Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002108
CDS Infomation

pacid=37445388 polypeptide=PGSC0003DMP400001534 locus=PGSC0003DMG400000804 ID=PGSC0003DMT400002108.v4.03 annot-version=v4.03
Sequence

ATGTGTTCTTCTGTAATCCCATCTTCTCTTACCTTTTCACCTAAATCCCGTTTCATTTAC
AGTCAAGATTTGGTTTTTACCTCATACCCATTTCTCCTAAGGACTAGAATTCCTAAGTTT
CCCCTTTCTGCTTCAGTTTCAGAAAAAGTTGCAGAAGTTTCTTGGGGTATTTCTGATCCA
AATGTTTTTGATGAGTATAATGGTTGGGACTTTGTTGAACCTCCAGTTGAAAAGAAGAAG
AAAAAGGGTTTGTCGAAATTTTTGGTTATTGGTATGTCAGTGTCTCTTGCTGCTGGACTT
GGTGTTGCTTCCTACTTTTCACTATACCAGAAAGGATTCAAAATTCAATTTACTGGGCCA
TTCCATGAGTCACATGACAGTTTAGTATCTAATGAGGCTGCTAATAAGGGAAAAGATGGC
GAAACGGTTGATTTGCCAATGGAAAGTGCTCAGATTTCTGAAACGGTGGAGGGAGTTTCT
GATTTCGATGACAAAAATGTTGTCTTGGAGACAAGTCATGTTTCAACTAAAGGAGTAACT
AGAGGAGTACTTGGACGTATTACAATTCCCTTCGCTGTAGATTCTACTCAAGAAGAAGCT
CTTTTTATGTTGAAGAAACTCAAGATCATTGAAGATGATGTTAAAGCAGATGAACTATGT
TCAAGGAGGGAATATGCAAGATGGTTAGTTAAAGAAAATACACAACTGGAAAGGAGTAGA
AAGCATCGGATAGCTCCATCAGTTGTGCTTTCTGGTTCTACAATTGCTGCCTTTGATGAT
GTGAGTGTTGAAGACCCTGATTTTGCGACCATTCAATCCCTAGCTGAGGCTGGTATTATT
CCTAGCAAGCTGTCAGATAAGGAGTTTGCTTCCACTCCGAATGTTTCAGAAGATCAGGGC
GCCTGTTTTTTCCCTGATAGATTTTTGTCTCGCCAAGATCTAATTAGTTGGAAAGCCAAA
ATAGAGTATGAAATCATGCCAGGGATAGACAAAGAGATATCAAGGAAGAACATAGGCTTT
CTGGATGTAAGGGACATCAATTCTGAAGCTTTGGTGGAACTTTTTGTGGATTTACGGGCT
GGTGAACAGAGCATTCTTCGGAGAGTTTTTGGACAGGCGAAACGATTCCAGCCTGATAAA
CCATCCACGAAGGCTCAGGCAGCTGTTTCGCTGACAAGTGGGAGAATGGAAGAGTATATA
CAAAGTGAACTCGCAAAACTTGAAGCAGAAAATTTATCGAGACTAATGGCAATGGAAGAA
ATAAAGTCTGACCTACTTGATAGAGGAGAAATACAAAGGATTTGGGAGAGTAAAATGGAA
GTAGAAAAAAGTCGTGGTTTAGAGGTAGATAGTGCTTATTTGGATTCTATTAGAGATTTA
AAACAGGAAAGAATTGTACAAGAGAATGCTCGAGCTGAGCTTCTGAGGCAGAAGGCAGCT
CTAGACTGTCAGAAACAGCTACTTTCTAGTCTCAAGGAAGAGGTCGATGAGATGTCCGAA
AAGCTTGCACGTGAGAAGTTTAAGCATGTGGATGAGCAGTGTGATTTAAGTGGTACGATT
CATGATTTGCAGGTTAAGCATGAAGTTTTGCTTGACAAAAAATCTATGTTGGAAGCTGAG
ATTGAAGCTTTGCGAAAACTGAGATCATGGGTCGAGGATGAAGCGAGAAGAAGTCAAGCT
CGCGCTAAAGTTCTCGAGGAGGTTGAGCGAAGGTGGAAATGGGAGGAGCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400001534
PEP Infomation

pacid=37445388 transcript=PGSC0003DMT400002108 locus=PGSC0003DMG400000804 ID=PGSC0003DMT400002108.v4.03 annot-version=v4.03
Sequence

