Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002062
CDS Infomation

pacid=37473575 polypeptide=PGSC0003DMP400001505 locus=PGSC0003DMG400000787 ID=PGSC0003DMT400002062.v4.03 annot-version=v4.03
Sequence

ATGGAGCATGAACTAGATCACTCCAAGAGCATTGACAAGGAAGAGGCTGTCATCATGCAG
AATATCGATGGGGATGAGATTTTCCCACCTGAAAAAAACAGGAATAGTTTTTGCATAAGG
AAAATAGAAGGCAATAAAAAGACTAAGACACGCTTAATGAAGATGCGAAGCCTAGACTCT
GCAGAGGAATCACCAGTACATGGAAAATCCTTGTGTCATGCAAGATCATTTAGTTCTCAT
TTTCTAATAAACATAGATGAGATGATGAGTGATATTGATAATGAAAAAGGTGCACTTTTA
AGCAAGACTCCAAGTGGGAAAATGGGATCTTTCTCATCCGATCGATCCCCCATTTCCTCA
TCAAGCATCTCTGATGACGTGACGTTAGAAAATTCACAAAAAAAGAACAATATATTGAAA
TCGAAGGATCAGGAGGATGACGATTCATGCAGCTGGAATAGAATTCAGATTGAGCCTACC
TTGCGTATACGTCTCAAGTTTCAAGATGTGAAGTACACCGTGGCACTGAAGGGAGTGGAG
AATTCTGATACAGAAAAGTGCATACTTCAAGGAGTGAGTGGTTCAGCCTGTCCAGGAGAA
ATTCTCGCGTTAATGGGACCTTCGGGTGGTGGTAAAACAACCTTACTCAAGCTTCTAAGT
GGAAAGGTGAAAAATGATTGTGGCACGATTACTTTCAATGACCAGCCATATAACAAGTCA
TTGAAACAAAGGATCGGGTTTGTGCTGCAAGATGATGTTGTTTTTCCCCATCTCACTGTG
AAAGAAACCTTAACATACGCTGCTTTGCTTCGTCTACCTAATACGTTATCTAAAGAGCAG
AAGAAAGAGAGAGCTATTGGAGTTATAAATGAGCTTGGCCTAGAAAGGTGTCAAGACACT
ATAATTGGAGGGGCATTTGTTAGAGGAGTTTCAGGAGGCGAAAGGAAACGAGTATGCATT
GGAAATGAAATTCTTCTGAATCCATCACTTTTGTTCCTAGATGAACCAACATCTGGTCTG
GATTCAACCACAGCACTTCGAATTATGCAGATGTTACGTAACACTGCCAGGGCTGGAAAG
ACAGTGGTAACAACAATACATCAGCCATCGAGTCGACTATTCAGCAGATTCGATAAGTTG
ATTCTATTAGGACAAGGCAGCTCATTGTATTTTGGCAAAGCCTCTGAGGCAATGCTGTAT
TTCTCTTCAATTGGTTGTTCTCCCCTTATAGCCATGAATCCAGCAGAGTTTCTAATTGAT
CTTGCAAATGGAAATATAACGGAAAAGTCTATACCTTCAGATCTAGAGGACAAGCTTTTA
CCAGGAAACCATCATTTCAAAATGCAAAATGAAGGACCTTCCCCAGCTGATGTTCATGAG
TATTTCGTTGGGGCTTATGAGTCGAGGGTTGCCAACATAGAGAAACTAAAACTCCTGAAG
CATGGCCTGATAGAAGAAGATTCTGAAGTGCAGAATTGGCCTAATTCAAGAGATTCTGGT
GCAACCTGGTGCCAACAGTTTACAATTCTTTTCGGAAGAAGTCTCAAGGAGCGAAACCAC
GAGTATTTCAGCTGTCTCCGGATAACTCAAGTCATAGCAACAGCTATAATTGTTGGCTTA
CTATGGTGGAATTCAGATACTTCATTCCCTAAAAGAATTTCAGATCAGGCAGGGTTGTTA
TTCTTTATTTCAGTATTTTGGGGTTTCTTTCCACTATTTACAGCAATCTTCACATTCCCA
CAAGAAAGGGCTATGTTGGTTAAAGAGAGATCAGTGAATATGTACAAGCTTAGTGCCTAT
TTCATAGCCAGAATCACCACTGATCTTCTCCTGGACCTAGTGTTGCCTGTAACATTCTTG
GTGATTGTCTATTTTATGGTTGGATTGAAGCTGACATTCAATGCATTTTCTTTAACTCTG
CTCACAATTTTACTAAGCATAATTGCTGCTCAGGGCTTAGGTTTGGCTATAGGTGCAGCA
TTCATGGATGTGAAAAAAGCAACAACTTTTGCTTCTGTTATCCTCATGACATTCATGTTG
TCTGGAGGATTCTTTGTCCAGGAAGTTCCAGCATTCATGTCATGGGTTCGTTATATCTCG
ATTAACTATCACACATACAGGCTTCTCTTAAAGATTCAGTTCAAATCCTTGAGAAATTCA
AAGTATGGCTCTGTTGATGACTCTAGTGGAGTTGAAGTAGGAGCAATGTTGGTGATGGTT
ATTGGATATAGGGTGTTAGCCTACTTCTTCCTAAGAAAAATGAAACTAAGAACAAGTACA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400001505
PEP Infomation

