Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002103
CDS Infomation

pacid=37443244 polypeptide=PGSC0003DMP400001529 locus=PGSC0003DMG400000802 ID=PGSC0003DMT400002103.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGAGAGTTCATCGGCCAGATCTAGTGGATCGTCGGCGGATTCGTACATCGGT
AGTTTGATTAGCTTGACTTCGAAGAGTGAGATCCGGTATGAAGGCATTCTCTATAACATC
AACACTGATGAGTCCAGTATCGGTCTACGCAATGTAAGATCATTTGGAACAGAGGGAAGA
AAAAAGGATGGGCCTCAAGTACCTCCAAGTGACAAGACTTATGAATACATACTTTTTCGT
GGAAGTGATATCAAGGATTTACAAGTTAAGTCTTCGCCACCTCTTCAACCTACACCACCT
ATAAATAACGACCCAGCTATTATACAGTCTCACTATCCTCGACCACCTACCACATCGGCA
AGTTTACCTGCTGCTGTTGGTGGATCTTTGACTGATCTAAGTTCCCATTCTGCACAGCCG
GGACATCCTGGCTCAACATTCCAAAGTGGCCTGCCTTTGTATCAACCTGGAGGTAATATG
GGATCTTGGGGTCCATCTCCTCCCCCTCCAAATGCCGGTGCTGGTGGACTTGCTATGCCA
ATGTATTGGCAAGGTTTTTATGGTGCACCCAATGGATTACCACAAATGCAGCAACAATCT
TTGCTTCGTCCTCCTCCTGGACTTGCCATGCCTCCTTCCATGCCGCAGATGCAGTTTTCT
GGTTTCAATTCGTCTTTGCCAACTGGAGGATCAAGCCTACAGGCGCCAAACTTCCCAGAA
TACCCTTCTTCATTGATGCCAACAACTACTAGTTTAACCTCTAGTTCTTTACCTGCTGCT
ACTTTGCCTTCAACTGTGCCATCGCTGCAACCTGTGGTACCTGTGACTGAAACAATATCC
AGTGCAATTTCAAAGAAGGCTTCTGTTTCTGCTATGCCCACTTCGACATTAAGTGCTAGT
TTACCGACTTTGCCTCCTTTGTCAACAAGTCCTGATGTAAATCCCGTTGTTCTGCCAGTA
TCTAATAAACCTAATCCAGTACCTAGCCCAGCTTTGTCTCAATCGGTATCTACTATTGTG
GAGACACCCACACCGTCGCTGATAACTCCAGGGCAGCTGCTGCAATCTGGACCAATTGAT
GTTCCATCAACTCAATCTATGCAGACATCTCAAAGAGATGTAGAAGTGGTTCAAGTATTG
CCTGCACCATCTTCAGAACCTCCAGCCCCTGCTAAAACAGAAGCTCAGCCACCAATATTA
CCATTACCATCCCAGACGCGTGTGCAGAAGACAAATGGAGCTCCATATCAGCCGCGTTAT
GTCAACTACAGAGGGCGTGGTGGAAGAGGAATGGGGGTTTCTAGACCAGTAACAAAGTTC
GAAGAAGATTTTGATTTTATGGCCATGAATGAGAAGTTCAAGAAAGATGAAGTATGGGGC
CATCTTGGCAAAAGTAACAGAGAAGGAGATGGAAATGACAGTGATGAGGATATCTCTTAC
AACGAATATGAGGATGATCTTCCTAAGATTGATGTCCAGCCTGTTTACAATAAGGATGAC
TTTTTCGACTCTTTGTCAAGTAATGCACTTGACCATGACTCAAATCATGGAAGGACCAGG
TTCTCCGAGCAAAGGAAGATAGATGTTGAGACATTCGGAGATTTCTCAAGATACAGGGGC
GGCCGGGGTGGTCGTGGTCCTGGACGTGGTGGACGTTCTCGAGGTTCATATTATGGAAGA
GGTGGAGGTGGATATGGATATGGATATGGAAACGGAAACGGGAATGGAAATGGATATGGT
TATGGTTATGGTGGTGGTAGGGGCAGAGGCCGTGGTGTGCCATCCCGTACTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001529
PEP Infomation

pacid=37443244 transcript=PGSC0003DMT400002103 locus=PGSC0003DMG400000802 ID=PGSC0003DMT400002103.v4.03 annot-version=v4.03
Sequence