MCSSVIPSSLTFSPKSRFIYSQDLVFTSYPFLLRTRIPKFPLSASVSEKVAEVSWGISDP
NVFDEYNGWDFVEPPVEKKKKKGLSKFLVIGMSVSLAAGLGVASYFSLYQKGFKIQFTGP
FHESHDSLVSNEAANKGKDGETVDLPMESAQISETVEGVSDFDDKNVVLETSHVSTKGVT
RGVLGRITIPFAVDSTQEEALFMLKKLKIIEDDVKADELCSRREYARWLVKENTQLERSR
KHRIAPSVVLSGSTIAAFDDVSVEDPDFATIQSLAEAGIIPSKLSDKEFASTPNVSEDQG
ACFFPDRFLSRQDLISWKAKIEYEIMPGIDKEISRKNIGFLDVRDINSEALVELFVDLRA
GEQSILRRVFGQAKRFQPDKPSTKAQAAVSLTSGRMEEYIQSELAKLEAENLSRLMAMEE
IKSDLLDRGEIQRIWESKMEVEKSRGLEVDSAYLDSIRDLKQERIVQENARAELLRQKAA
LDCQKQLLSSLKEEVDEMSEKLAREKFKHVDEQCDLSGTIHDLQVKHEVLLDKKSMLEAE
IEALRKLRSWVEDEARRSQARAKVLEEVERRWKWEEQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400002108
Transcript Infomation

pacid=37445388 locus=PGSC0003DMG400000804 ID=PGSC0003DMT400002108.v4.03 annot-version=v4.03
Sequence

ATGTGTTCTTCTGTAATCCCATCTTCTCTTACCTTTTCACCTAAATCCCGTTTCATTTAC
AGTCAAGATTTGGTTTTTACCTCATACCCATTTCTCCTAAGGACTAGAATTCCTAAGTTT
CCCCTTTCTGCTTCAGTTTCAGAAAAAGTTGCAGAAGTTTCTTGGGGTATTTCTGATCCA
AATGTTTTTGATGAGTATAATGGTTGGGACTTTGTTGAACCTCCAGTTGAAAAGAAGAAG
AAAAAGGGTTTGTCGAAATTTTTGGTTATTGGTATGTCAGTGTCTCTTGCTGCTGGACTT
GGTGTTGCTTCCTACTTTTCACTATACCAGAAAGGATTCAAAATTCAATTTACTGGGCCA
TTCCATGAGTCACATGACAGTTTAGTATCTAATGAGGCTGCTAATAAGGGAAAAGATGGC
GAAACGGTTGATTTGCCAATGGAAAGTGCTCAGATTTCTGAAACGGTGGAGGGAGTTTCT
GATTTCGATGACAAAAATGTTGTCTTGGAGACAAGTCATGTTTCAACTAAAGGAGTAACT
AGAGGAGTACTTGGACGTATTACAATTCCCTTCGCTGTAGATTCTACTCAAGAAGAAGCT
CTTTTTATGTTGAAGAAACTCAAGATCATTGAAGATGATGTTAAAGCAGATGAACTATGT
TCAAGGAGGGAATATGCAAGATGGTTAGTTAAAGAAAATACACAACTGGAAAGGAGTAGA
AAGCATCGGATAGCTCCATCAGTTGTGCTTTCTGGTTCTACAATTGCTGCCTTTGATGAT
GTGAGTGTTGAAGACCCTGATTTTGCGACCATTCAATCCCTAGCTGAGGCTGGTATTATT
CCTAGCAAGCTGTCAGATAAGGAGTTTGCTTCCACTCCGAATGTTTCAGAAGATCAGGGC
GCCTGTTTTTTCCCTGATAGATTTTTGTCTCGCCAAGATCTAATTAGTTGGAAAGCCAAA
ATAGAGTATGAAATCATGCCAGGGATAGACAAAGAGATATCAAGGAAGAACATAGGCTTT
CTGGATGTAAGGGACATCAATTCTGAAGCTTTGGTGGAACTTTTTGTGGATTTACGGGCT
GGTGAACAGAGCATTCTTCGGAGAGTTTTTGGACAGGCGAAACGATTCCAGCCTGATAAA
CCATCCACGAAGGCTCAGGCAGCTGTTTCGCTGACAAGTGGGAGAATGGAAGAGTATATA
CAAAGTGAACTCGCAAAACTTGAAGCAGAAAATTTATCGAGACTAATGGCAATGGAAGAA
ATAAAGTCTGACCTACTTGATAGAGGAGAAATACAAAGGATTTGGGAGAGTAAAATGGAA
GTAGAAAAAAGTCGTGGTTTAGAGGTAGATAGTGCTTATTTGGATTCTATTAGAGATTTA
AAACAGGAAAGAATTGTACAAGAGAATGCTCGAGCTGAGCTTCTGAGGCAGAAGGCAGCT
CTAGACTGTCAGAAACAGCTACTTTCTAGTCTCAAGGAAGAGGTCGATGAGATGTCCGAA
AAGCTTGCACGTGAGAAGTTTAAGCATGTGGATGAGCAGTGTGATTTAAGTGGTACGATT
CATGATTTGCAGGTTAAGCATGAAGTTTTGCTTGACAAAAAATCTATGTTGGAAGCTGAG
ATTGAAGCTTTGCGAAAACTGAGATCATGGGTCGAGGATGAAGCGAGAAGAAGTCAAGCT
CGCGCTAAAGTTCTCGAGGAGGTTGAGCGAAGGTGGAAATGGGAGGAGCAATAG