pacid=37473575 transcript=PGSC0003DMT400002062 locus=PGSC0003DMG400000787 ID=PGSC0003DMT400002062.v4.03 annot-version=v4.03
Sequence

MEHELDHSKSIDKEEAVIMQNIDGDEIFPPEKNRNSFCIRKIEGNKKTKTRLMKMRSLDS
AEESPVHGKSLCHARSFSSHFLINIDEMMSDIDNEKGALLSKTPSGKMGSFSSDRSPISS
SSISDDVTLENSQKKNNILKSKDQEDDDSCSWNRIQIEPTLRIRLKFQDVKYTVALKGVE
NSDTEKCILQGVSGSACPGEILALMGPSGGGKTTLLKLLSGKVKNDCGTITFNDQPYNKS
LKQRIGFVLQDDVVFPHLTVKETLTYAALLRLPNTLSKEQKKERAIGVINELGLERCQDT
IIGGAFVRGVSGGERKRVCIGNEILLNPSLLFLDEPTSGLDSTTALRIMQMLRNTARAGK
TVVTTIHQPSSRLFSRFDKLILLGQGSSLYFGKASEAMLYFSSIGCSPLIAMNPAEFLID
LANGNITEKSIPSDLEDKLLPGNHHFKMQNEGPSPADVHEYFVGAYESRVANIEKLKLLK
HGLIEEDSEVQNWPNSRDSGATWCQQFTILFGRSLKERNHEYFSCLRITQVIATAIIVGL
LWWNSDTSFPKRISDQAGLLFFISVFWGFFPLFTAIFTFPQERAMLVKERSVNMYKLSAY
FIARITTDLLLDLVLPVTFLVIVYFMVGLKLTFNAFSLTLLTILLSIIAAQGLGLAIGAA
FMDVKKATTFASVILMTFMLSGGFFVQEVPAFMSWVRYISINYHTYRLLLKIQFKSLRNS
KYGSVDDSSGVEVGAMLVMVIGYRVLAYFFLRKMKLRTST*

Transcript Sequence

Transcript ID

PGSC0003DMT400002062
Transcript Infomation

pacid=37473575 locus=PGSC0003DMG400000787 ID=PGSC0003DMT400002062.v4.03 annot-version=v4.03
Sequence

