Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002067
CDS Infomation

pacid=37475661 polypeptide=PGSC0003DMP400001509 locus=PGSC0003DMG400000789 ID=PGSC0003DMT400002067.v4.03 annot-version=v4.03
Sequence

ATGCGTTTTTGTTTGCAAAATCTCACAAGGGTCACTCTGTTCTTCATCTTCACCATAAAT
TCACCTTCCCTTTCAGCTCCTTTCTTGCCTATAAACAATGTAACTCTTTATGGCGATGCT
TCATTCACCGCAAAATCAATCACCCTCACCCAAGAACGCAACTGTTCATCATCATCATCA
ACACCTCCCATTTCTGGCATTGGAAGAGCTTTCTACACATACCCAGTTCGTTTTCTTGAT
TCTTTAACCAATAACACTGCTTCTTTCTTGTGTACTTTCTCTTTTACTATACTTCCAACC
CCTTCTTGCCCTTTTGGTGATGGCATGGGGTTTTTGGTCACTTCTGATGTTGATTCTTTG
AGCATCTCTGATGGGTATATGGGTCTTCCGAATCCCGACTCGGAAGATTCCTTCTTGGCT
GTGGAATTCAATGCCAATGATAACCGTATTGGTGTTGATACTAAAGAAATTAGGTCTTTG
GCTTCTACTAATGTTGATTCAGCTGGGATTGATTTGAAAAGTGGGAAAGAAATGGCGGGT
CGGATTGAGTATAAAGATTCAGAGAAAATGATCAGAGTTTGGATTGGGTATGAACTGCAA
ATTAGGCCTCCTAATCCTGTTCTTTCTACCAGAATTGATGTTTCCAATCAGTTGAAGGAG
TTTATGAGGATTGGTTTCACTGCTAAAGGGTCTGCAGTTTATAGCATTAGTCGTTGGCGA
TTTAGAACGTTTGGATTGATTTCGTCTCCAATATCATCGTCTTGGGATCAATCCGATGAA
GGAAACTGTTTGATGTGTTTCCCTGAAGAGGAAATTGGTGGGCATATTTCTGATTCTCAT
CATAGTAGTAGTAGTAGTGGTAGTAAAAGTTTACTGAAATTGACTTATGGAGGGTTAGCT
GCAATTGTCACACTTGTTGGTTGTGCTTTGTCTGTTGTGTTTGTTCTTGCGTTGAGAAGG
AAAAAACGCGATAGAGTAGGGGAGACCAATGAACGGCAAATGTGTAGATTACAAGGAAAT
AGAGTGCCTCAAAGATTGTCATTATCTGAAATAAAATCAGCTACAGAGTGTTTTAATCAT
GAAAGGATAATCGGAGAAGGAGCATCTGCTGTTGTGTATGAAGGGGAAATTCCTTCTAGG
GGATCTGTGGCTGTTAAGAGATTTGTCCAAGGGAGTAGATTGGGTCCTTCACATATTCCT
TTTAATACTGAATTTGCTTCTATGGTTGGCTGTTTAAGACACAAGAATTTGATTCAGCTT
CAAGGGTGGTGTTGTGAGAGGAATGAATTGGTGCTAGTGTATGAATTCATGCCTAATGGT
AGCCTTGACAAAATCCTCCACGAGCGATCGCATTTGACTAAGTTTCTGACATGGGAGAGA
AGATTGAACATAGTTATTGGTGTGTCATCTGCTCTTATGTATCTTCATGAAGAGTGTGAG
AATCATATAATCCACAGAGATGTGAAGAGTTGCAATATAATGCTTGATGCTGAGTTCAAT
GCCAAGCTTGGAGATTTCGGTTTAGCAGAGGTGTTTGATAATTCTAAGACAAGGGATGCT
ACTGTACCAGCTGGAACAATGGGATATTTTGCACCTGAGTATGTCTATACTGGTATTCCA
ACTGTTAAAACAGATGTGTATAGCTTTGGTGTTGTGGTACTGGAAGTGGCATCAGGTAGA
AAGCCTATCGACGAAGGTGGTGGTTTGATTACTGATTGGGTGTGGGACTTGTGGGAGAAA
GGGAGGATAACTGAGGCTGCTGATCCTAAACTAATGGGGCGGTTTCAGAAGAATGAAATG
GATAGAATGCTCATTGTGGGACTTTCTTGTGTGCATCCCGATCATGAGAAGAGACCGCGA
ATGAGAGATGTTTTCCGTATGCTTAAAGATGAAGCTCCACTTCTCATTTTACCTCCAATG
AAGCCCACTGTGAGAATTCAATCTGTTTTACCAGAGAGCTGTGAAGAAATCATGAATTGG
GCTGCAAGAATGGAGGATACACCATGGTCCACTCCCAGAACTCATTTTAGCAAGAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001509
PEP Infomation

pacid=37475661 transcript=PGSC0003DMT400002067 locus=PGSC0003DMG400000789 ID=PGSC0003DMT400002067.v4.03 annot-version=v4.03
Sequence