MAAESSSARSSGSSADSYIGSLISLTSKSEIRYEGILYNINTDESSIGLRNVRSFGTEGR
KKDGPQVPPSDKTYEYILFRGSDIKDLQVKSSPPLQPTPPINNDPAIIQSHYPRPPTTSA
SLPAAVGGSLTDLSSHSAQPGHPGSTFQSGLPLYQPGGNMGSWGPSPPPPNAGAGGLAMP
MYWQGFYGAPNGLPQMQQQSLLRPPPGLAMPPSMPQMQFSGFNSSLPTGGSSLQAPNFPE
YPSSLMPTTTSLTSSSLPAATLPSTVPSLQPVVPVTETISSAISKKASVSAMPTSTLSAS
LPTLPPLSTSPDVNPVVLPVSNKPNPVPSPALSQSVSTIVETPTPSLITPGQLLQSGPID
VPSTQSMQTSQRDVEVVQVLPAPSSEPPAPAKTEAQPPILPLPSQTRVQKTNGAPYQPRY
VNYRGRGGRGMGVSRPVTKFEEDFDFMAMNEKFKKDEVWGHLGKSNREGDGNDSDEDISY
NEYEDDLPKIDVQPVYNKDDFFDSLSSNALDHDSNHGRTRFSEQRKIDVETFGDFSRYRG
GRGGRGPGRGGRSRGSYYGRGGGGYGYGYGNGNGNGNGYGYGYGGGRGRGRGVPSRTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400002103
Transcript Infomation

pacid=37443244 locus=PGSC0003DMG400000802 ID=PGSC0003DMT400002103.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGAGAGTTCATCGGCCAGATCTAGTGGATCGTCGGCGGATTCGTACATCGGT
AGTTTGATTAGCTTGACTTCGAAGAGTGAGATCCGGTATGAAGGCATTCTCTATAACATC
AACACTGATGAGTCCAGTATCGGTCTACGCAATGTAAGATCATTTGGAACAGAGGGAAGA
AAAAAGGATGGGCCTCAAGTACCTCCAAGTGACAAGACTTATGAATACATACTTTTTCGT
GGAAGTGATATCAAGGATTTACAAGTTAAGTCTTCGCCACCTCTTCAACCTACACCACCT
ATAAATAACGACCCAGCTATTATACAGTCTCACTATCCTCGACCACCTACCACATCGGCA
AGTTTACCTGCTGCTGTTGGTGGATCTTTGACTGATCTAAGTTCCCATTCTGCACAGCCG
GGACATCCTGGCTCAACATTCCAAAGTGGCCTGCCTTTGTATCAACCTGGAGGTAATATG
GGATCTTGGGGTCCATCTCCTCCCCCTCCAAATGCCGGTGCTGGTGGACTTGCTATGCCA
ATGTATTGGCAAGGTTTTTATGGTGCACCCAATGGATTACCACAAATGCAGCAACAATCT
TTGCTTCGTCCTCCTCCTGGACTTGCCATGCCTCCTTCCATGCCGCAGATGCAGTTTTCT
GGTTTCAATTCGTCTTTGCCAACTGGAGGATCAAGCCTACAGGCGCCAAACTTCCCAGAA
TACCCTTCTTCATTGATGCCAACAACTACTAGTTTAACCTCTAGTTCTTTACCTGCTGCT
ACTTTGCCTTCAACTGTGCCATCGCTGCAACCTGTGGTACCTGTGACTGAAACAATATCC
AGTGCAATTTCAAAGAAGGCTTCTGTTTCTGCTATGCCCACTTCGACATTAAGTGCTAGT
TTACCGACTTTGCCTCCTTTGTCAACAAGTCCTGATGTAAATCCCGTTGTTCTGCCAGTA
TCTAATAAACCTAATCCAGTACCTAGCCCAGCTTTGTCTCAATCGGTATCTACTATTGTG
GAGACACCCACACCGTCGCTGATAACTCCAGGGCAGCTGCTGCAATCTGGACCAATTGAT
GTTCCATCAACTCAATCTATGCAGACATCTCAAAGAGATGTAGAAGTGGTTCAAGTATTG
CCTGCACCATCTTCAGAACCTCCAGCCCCTGCTAAAACAGAAGCTCAGCCACCAATATTA
CCATTACCATCCCAGACGCGTGTGCAGAAGACAAATGGAGCTCCATATCAGCCGCGTTAT
GTCAACTACAGAGGGCGTGGTGGAAGAGGAATGGGGGTTTCTAGACCAGTAACAAAGTTC
GAAGAAGATTTTGATTTTATGGCCATGAATGAGAAGTTCAAGAAAGATGAAGTATGGGGC
CATCTTGGCAAAAGTAACAGAGAAGGAGATGGAAATGACAGTGATGAGGATATCTCTTAC
AACGAATATGAGGATGATCTTCCTAAGATTGATGTCCAGCCTGTTTACAATAAGGATGAC
TTTTTCGACTCTTTGTCAAGTAATGCACTTGACCATGACTCAAATCATGGAAGGACCAGG
TTCTCCGAGCAAAGGAAGATAGATGTTGAGACATTCGGAGATTTCTCAAGATACAGGGGC
GGCCGGGGTGGTCGTGGTCCTGGACGTGGTGGACGTTCTCGAGGTTCATATTATGGAAGA
GGTGGAGGTGGATATGGATATGGATATGGAAACGGAAACGGGAATGGAAATGGATATGGT
TATGGTTATGGTGGTGGTAGGGGCAGAGGCCGTGGTGTGCCATCCCGTACTTTGTAA