Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002081
CDS Infomation

pacid=37475027 polypeptide=PGSC0003DMP400001515 locus=PGSC0003DMG400000792 ID=PGSC0003DMT400002081.v4.03 annot-version=v4.03
Sequence

ATGGCAGATCTTGTTAGCTATGGTGATGCCGACCGTGATATTGAGCAGGCACTAATTGCT
TTAAAGAAAGGAGCTCAACTGTTGAAATATGGACGCAAAGGGAAGCCCAAGTTCTATCCA
TTTAGACTTTCTAATGATGAATTATCTTTAGTTTGGATCTCTAGCAGTGGTGAAAAGAGT
TTAAAGTTAGCTTCAGTATCAAGAATCATTCCTGGGCAAAGAACTGCTGTTTTTCGACGT
TATCTTCGTCCTGAAAAGGATTACTTGTCCTTCTCTCTCATATACAATTACGGAAAAAGA
TCCCTTGATCTGATCTGTAAGGACAAGGTTGAGGCAGAGTTCTGGATTACTGGCCTAAAA
GCTTTGATATCTTCTGGACAAGGTGGACGCTCAAAGGTTGACGGTTGGAGTGATGGAGGC
CTCTACTTTGATGATAGTCGAGATTTGACATCAAATAGTCCAAGTTCTAGTTCTGTTAGT
GCTACAAAAGAAATTAGCTCTCCAGACGCTTCCTTAAGTTCCAACCCTAATACTTCTCCT
AAGAGCCATCAACCTTATAACTTTGTGCAGTCTGAAAGGTCACATGTAGCTTTGGATCAA
GCAAATATGCAGAATATTCAAGCCAAAGGATCTGCTTCAGACGTGTTCCGAGTTAGTGTT
TCCAGTGCCCCCAGTACTTCTAGTCATGGTTCTGCACCAGATGATTGCGATGCTTTGGGT
GATGTTTATATATGGGGTGAGGTAATATGTGATAATATTGTCAAGGTTGGACCTGAAAAA
AATTCCAGTACGGTGAGCACAAGGGCAGATGTGCTTGTTCCAAGACCACTGGAATCCAAT
GTAGTTTTGGATGTTCATCATATAGCTTGTGGGGTCAAGCATGCTGCCCTTGTCACCAGG
CAAGGTGAAATCTTTACATGGGGTGAAGAATCTGGTGGCCGACTCGGCCATGGTGTTGGG
AAAGATGTCACTCAACCTCGGTTTGTTGAATCATTGTCCCTTTGCAACATTGACTTTGTT
GCATGTGGTGAGTTTCACACCTGCGCTGTTACAATGGCTGGTGAATTATATACTTGGGGG
GATGGCACACACAATGCTGGGCTTCTAGGTAATGGCACTGATGTCAGCCACTGGATACCA
AAGAGAATATCAGGCCCTCTGGAAGGACTTCAAGTTGCATCAGTAACATGCGGTCCATGG
CATACTGCTTTAATAACATCAACTGGGCAGCTCTTCACATTTGGGGATGGAACATTTGGT
GTTTTAGGCCATGGTGATAGGGAAAATGTATTGTTCCCCAGGGAGGTGAAGTCTTTGTCA
GGTCTGAGGACAATTGCCGCTGCATGTGGAGTATGGCATACTGCTGCTGTAGTTGAAGTT
ATCGTGACGCAGTCTAGTGCTAGTGTTTCATCTGGAAAATTATTTACTTGGGGAGATGGA
GATAAAAACCGTCTTGGACATGGTGATAAAGAACCTCGACTGGAACCTACTTGTGTACCT
GCACTTATTGATTACAATTTTCACAAAATTGCTTGTGGGCATAGTTTAACTGTCTGCTTG
ACCACATCTGGCCATGTTTTTACAATGGGAAGTACCGTATATGGACAACTTGGAAATCCT
TATTCTGATGGGAAGTTGCCTTGTCTGGTTGAAGACAAACTTTTGGGGGAAATTGTTGAA
GATATTGCTTGCGGTTCATACCATGTAGCTGTTTTGACATCCAAAAATGAGGTTTATACG
TGGGGCAAGGGAGCCAATGGGAGATTGGGTCACGGGGATGTAGAGGACAGGAAAGCCCCC
ACTTTGGTTGAGGCTTTGAAGGATAGACATGTGAAATATATTTCTTGTGGTTCTAATTAC
ACTGCTGCGATATGTCTTCACAAATGGGTTTCTGGTGCTGAGCAGTCCCAGTGTTCAGCC
