Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002160
CDS Infomation

pacid=37443412 polypeptide=PGSC0003DMP400001573 locus=PGSC0003DMG400000826 ID=PGSC0003DMT400002160.v4.03 annot-version=v4.03
Sequence

ATGTCCGGCAAATCCCGCAACTTTCGCCGTCGTGGCGGCGACGACGGCGACGATGATGAA
ACCTCCGCCAAGACCACCAACGGCACCGCCGCTAAACCTACAACCACCGCTTCCGCCACC
AAACCCAAAAAGAAAAGTCTACTTAGTTTCGCCGACGACGAAGATTCCGACGATACTCCC
TTCGTTCGGCCTTCCTCCAAACCCTCATCCGCTTCTTCACGAATCACGAAACCCTCTTCG
TCATCTTCTGCGCACAAGCTTACTTCTGGAAAAGACCGAATTACCCCTAAACCTCCTTCA
TTCACCTCCAATGTACAACCTCAAGCTGGTACTTACACCAAGGAAGCGCTCCTTGAGCTC
CAGAAGAACACCAGAACCTTAGTTGGTTCTCGCTCTGCCCAACCCAAACCCGAGCCCAGA
CCCGGGCCCGTTGAACCAGTTATAGTCTTGAAAGGGCTTGTGAAACCACCATTTAGTGTG
ACTGCTCAAACTCAGCAAAATGGGCAAGAGAGTGAAGATGACGAAATGGATGTTGATCAA
TTTGGTGGTACTGTTAATAGGTTGGGTTCAATGGCATTGGAGAAGGATTCGAGGAAGAAG
GATGATGTTGGGTCAGTAATACCTGATAAGATGACTATTGATGCAATACGGGCTAAGAGG
GAGAGGCTACGTCAAGCTCGGCCTGCGGCTCAGGACTTTATAGCATTGGATGAAGGGGGT
AATCATGGTGAAGCTGAGGGTTTGAGTGACGAGGAGCCGGAGTTTCAGCAGAGAATTGGG
TTCTATGGGGAGAAGATTGGTAGTGGGAGAAGGGGTGTGTTTGAGGATTTTGAGGATAAG
GCAATGCAGAAAGATGGTGGATTTCGTAGCGATGATGATGAGGAAGATGAGGAGGAAAAA
ATGTGGGAGGAAGAGCAGGTTAGAAAGGGGTTAGGAAAAAGGTTGGATGATGGGTCTAAT
AGAGGGGTGATGAGTAGTGTTGTAAGCAGTGCAGCTGCAGTTCAGAATGTTCAGAAGGCG
AATTTCGGAAGTTCGGCTGTAGGAGCTAGTGTATATTCCTCAGTACAAAGTATTGATGTT
TCTGATGGTCCTACTATTGGAGGAGGAGTGGTTGGAGGCTTGCCCAGTTTGGATGCATTA
TCAATTTCTAAGAAGGCCGAGGTTGCTAAGAAAGCCTTGTATGAGAGTATGGGAAGACTC
AAAGAATCTCATGGCCGAACTGTGACATCATTGCATAAGACTGAAGAAAATTTATCTGCC
TCATTGTCGAAAGTCACTACGCTGGAAAATTCTTTGTCTGCTGCTGGTGAGAAGTACATG
TTTATGCAAAAGCTTCGCGACTTTGTTTCTGTTATATGTGCACTTTTGCAGGATAAAGGC
CCTTACATTGAGGAACTTGAAGACCAGATGCAGAAACTTCATGAAGAACGAGCAGCCGCT
ATCTTAGAAAGGAGAGCTGCTGATAATGATGATGAAATGAAGGAACTTGAAGCTGCTGTA
AGTGCTGCAAGACAAGTTCTAAGTAGAGGTGGGAGCAATGCAGCAACAATAGAAGCTGCC
