Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002134
CDS Infomation

pacid=37444762 polypeptide=PGSC0003DMP400001556 locus=PGSC0003DMG400000816 ID=PGSC0003DMT400002134.v4.03 annot-version=v4.03
Sequence

ATGGAGAATACTGAAGAGTCTTGCATCGAACCTTATTATCCACCAATTGACGAAGAACTA
GTGGGGTTTGATGATGATGCAGAAAATATAACCAAGTATTTGATAAGAGGAAGAATGGAC
CTGGACATTGTCTCGATTGTTGGAATGGCTGGTTTAGGGAAAACAGCTCTGGCTAGAAAG
ATATACAATAGTCGTTCTATTATTGATCATTTTGATGTTCGAGCTTGGTGTTCTGTTTCA
CAAACATATAATATGAGAGAGTTGTTGCTTCAGATTCTAAAACAAATTACAGGTGATCAT
CATTCTAACTATGTTGACTTGGATTATCCTGAATTCATATTGCGGAGGATTCTAAAGGCA
ACAAAATATCTCATTGTATTAGATAACATATGGGAAGTCCATGGATTGGCTTATTTTCGA
GCATGTTTCCCTGATCGTCATACTGGAAGTAGAATAATGGTAACAACTAGAAATGAAGAG
GTGGCTAGCTATGTTAAGGGGTATAGTGATCCTTATTCACTTCCATTTCTAAAAGATGAA
AAGAGTTGGGAACTATTGCAGAAGAAAGTATTTCAACGAGGGAACTCGTGTCCTTTGGAG
CTAGTTAATGTAGGACAACTAGTTGCCAAAAAATGTAAAGGATTACCTTCTTTGATTATC
ATGATTGCTGAAATTCTTTCAGAAGAAAGAGAAGCGTCTTCGTGGCTTAAGGTTGCATAT
GATATAAGTTCTCATGTTTCCGACAAGGAGATGATCATGAAGACGATACAATCAAGTTAT
GATTATTTACCAGACCATTTAAAGCCTTGCCTTCTCTACATGGGATTGTTTCCTAAAGAT
TACGAAATTCCAGTATCTAATCTACTCAAGTGGTGGATAGCTGAGGAGTTTGTGCAGAGC
ATTGACACGTTGAAGCTAGAAGAATTATCAGAGATTTGCTTGTGTAATCTTGTTGGAAGT
AACCTCGTAGTGGTTTCTAAAACAAGGTCGAATGGTAAAATGAAATGCTGCATAGTTCTT
GATCAAGTCCGTGACTTTTGCTTGAGAAAAATTACAGAAGAAAAGTTCATGCAGCTCATA
GGTTATCCAGATCAACCCGAAGAACAAAGGTTATGTATGTACATAGAAGACCGTACTATG
ACAAGTGATTTCAAGGAAAGTGATCAGGAGTTCATTGTTCATCCGAAATTCAGTATATTG
GACCGTAAGAATCCTTTCCGTTTGCTTAATAACTTAAAACTTGTTCGGGTTCTACATTTA
TTGGATATCTACTTGGACAATTCTTTTCCTACTGCATTTCAGTCATTGCCTCACTTGAGG
TACCTTGCAATTTTTGTTAAAGCATTTGATTGCAAATGGGTGTCACACCTACTTCATCTA
CAAACTTTGCGGGTTCGTTCATCTTATATAATGATATCCCCTGCTATATGGAAAATTTCA
AAGTTGAGGCATGTGGACATAAACGAATTTCCTGTTACAATATGGGAAGAAGATGATATT
GTGTTAGATAACTTGAAGACTCTTGGAATGTGTTCTATGTCCGTGGCTGACATGACTCGA
AAGTTTTGGGACAAGTTTGCAAATCTTGAAGAACTCAGGCTCCACATTAATGAATTTGCA
GATCATATTTCTGATTATTCAAGCTCTGCATTGATGAATTTGGATATTATTTTCCCCTCG
CGTCTCAAGTGTTTGTCCCTCAGTGAAATTTTCCTAACGGATGAATTAGTTTCAAGTATT
GCAGAATTGCGATACCTTGAGACTCTTAAATTGTCCGAGATATACTTTGCAGGGGAAAAG
CATTGGGATCTCAGTTACACGTTTGGTCAACTCGAGTTTTTGAAATTACATCGTGTTTTT
ATGACCAAGTGGAGTTGCTCAGAGGATTCATTTCCTCGCCTTGAATGTCTAGTTGTAAAA
AATTGTTCCAAGCTTGAAGAGATCCCGGATACCTTTATGGACAGTGGATTTTTGCGATTG
ATAAAAGTTATTGATTGTAGTGATTCTGTTTGCAATTCAGCTGTGAAGATTAAAGAAGAA
TTAGGAGAATGTTATGGGATCTCGATCCAAGTTGATATCTCGAAAAAAGACAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400001556
PEP Infomation