ATGGAGCATGAACTAGATCACTCCAAGAGCATTGACAAGGAAGAGGCTGTCATCATGCAG
AATATCGATGGGGATGAGATTTTCCCACCTGAAAAAAACAGGAATAGTTTTTGCATAAGG
AAAATAGAAGGCAATAAAAAGACTAAGACACGCTTAATGAAGATGCGAAGCCTAGACTCT
GCAGAGGAATCACCAGTACATGGAAAATCCTTGTGTCATGCAAGATCATTTAGTTCTCAT
TTTCTAATAAACATAGATGAGATGATGAGTGATATTGATAATGAAAAAGGTGCACTTTTA
AGCAAGACTCCAAGTGGGAAAATGGGATCTTTCTCATCCGATCGATCCCCCATTTCCTCA
TCAAGCATCTCTGATGACGTGACGTTAGAAAATTCACAAAAAAAGAACAATATATTGAAA
TCGAAGGATCAGGAGGATGACGATTCATGCAGCTGGAATAGAATTCAGATTGAGCCTACC
TTGCGTATACGTCTCAAGTTTCAAGATGTGAAGTACACCGTGGCACTGAAGGGAGTGGAG
AATTCTGATACAGAAAAGTGCATACTTCAAGGAGTGAGTGGTTCAGCCTGTCCAGGAGAA
ATTCTCGCGTTAATGGGACCTTCGGGTGGTGGTAAAACAACCTTACTCAAGCTTCTAAGT
GGAAAGGTGAAAAATGATTGTGGCACGATTACTTTCAATGACCAGCCATATAACAAGTCA
TTGAAACAAAGGATCGGGTTTGTGCTGCAAGATGATGTTGTTTTTCCCCATCTCACTGTG
AAAGAAACCTTAACATACGCTGCTTTGCTTCGTCTACCTAATACGTTATCTAAAGAGCAG
AAGAAAGAGAGAGCTATTGGAGTTATAAATGAGCTTGGCCTAGAAAGGTGTCAAGACACT
ATAATTGGAGGGGCATTTGTTAGAGGAGTTTCAGGAGGCGAAAGGAAACGAGTATGCATT
GGAAATGAAATTCTTCTGAATCCATCACTTTTGTTCCTAGATGAACCAACATCTGGTCTG
GATTCAACCACAGCACTTCGAATTATGCAGATGTTACGTAACACTGCCAGGGCTGGAAAG
ACAGTGGTAACAACAATACATCAGCCATCGAGTCGACTATTCAGCAGATTCGATAAGTTG
ATTCTATTAGGACAAGGCAGCTCATTGTATTTTGGCAAAGCCTCTGAGGCAATGCTGTAT
TTCTCTTCAATTGGTTGTTCTCCCCTTATAGCCATGAATCCAGCAGAGTTTCTAATTGAT
CTTGCAAATGGAAATATAACGGAAAAGTCTATACCTTCAGATCTAGAGGACAAGCTTTTA
CCAGGAAACCATCATTTCAAAATGCAAAATGAAGGACCTTCCCCAGCTGATGTTCATGAG
TATTTCGTTGGGGCTTATGAGTCGAGGGTTGCCAACATAGAGAAACTAAAACTCCTGAAG
CATGGCCTGATAGAAGAAGATTCTGAAGTGCAGAATTGGCCTAATTCAAGAGATTCTGGT
GCAACCTGGTGCCAACAGTTTACAATTCTTTTCGGAAGAAGTCTCAAGGAGCGAAACCAC
GAGTATTTCAGCTGTCTCCGGATAACTCAAGTCATAGCAACAGCTATAATTGTTGGCTTA
CTATGGTGGAATTCAGATACTTCATTCCCTAAAAGAATTTCAGATCAGGCAGGGTTGTTA
TTCTTTATTTCAGTATTTTGGGGTTTCTTTCCACTATTTACAGCAATCTTCACATTCCCA
CAAGAAAGGGCTATGTTGGTTAAAGAGAGATCAGTGAATATGTACAAGCTTAGTGCCTAT
TTCATAGCCAGAATCACCACTGATCTTCTCCTGGACCTAGTGTTGCCTGTAACATTCTTG
GTGATTGTCTATTTTATGGTTGGATTGAAGCTGACATTCAATGCATTTTCTTTAACTCTG
CTCACAATTTTACTAAGCATAATTGCTGCTCAGGGCTTAGGTTTGGCTATAGGTGCAGCA
TTCATGGATGTGAAAAAAGCAACAACTTTTGCTTCTGTTATCCTCATGACATTCATGTTG
TCTGGAGGATTCTTTGTCCAGGAAGTTCCAGCATTCATGTCATGGGTTCGTTATATCTCG
ATTAACTATCACACATACAGGCTTCTCTTAAAGATTCAGTTCAAATCCTTGAGAAATTCA
AAGTATGGCTCTGTTGATGACTCTAGTGGAGTTGAAGTAGGAGCAATGTTGGTGATGGTT
ATTGGATATAGGGTGTTAGCCTACTTCTTCCTAAGAAAAATGAAACTAAGAACAAGTACA
TAA