ACAGCTGCTGCTCAGACTTCAACAGCAGCAATGAGGAAAGGAGGAGACTTACCTATAGAG
CTAGATGAATTTGGTAGAGATAAGAATCTGCAGAAACGGATGGATACAACAAGAAGGGCA
GAGGCTCGGAAACGAAGGAGAGTGAAAAATGATGTTAAAAGAATGTCAGCTATAAAATGT
GATAGCTCTTATCAGAAAATAGAAGGAGAATCTAGCACCGACGAAAGTGACTCTGAGAGT
ACAGCATATCAATCAAACCGTGATCAATTGCTTCAGGTTTCCGAGCAGATTTTTGGTGAT
GCACACGAGGAATACTCTCAACTGTCTGTGGTTGTTGAAAAGTTTGACAGATGGAAGAAA
GATTATGCCTCAAGCTATCGTGATGCGTATATGTCACTTAGTATACCTGTTATTTTTTCA
CCCTATGTGAGACTAGAGCTTCTGAAGTGGGATCCACTGCATGAAAACACAGATTTTATG
GATATGAACTGGCACAATTCTCTATTCAGTTATGGAATTCCCCCAGAAGGTGAAGCCGAA
ATAAGTGTTGATGATACTGATGTCAATCTTATTCCTCAGTTGGTGGAGAAGCTTGCAATA
CCCATTCTTCATAACCAGTTAGCTAATTGCTGGGATATGCTTAGCACCAGTGAAACAGTG
TGTGCTGTCTCTGCCATGCGATTGGTATTGAGATATGGCCCCTTTTCTGGCTCAGCCCTC
AGCAATCTGATTGCTGTACTTCGTGATCGTCTAGCTGATGCTGTGGCTAATTTGAAGGTC
CCAACTTGGGACACCCTTGTTATGAGGGCTGTACCTGATGCAGCACGAGTTGCTGCTTAT
AGGTTTGGCATGTCTATTCGTTTGATCAGGAACATATGCTTGTTCCATGAGATTTTTGCC
ATGCCTGTCCTGGAAGAGCTGGTTCTTGATCAACTCTTAAGTGGAAAGATTCTTCCTCAT
CTTCGAAGCATTCAGTCAAACATTCATGATGCTGTAACAAGAACTGAAAGAGTTGTCACT
TCACTACACGGTGTCTGGGCTGGCCCCAAAGCCACAGGAGACTTCAGTCCAAAGCTACGA
CCATTGGTGGATTACTTGCTCTCACTTGCCAGGGTGCTCGAAAAGAAGCACTCATCAAGC
AGTGGAGAGATAGATACATCTAAATTTGCTCGTCGATTGAAGAAGATGCTTGTAGAACTG
AATCAATATGACTATGCCAGGGATATATCAAGAACCTTCAACATCAAGGAGGCCTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001573
PEP Infomation

pacid=37443412 transcript=PGSC0003DMT400002160 locus=PGSC0003DMG400000826 ID=PGSC0003DMT400002160.v4.03 annot-version=v4.03
Sequence

MSGKSRNFRRRGGDDGDDDETSAKTTNGTAAKPTTTASATKPKKKSLLSFADDEDSDDTP
FVRPSSKPSSASSRITKPSSSSSAHKLTSGKDRITPKPPSFTSNVQPQAGTYTKEALLEL
QKNTRTLVGSRSAQPKPEPRPGPVEPVIVLKGLVKPPFSVTAQTQQNGQESEDDEMDVDQ
FGGTVNRLGSMALEKDSRKKDDVGSVIPDKMTIDAIRAKRERLRQARPAAQDFIALDEGG
NHGEAEGLSDEEPEFQQRIGFYGEKIGSGRRGVFEDFEDKAMQKDGGFRSDDDEEDEEEK
MWEEEQVRKGLGKRLDDGSNRGVMSSVVSSAAAVQNVQKANFGSSAVGASVYSSVQSIDV