pacid=37444762 transcript=PGSC0003DMT400002134 locus=PGSC0003DMG400000816 ID=PGSC0003DMT400002134.v4.03 annot-version=v4.03
Sequence

MENTEESCIEPYYPPIDEELVGFDDDAENITKYLIRGRMDLDIVSIVGMAGLGKTALARK
IYNSRSIIDHFDVRAWCSVSQTYNMRELLLQILKQITGDHHSNYVDLDYPEFILRRILKA
TKYLIVLDNIWEVHGLAYFRACFPDRHTGSRIMVTTRNEEVASYVKGYSDPYSLPFLKDE
KSWELLQKKVFQRGNSCPLELVNVGQLVAKKCKGLPSLIIMIAEILSEEREASSWLKVAY
DISSHVSDKEMIMKTIQSSYDYLPDHLKPCLLYMGLFPKDYEIPVSNLLKWWIAEEFVQS
IDTLKLEELSEICLCNLVGSNLVVVSKTRSNGKMKCCIVLDQVRDFCLRKITEEKFMQLI
GYPDQPEEQRLCMYIEDRTMTSDFKESDQEFIVHPKFSILDRKNPFRLLNNLKLVRVLHL
LDIYLDNSFPTAFQSLPHLRYLAIFVKAFDCKWVSHLLHLQTLRVRSSYIMISPAIWKIS
KLRHVDINEFPVTIWEEDDIVLDNLKTLGMCSMSVADMTRKFWDKFANLEELRLHINEFA
DHISDYSSSALMNLDIIFPSRLKCLSLSEIFLTDELVSSIAELRYLETLKLSEIYFAGEK
HWDLSYTFGQLEFLKLHRVFMTKWSCSEDSFPRLECLVVKNCSKLEEIPDTFMDSGFLRL
IKVIDCSDSVCNSAVKIKEELGECYGISIQVDISKKDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400002134
Transcript Infomation

pacid=37444762 locus=PGSC0003DMG400000816 ID=PGSC0003DMT400002134.v4.03 annot-version=v4.03
Sequence

