNGEVKNSERRVTRGSARVCVTIDDSVEKRNGVVTRSGKAHVSRCTLGGRIERPVPSSE
VAACGEDDDNGGMGKKQAGLKRKRTQGMEETNVVVNGWTNEQELALQSAYFAAKATPNFW
KKVAKMVPGKSAKDCFDKIHSDFITPPQPQPRSRVKKMNTLSLSPCATKLLQSTEKNTNK
RRHSKPKNHLSRKAVRQLLEKQTDADRDKGADFFNALEPSTNPTDGAFCQDTIFVTPERN
KESLLRKCLERSSLTQKKHRSRLSDSSGATLTSPPVLKPIKNKALHERYVDQLHCREAKR
KAATSKTAKGNQKKNENVIKPDVIKAAKNALISEARDAINQFQNLQTRAMNSFNDDDDDD
YYDENHNSDDDEDAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400002190
Transcript Infomation

pacid=37436695 locus=PGSC0003DMG400000839 ID=PGSC0003DMT400002190.v4.03 annot-version=v4.03
Sequence

ATGCCTCAAAGAAGCTCGAAAGATCAAGAAAATCCAACACCTACTCTCAGAAGATCTCCG
CGGCTTAATGCCGCTGCTGCTGCTACCGAAGTCCTCAAGAAACAGATTGAAGTTTCAAAA
AGCCCCACAAAATCGACTACCAGGTTGCGAAGATCTTCAAGATTGAGTATTGGAACTCCG
CAGAACAATGGTGAGGTTAAGAATTCAGAGAGAAGGGTAACTCGTGGTTCTGCTCGAGTT
TGTGTTACCATTGACGATTCAGTTGAGAAAAGAAATGGGGTTGTTACTAGAAGTGGAAAA
GCTCATGTTTCTAGATGTACATTAGGTGGTAGAATAGAGAGACCTGTCCCGTCATCTGAA
GTAGCGGCATGTGGGGAGGATGACGACAATGGCGGTATGGGAAAGAAACAGGCAGGCTTG
AAGAGGAAGAGAACCCAAGGAATGGAGGAGACTAATGTTGTTGTTAATGGGTGGACCAAT
GAACAAGAGCTGGCGTTACAAAGTGCTTATTTTGCGGCGAAGGCAACACCTAACTTCTGG
AAGAAAGTTGCTAAGATGGTGCCTGGGAAATCAGCAAAGGATTGTTTCGACAAGATACAT
TCGGATTTTATAACCCCACCTCAGCCTCAACCACGTTCAAGGGTTAAAAAGATGAATACA
TTATCGCTTTCTCCGTGTGCAACTAAATTGCTTCAGTCCACTGAGAAAAACACAAACAAG
CGGAGACATAGCAAGCCGAAGAACCATCTCTCACGCAAGGCTGTGAGACAACTACTGGAA
AAGCAAACTGATGCAGATCGAGATAAGGGAGCAGACTTCTTCAATGCTCTTGAACCATCA
ACAAATCCAACTGATGGGGCATTTTGCCAGGACACAATTTTTGTCACCCCAGAGCGCAAC
AAAGAAAGTTTGCTTAGAAAGTGCCTGGAGAGATCGTCTTTAACCCAGAAAAAACACCGT
TCCCGATTAAGTGATTCATCTGGAGCAACTCTTACCAGCCCACCAGTTCTAAAGCCAATT
AAGAATAAGGCCCTACATGAGAGGTATGTTGATCAGCTACATTGCAGGGAAGCAAAGAGA
AAGGCAGCCACTTCAAAGACAGCAAAGGGCAACCAAAAAAAGAATGAGAATGTCATAAAG
CCAGATGTGATTAAAGCTGCGAAAAATGCTTTAATATCTGAAGCAAGAGATGCAATCAAC
CAATTTCAAAATTTACAGACACGCGCCATGAACAGTTTCAATGATGATGACGATGATGAT
TATTATGATGAGAACCATAATTCAGACGATGACGAGGATGCCAGATAA