SDGPTIGGGVVGGLPSLDALSISKKAEVAKKALYESMGRLKESHGRTVTSLHKTEENLSA
SLSKVTTLENSLSAAGEKYMFMQKLRDFVSVICALLQDKGPYIEELEDQMQKLHEERAAA
ILERRAADNDDEMKELEAAVSAARQVLSRGGSNAATIEAATAAAQTSTAAMRKGGDLPIE
LDEFGRDKNLQKRMDTTRRAEARKRRRVKNDVKRMSAIKCDSSYQKIEGESSTDESDSES
TAYQSNRDQLLQVSEQIFGDAHEEYSQLSVVVEKFDRWKKDYASSYRDAYMSLSIPVIFS
PYVRLELLKWDPLHENTDFMDMNWHNSLFSYGIPPEGEAEISVDDTDVNLIPQLVEKLAI
PILHNQLANCWDMLSTSETVCAVSAMRLVLRYGPFSGSALSNLIAVLRDRLADAVANLKV
PTWDTLVMRAVPDAARVAAYRFGMSIRLIRNICLFHEIFAMPVLEELVLDQLLSGKILPH
LRSIQSNIHDAVTRTERVVTSLHGVWAGPKATGDFSPKLRPLVDYLLSLARVLEKKHSSS
SGEIDTSKFARRLKKMLVELNQYDYARDISRTFNIKEAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400002160
Transcript Infomation

pacid=37443412 locus=PGSC0003DMG400000826 ID=PGSC0003DMT400002160.v4.03 annot-version=v4.03
Sequence

ATGTCCGGCAAATCCCGCAACTTTCGCCGTCGTGGCGGCGACGACGGCGACGATGATGAA
ACCTCCGCCAAGACCACCAACGGCACCGCCGCTAAACCTACAACCACCGCTTCCGCCACC
AAACCCAAAAAGAAAAGTCTACTTAGTTTCGCCGACGACGAAGATTCCGACGATACTCCC
TTCGTTCGGCCTTCCTCCAAACCCTCATCCGCTTCTTCACGAATCACGAAACCCTCTTCG
TCATCTTCTGCGCACAAGCTTACTTCTGGAAAAGACCGAATTACCCCTAAACCTCCTTCA
TTCACCTCCAATGTACAACCTCAAGCTGGTACTTACACCAAGGAAGCGCTCCTTGAGCTC
CAGAAGAACACCAGAACCTTAGTTGGTTCTCGCTCTGCCCAACCCAAACCCGAGCCCAGA
CCCGGGCCCGTTGAACCAGTTATAGTCTTGAAAGGGCTTGTGAAACCACCATTTAGTGTG
ACTGCTCAAACTCAGCAAAATGGGCAAGAGAGTGAAGATGACGAAATGGATGTTGATCAA
TTTGGTGGTACTGTTAATAGGTTGGGTTCAATGGCATTGGAGAAGGATTCGAGGAAGAAG
GATGATGTTGGGTCAGTAATACCTGATAAGATGACTATTGATGCAATACGGGCTAAGAGG
GAGAGGCTACGTCAAGCTCGGCCTGCGGCTCAGGACTTTATAGCATTGGATGAAGGGGGT
AATCATGGTGAAGCTGAGGGTTTGAGTGACGAGGAGCCGGAGTTTCAGCAGAGAATTGGG
TTCTATGGGGAGAAGATTGGTAGTGGGAGAAGGGGTGTGTTTGAGGATTTTGAGGATAAG
GCAATGCAGAAAGATGGTGGATTTCGTAGCGATGATGATGAGGAAGATGAGGAGGAAAAA
ATGTGGGAGGAAGAGCAGGTTAGAAAGGGGTTAGGAAAAAGGTTGGATGATGGGTCTAAT
AGAGGGGTGATGAGTAGTGTTGTAAGCAGTGCAGCTGCAGTTCAGAATGTTCAGAAGGCG