ATGGAGAATACTGAAGAGTCTTGCATCGAACCTTATTATCCACCAATTGACGAAGAACTA
GTGGGGTTTGATGATGATGCAGAAAATATAACCAAGTATTTGATAAGAGGAAGAATGGAC
CTGGACATTGTCTCGATTGTTGGAATGGCTGGTTTAGGGAAAACAGCTCTGGCTAGAAAG
ATATACAATAGTCGTTCTATTATTGATCATTTTGATGTTCGAGCTTGGTGTTCTGTTTCA
CAAACATATAATATGAGAGAGTTGTTGCTTCAGATTCTAAAACAAATTACAGGTGATCAT
CATTCTAACTATGTTGACTTGGATTATCCTGAATTCATATTGCGGAGGATTCTAAAGGCA
ACAAAATATCTCATTGTATTAGATAACATATGGGAAGTCCATGGATTGGCTTATTTTCGA
GCATGTTTCCCTGATCGTCATACTGGAAGTAGAATAATGGTAACAACTAGAAATGAAGAG
GTGGCTAGCTATGTTAAGGGGTATAGTGATCCTTATTCACTTCCATTTCTAAAAGATGAA
AAGAGTTGGGAACTATTGCAGAAGAAAGTATTTCAACGAGGGAACTCGTGTCCTTTGGAG
CTAGTTAATGTAGGACAACTAGTTGCCAAAAAATGTAAAGGATTACCTTCTTTGATTATC
ATGATTGCTGAAATTCTTTCAGAAGAAAGAGAAGCGTCTTCGTGGCTTAAGGTTGCATAT
GATATAAGTTCTCATGTTTCCGACAAGGAGATGATCATGAAGACGATACAATCAAGTTAT
GATTATTTACCAGACCATTTAAAGCCTTGCCTTCTCTACATGGGATTGTTTCCTAAAGAT
TACGAAATTCCAGTATCTAATCTACTCAAGTGGTGGATAGCTGAGGAGTTTGTGCAGAGC
ATTGACACGTTGAAGCTAGAAGAATTATCAGAGATTTGCTTGTGTAATCTTGTTGGAAGT
AACCTCGTAGTGGTTTCTAAAACAAGGTCGAATGGTAAAATGAAATGCTGCATAGTTCTT
GATCAAGTCCGTGACTTTTGCTTGAGAAAAATTACAGAAGAAAAGTTCATGCAGCTCATA
GGTTATCCAGATCAACCCGAAGAACAAAGGTTATGTATGTACATAGAAGACCGTACTATG
ACAAGTGATTTCAAGGAAAGTGATCAGGAGTTCATTGTTCATCCGAAATTCAGTATATTG
GACCGTAAGAATCCTTTCCGTTTGCTTAATAACTTAAAACTTGTTCGGGTTCTACATTTA
TTGGATATCTACTTGGACAATTCTTTTCCTACTGCATTTCAGTCATTGCCTCACTTGAGG
TACCTTGCAATTTTTGTTAAAGCATTTGATTGCAAATGGGTGTCACACCTACTTCATCTA
CAAACTTTGCGGGTTCGTTCATCTTATATAATGATATCCCCTGCTATATGGAAAATTTCA
AAGTTGAGGCATGTGGACATAAACGAATTTCCTGTTACAATATGGGAAGAAGATGATATT
GTGTTAGATAACTTGAAGACTCTTGGAATGTGTTCTATGTCCGTGGCTGACATGACTCGA
AAGTTTTGGGACAAGTTTGCAAATCTTGAAGAACTCAGGCTCCACATTAATGAATTTGCA
GATCATATTTCTGATTATTCAAGCTCTGCATTGATGAATTTGGATATTATTTTCCCCTCG
CGTCTCAAGTGTTTGTCCCTCAGTGAAATTTTCCTAACGGATGAATTAGTTTCAAGTATT
GCAGAATTGCGATACCTTGAGACTCTTAAATTGTCCGAGATATACTTTGCAGGGGAAAAG
CATTGGGATCTCAGTTACACGTTTGGTCAACTCGAGTTTTTGAAATTACATCGTGTTTTT
ATGACCAAGTGGAGTTGCTCAGAGGATTCATTTCCTCGCCTTGAATGTCTAGTTGTAAAA
AATTGTTCCAAGCTTGAAGAGATCCCGGATACCTTTATGGACAGTGGATTTTTGCGATTG
ATAAAAGTTATTGATTGTAGTGATTCTGTTTGCAATTCAGCTGTGAAGATTAAAGAAGAA
TTAGGAGAATGTTATGGGATCTCGATCCAAGTTGATATCTCGAAAAAAGACAAATGA