TGTAGACAGGCTTTTGGCTTCACAAGGAAACGGCACAATTGCTACAACTGCGGGCTTGTG
CATTGCCATGCATGTACTTCAAGAAAAGCAATAAGGGCAGCATTGGCTCCAAATCCAAAC
AAACCATATCGTGTATGTGATTCTTGTTTTACAAAACTGAGTAAGGTTGCTGAGATCGGA
ATCAATAACAGGAGAAGTGCCGGACCTCGCCTTTCTGGTGAGAACAAGGACAGGCTGGAC
AAGGCTGATATACGATCAGCAAAATCAGGAATGCCCCCCAATATTGATTTGATCAAGCAG
CTAGATAGTAAAGCAGTCAAACAGGGGAAAAAAGCTGATACGTTTTCCTTGGGTCGTTCT
TCTCAAGCTCCTTTGTTACAGCTGAAAGATGTAGTGTCGACCACTGGAGATCTGCGTTGG
GCAGTTCCAAAACCAGTTATGATCCAATCGGGTGTTAGTTCCAGATCTGTGTCACCTTTC
TCTAGGAAGCCAAGTCCACCACGCTCAGCAACACCCGTACCTACCACTGCAGGACTTTCA
TTCTCCAAAAGCATTGCTGACAGTTTGAAGAAAACCAATGAGCTTTTAAATCAGGAAGTT
CACAAACTACGGGCTCAGGTTGAGAACCTGAGACATCGTTGTGAACTTCAGGAGTCGGAG
CTGCAGAAATCAACAAAAAAAGCCCAGGAAGCAATGGCTTTGGCGGCCGAGGAATCTGCT
AAAAGCAAAGCTGCAAAAGAAGCTATGAAGTCGCTGATGGCGCAGCTCAAAGACATGGCT
GAAAGGTTGCCACCTGGGGCTTATGACGTAGAGAGCCTCAAACTAGCTTACCTACCGAAT
GGTTTGGACTCAAATGGCATTCACTATCCTGACGCTAATGGGGAACGCCATTCGAGATCT
GATTCTGTCACTAGCTCGTACATGGCCTCTCAAACCAGCATGGACTTTAGTACATATGGA
ATGCAAAGCCCTACCAGATACCAAAGGGATTCTGGTAGCATTGAAGCAATTACAAACAAT
CAAATCCTGACCTCCAATGGTACAGATGATCGAGGTGAAGTTAGACTGCCTAATGGTAGC
GAGGCACAGGTGAACATCAATAGTGCATCTCAAGCTGTCGATAATGAAGACGCTGAATCC
TTACAAGACAATGGAAATGGATTGAAATCAAGAAATTCTCTGCCTTCTGGCAACCCTAAC
CAAATTGAGGCTGAATGGATTGAACAATACGAGCCTGGAGTGTATATTACCCTAATGGCT
CTTCGAGATGGCACTAGAGATCTCAAACGAGTTCGCTTCAGCCGCAGAAGATTCGGGGAG
CACCAAGCGGAGACTTGGTGGTCAGAGAACCGTGACAAAGTTTACGAGAGATATAATGTT
CGTGGTTCAGACAAGTCATCGGTTACAGGCCAGGCTGCTCGGAGGTCTGAAGGGGGTCTC
TCTCCATCTTCCCAAATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001515
PEP Infomation

pacid=37475027 transcript=PGSC0003DMT400002081 locus=PGSC0003DMG400000792 ID=PGSC0003DMT400002081.v4.03 annot-version=v4.03
Sequence

MADLVSYGDADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDELSLVWISSSGEKS
LKLASVSRIIPGQRTAVFRRYLRPEKDYLSFSLIYNYGKRSLDLICKDKVEAEFWITGLK
ALISSGQGGRSKVDGWSDGGLYFDDSRDLTSNSPSSSSVSATKEISSPDASLSSNPNTSP
KSHQPYNFVQSERSHVALDQANMQNIQAKGSASDVFRVSVSSAPSTSSHGSAPDDCDALG
DVYIWGEVICDNIVKVGPEKNSSTVSTRADVLVPRPLESNVVLDVHHIACGVKHAALVTR
QGEIFTWGEESGGRLGHGVGKDVTQPRFVESLSLCNIDFVACGEFHTCAVTMAGELYTWG
DGTHNAGLLGNGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG
VLGHGDRENVLFPREVKSLSGLRTIAAACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG
DKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVCLTTSGHVFTMGSTVYGQLGNP
YSDGKLPCLVEDKLLGEIVEDIACGSYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKAP
TLVEALKDRHVKYISCGSNYTAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLV
HCHACTSRKAIRAALAPNPNKPYRVCDSCFTKLSKVAEIGINNRRSAGPRLSGENKDRLD
KADIRSAKSGMPPNIDLIKQLDSKAVKQGKKADTFSLGRSSQAPLLQLKDVVSTTGDLRW
AVPKPVMIQSGVSSRSVSPFSRKPSPPRSATPVPTTAGLSFSKSIADSLKKTNELLNQEV
HKLRAQVENLRHRCELQESELQKSTKKAQEAMALAAEESAKSKAAKEAMKSLMAQLKDMA
ERLPPGAYDVESLKLAYLPNGLDSNGIHYPDANGERHSRSDSVTSSYMASQTSMDFSTYG
MQSPTRYQRDSGSIEAITNNQILTSNGTDDRGEVRLPNGSEAQVNINSASQAVDNEDAES
LQDNGNGLKSRNSLPSGNPNQIEAEWIEQYEPGVYITLMALRDGTRDLKRVRFSRRRFGE
HQAETWWSENRDKVYERYNVRGSDKSSVTGQAARRSEGGLSPSSQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400002081
Transcript Infomation

pacid=37475027 locus=PGSC0003DMG400000792 ID=PGSC0003DMT400002081.v4.03 annot-version=v4.03
Sequence

ATGGCAGATCTTGTTAGCTATGGTGATGCCGACCGTGATATTGAGCAGGCACTAATTGCT
TTAAAGAAAGGAGCTCAACTGTTGAAATATGGACGCAAAGGGAAGCCCAAGTTCTATCCA
TTTAGACTTTCTAATGATGAATTATCTTTAGTTTGGATCTCTAGCAGTGGTGAAAAGAGT
TTAAAGTTAGCTTCAGTATCAAGAATCATTCCTGGGCAAAGAACTGCTGTTTTTCGACGT
TATCTTCGTCCTGAAAAGGATTACTTGTCCTTCTCTCTCATATACAATTACGGAAAAAGA
TCCCTTGATCTGATCTGTAAGGACAAGGTTGAGGCAGAGTTCTGGATTACTGGCCTAAAA
GCTTTGATATCTTCTGGACAAGGTGGACGCTCAAAGGTTGACGGTTGGAGTGATGGAGGC
CTCTACTTTGATGATAGTCGAGATTTGACATCAAATAGTCCAAGTTCTAGTTCTGTTAGT
GCTACAAAAGAAATTAGCTCTCCAGACGCTTCCTTAAGTTCCAACCCTAATACTTCTCCT
AAGAGCCATCAACCTTATAACTTTGTGCAGTCTGAAAGGTCACATGTAGCTTTGGATCAA
GCAAATATGCAGAATATTCAAGCCAAAGGATCTGCTTCAGACGTGTTCCGAGTTAGTGTT
TCCAGTGCCCCCAGTACTTCTAGTCATGGTTCTGCACCAGATGATTGCGATGCTTTGGGT
GATGTTTATATATGGGGTGAGGTAATATGTGATAATATTGTCAAGGTTGGACCTGAAAAA
AATTCCAGTACGGTGAGCACAAGGGCAGATGTGCTTGTTCCAAGACCACTGGAATCCAAT
GTAGTTTTGGATGTTCATCATATAGCTTGTGGGGTCAAGCATGCTGCCCTTGTCACCAGG
CAAGGTGAAATCTTTACATGGGGTGAAGAATCTGGTGGCCGACTCGGCCATGGTGTTGGG
AAAGATGTCACTCAACCTCGGTTTGTTGAATCATTGTCCCTTTGCAACATTGACTTTGTT
GCATGTGGTGAGTTTCACACCTGCGCTGTTACAATGGCTGGTGAATTATATACTTGGGGG
GATGGCACACACAATGCTGGGCTTCTAGGTAATGGCACTGATGTCAGCCACTGGATACCA
AAGAGAATATCAGGCCCTCTGGAAGGACTTCAAGTTGCATCAGTAACATGCGGTCCATGG
CATACTGCTTTAATAACATCAACTGGGCAGCTCTTCACATTTGGGGATGGAACATTTGGT