AATTTCGGAAGTTCGGCTGTAGGAGCTAGTGTATATTCCTCAGTACAAAGTATTGATGTT
TCTGATGGTCCTACTATTGGAGGAGGAGTGGTTGGAGGCTTGCCCAGTTTGGATGCATTA
TCAATTTCTAAGAAGGCCGAGGTTGCTAAGAAAGCCTTGTATGAGAGTATGGGAAGACTC
AAAGAATCTCATGGCCGAACTGTGACATCATTGCATAAGACTGAAGAAAATTTATCTGCC
TCATTGTCGAAAGTCACTACGCTGGAAAATTCTTTGTCTGCTGCTGGTGAGAAGTACATG
TTTATGCAAAAGCTTCGCGACTTTGTTTCTGTTATATGTGCACTTTTGCAGGATAAAGGC
CCTTACATTGAGGAACTTGAAGACCAGATGCAGAAACTTCATGAAGAACGAGCAGCCGCT
ATCTTAGAAAGGAGAGCTGCTGATAATGATGATGAAATGAAGGAACTTGAAGCTGCTGTA
AGTGCTGCAAGACAAGTTCTAAGTAGAGGTGGGAGCAATGCAGCAACAATAGAAGCTGCC
ACAGCTGCTGCTCAGACTTCAACAGCAGCAATGAGGAAAGGAGGAGACTTACCTATAGAG
CTAGATGAATTTGGTAGAGATAAGAATCTGCAGAAACGGATGGATACAACAAGAAGGGCA
GAGGCTCGGAAACGAAGGAGAGTGAAAAATGATGTTAAAAGAATGTCAGCTATAAAATGT
GATAGCTCTTATCAGAAAATAGAAGGAGAATCTAGCACCGACGAAAGTGACTCTGAGAGT
ACAGCATATCAATCAAACCGTGATCAATTGCTTCAGGTTTCCGAGCAGATTTTTGGTGAT
GCACACGAGGAATACTCTCAACTGTCTGTGGTTGTTGAAAAGTTTGACAGATGGAAGAAA
GATTATGCCTCAAGCTATCGTGATGCGTATATGTCACTTAGTATACCTGTTATTTTTTCA
CCCTATGTGAGACTAGAGCTTCTGAAGTGGGATCCACTGCATGAAAACACAGATTTTATG
GATATGAACTGGCACAATTCTCTATTCAGTTATGGAATTCCCCCAGAAGGTGAAGCCGAA
ATAAGTGTTGATGATACTGATGTCAATCTTATTCCTCAGTTGGTGGAGAAGCTTGCAATA
CCCATTCTTCATAACCAGTTAGCTAATTGCTGGGATATGCTTAGCACCAGTGAAACAGTG
TGTGCTGTCTCTGCCATGCGATTGGTATTGAGATATGGCCCCTTTTCTGGCTCAGCCCTC
AGCAATCTGATTGCTGTACTTCGTGATCGTCTAGCTGATGCTGTGGCTAATTTGAAGGTC
CCAACTTGGGACACCCTTGTTATGAGGGCTGTACCTGATGCAGCACGAGTTGCTGCTTAT
AGGTTTGGCATGTCTATTCGTTTGATCAGGAACATATGCTTGTTCCATGAGATTTTTGCC
ATGCCTGTCCTGGAAGAGCTGGTTCTTGATCAACTCTTAAGTGGAAAGATTCTTCCTCAT
CTTCGAAGCATTCAGTCAAACATTCATGATGCTGTAACAAGAACTGAAAGAGTTGTCACT
TCACTACACGGTGTCTGGGCTGGCCCCAAAGCCACAGGAGACTTCAGTCCAAAGCTACGA
CCATTGGTGGATTACTTGCTCTCACTTGCCAGGGTGCTCGAAAAGAAGCACTCATCAAGC
AGTGGAGAGATAGATACATCTAAATTTGCTCGTCGATTGAAGAAGATGCTTGTAGAACTG
AATCAATATGACTATGCCAGGGATATATCAAGAACCTTCAACATCAAGGAGGCCTTGTGA