MRFCLQNLTRVTLFFIFTINSPSLSAPFLPINNVTLYGDASFTAKSITLTQERNCSSSSS
TPPISGIGRAFYTYPVRFLDSLTNNTASFLCTFSFTILPTPSCPFGDGMGFLVTSDVDSL
SISDGYMGLPNPDSEDSFLAVEFNANDNRIGVDTKEIRSLASTNVDSAGIDLKSGKEMAG
RIEYKDSEKMIRVWIGYELQIRPPNPVLSTRIDVSNQLKEFMRIGFTAKGSAVYSISRWR
FRTFGLISSPISSSWDQSDEGNCLMCFPEEEIGGHISDSHHSSSSSGSKSLLKLTYGGLA
AIVTLVGCALSVVFVLALRRKKRDRVGETNERQMCRLQGNRVPQRLSLSEIKSATECFNH
ERIIGEGASAVVYEGEIPSRGSVAVKRFVQGSRLGPSHIPFNTEFASMVGCLRHKNLIQL
QGWCCERNELVLVYEFMPNGSLDKILHERSHLTKFLTWERRLNIVIGVSSALMYLHEECE
NHIIHRDVKSCNIMLDAEFNAKLGDFGLAEVFDNSKTRDATVPAGTMGYFAPEYVYTGIP
TVKTDVYSFGVVVLEVASGRKPIDEGGGLITDWVWDLWEKGRITEAADPKLMGRFQKNEM
DRMLIVGLSCVHPDHEKRPRMRDVFRMLKDEAPLLILPPMKPTVRIQSVLPESCEEIMNW
AARMEDTPWSTPRTHFSKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400002067
Transcript Infomation

pacid=37475661 locus=PGSC0003DMG400000789 ID=PGSC0003DMT400002067.v4.03 annot-version=v4.03
Sequence

ATGCGTTTTTGTTTGCAAAATCTCACAAGGGTCACTCTGTTCTTCATCTTCACCATAAAT
TCACCTTCCCTTTCAGCTCCTTTCTTGCCTATAAACAATGTAACTCTTTATGGCGATGCT
TCATTCACCGCAAAATCAATCACCCTCACCCAAGAACGCAACTGTTCATCATCATCATCA
ACACCTCCCATTTCTGGCATTGGAAGAGCTTTCTACACATACCCAGTTCGTTTTCTTGAT
TCTTTAACCAATAACACTGCTTCTTTCTTGTGTACTTTCTCTTTTACTATACTTCCAACC
CCTTCTTGCCCTTTTGGTGATGGCATGGGGTTTTTGGTCACTTCTGATGTTGATTCTTTG
AGCATCTCTGATGGGTATATGGGTCTTCCGAATCCCGACTCGGAAGATTCCTTCTTGGCT
GTGGAATTCAATGCCAATGATAACCGTATTGGTGTTGATACTAAAGAAATTAGGTCTTTG
GCTTCTACTAATGTTGATTCAGCTGGGATTGATTTGAAAAGTGGGAAAGAAATGGCGGGT
CGGATTGAGTATAAAGATTCAGAGAAAATGATCAGAGTTTGGATTGGGTATGAACTGCAA
ATTAGGCCTCCTAATCCTGTTCTTTCTACCAGAATTGATGTTTCCAATCAGTTGAAGGAG
TTTATGAGGATTGGTTTCACTGCTAAAGGGTCTGCAGTTTATAGCATTAGTCGTTGGCGA
TTTAGAACGTTTGGATTGATTTCGTCTCCAATATCATCGTCTTGGGATCAATCCGATGAA
GGAAACTGTTTGATGTGTTTCCCTGAAGAGGAAATTGGTGGGCATATTTCTGATTCTCAT
CATAGTAGTAGTAGTAGTGGTAGTAAAAGTTTACTGAAATTGACTTATGGAGGGTTAGCT
GCAATTGTCACACTTGTTGGTTGTGCTTTGTCTGTTGTGTTTGTTCTTGCGTTGAGAAGG
AAAAAACGCGATAGAGTAGGGGAGACCAATGAACGGCAAATGTGTAGATTACAAGGAAAT
AGAGTGCCTCAAAGATTGTCATTATCTGAAATAAAATCAGCTACAGAGTGTTTTAATCAT
GAAAGGATAATCGGAGAAGGAGCATCTGCTGTTGTGTATGAAGGGGAAATTCCTTCTAGG
GGATCTGTGGCTGTTAAGAGATTTGTCCAAGGGAGTAGATTGGGTCCTTCACATATTCCT
TTTAATACTGAATTTGCTTCTATGGTTGGCTGTTTAAGACACAAGAATTTGATTCAGCTT
CAAGGGTGGTGTTGTGAGAGGAATGAATTGGTGCTAGTGTATGAATTCATGCCTAATGGT
AGCCTTGACAAAATCCTCCACGAGCGATCGCATTTGACTAAGTTTCTGACATGGGAGAGA
AGATTGAACATAGTTATTGGTGTGTCATCTGCTCTTATGTATCTTCATGAAGAGTGTGAG
AATCATATAATCCACAGAGATGTGAAGAGTTGCAATATAATGCTTGATGCTGAGTTCAAT
GCCAAGCTTGGAGATTTCGGTTTAGCAGAGGTGTTTGATAATTCTAAGACAAGGGATGCT
ACTGTACCAGCTGGAACAATGGGATATTTTGCACCTGAGTATGTCTATACTGGTATTCCA
ACTGTTAAAACAGATGTGTATAGCTTTGGTGTTGTGGTACTGGAAGTGGCATCAGGTAGA
AAGCCTATCGACGAAGGTGGTGGTTTGATTACTGATTGGGTGTGGGACTTGTGGGAGAAA
GGGAGGATAACTGAGGCTGCTGATCCTAAACTAATGGGGCGGTTTCAGAAGAATGAAATG
GATAGAATGCTCATTGTGGGACTTTCTTGTGTGCATCCCGATCATGAGAAGAGACCGCGA
ATGAGAGATGTTTTCCGTATGCTTAAAGATGAAGCTCCACTTCTCATTTTACCTCCAATG
AAGCCCACTGTGAGAATTCAATCTGTTTTACCAGAGAGCTGTGAAGAAATCATGAATTGG
GCTGCAAGAATGGAGGATACACCATGGTCCACTCCCAGAACTCATTTTAGCAAGAACTAG