GTTTTAGGCCATGGTGATAGGGAAAATGTATTGTTCCCCAGGGAGGTGAAGTCTTTGTCA
GGTCTGAGGACAATTGCCGCTGCATGTGGAGTATGGCATACTGCTGCTGTAGTTGAAGTT
ATCGTGACGCAGTCTAGTGCTAGTGTTTCATCTGGAAAATTATTTACTTGGGGAGATGGA
GATAAAAACCGTCTTGGACATGGTGATAAAGAACCTCGACTGGAACCTACTTGTGTACCT
GCACTTATTGATTACAATTTTCACAAAATTGCTTGTGGGCATAGTTTAACTGTCTGCTTG
ACCACATCTGGCCATGTTTTTACAATGGGAAGTACCGTATATGGACAACTTGGAAATCCT
TATTCTGATGGGAAGTTGCCTTGTCTGGTTGAAGACAAACTTTTGGGGGAAATTGTTGAA
GATATTGCTTGCGGTTCATACCATGTAGCTGTTTTGACATCCAAAAATGAGGTTTATACG
TGGGGCAAGGGAGCCAATGGGAGATTGGGTCACGGGGATGTAGAGGACAGGAAAGCCCCC
ACTTTGGTTGAGGCTTTGAAGGATAGACATGTGAAATATATTTCTTGTGGTTCTAATTAC
ACTGCTGCGATATGTCTTCACAAATGGGTTTCTGGTGCTGAGCAGTCCCAGTGTTCAGCC
TGTAGACAGGCTTTTGGCTTCACAAGGAAACGGCACAATTGCTACAACTGCGGGCTTGTG
CATTGCCATGCATGTACTTCAAGAAAAGCAATAAGGGCAGCATTGGCTCCAAATCCAAAC
AAACCATATCGTGTATGTGATTCTTGTTTTACAAAACTGAGTAAGGTTGCTGAGATCGGA
ATCAATAACAGGAGAAGTGCCGGACCTCGCCTTTCTGGTGAGAACAAGGACAGGCTGGAC
AAGGCTGATATACGATCAGCAAAATCAGGAATGCCCCCCAATATTGATTTGATCAAGCAG
CTAGATAGTAAAGCAGTCAAACAGGGGAAAAAAGCTGATACGTTTTCCTTGGGTCGTTCT
TCTCAAGCTCCTTTGTTACAGCTGAAAGATGTAGTGTCGACCACTGGAGATCTGCGTTGG
GCAGTTCCAAAACCAGTTATGATCCAATCGGGTGTTAGTTCCAGATCTGTGTCACCTTTC
TCTAGGAAGCCAAGTCCACCACGCTCAGCAACACCCGTACCTACCACTGCAGGACTTTCA
TTCTCCAAAAGCATTGCTGACAGTTTGAAGAAAACCAATGAGCTTTTAAATCAGGAAGTT
CACAAACTACGGGCTCAGGTTGAGAACCTGAGACATCGTTGTGAACTTCAGGAGTCGGAG
CTGCAGAAATCAACAAAAAAAGCCCAGGAAGCAATGGCTTTGGCGGCCGAGGAATCTGCT
AAAAGCAAAGCTGCAAAAGAAGCTATGAAGTCGCTGATGGCGCAGCTCAAAGACATGGCT
GAAAGGTTGCCACCTGGGGCTTATGACGTAGAGAGCCTCAAACTAGCTTACCTACCGAAT
GGTTTGGACTCAAATGGCATTCACTATCCTGACGCTAATGGGGAACGCCATTCGAGATCT
GATTCTGTCACTAGCTCGTACATGGCCTCTCAAACCAGCATGGACTTTAGTACATATGGA
ATGCAAAGCCCTACCAGATACCAAAGGGATTCTGGTAGCATTGAAGCAATTACAAACAAT
CAAATCCTGACCTCCAATGGTACAGATGATCGAGGTGAAGTTAGACTGCCTAATGGTAGC
GAGGCACAGGTGAACATCAATAGTGCATCTCAAGCTGTCGATAATGAAGACGCTGAATCC
TTACAAGACAATGGAAATGGATTGAAATCAAGAAATTCTCTGCCTTCTGGCAACCCTAAC
CAAATTGAGGCTGAATGGATTGAACAATACGAGCCTGGAGTGTATATTACCCTAATGGCT
CTTCGAGATGGCACTAGAGATCTCAAACGAGTTCGCTTCAGCCGCAGAAGATTCGGGGAG
CACCAAGCGGAGACTTGGTGGTCAGAGAACCGTGACAAAGTTTACGAGAGATATAATGTT
CGTGGTTCAGACAAGTCATCGGTTACAGGCCAGGCTGCTCGGAGGTCTGAAGGGGGTCTC
TCTCCATCTTCCCAAATTTAG