Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002004
CDS Infomation

pacid=37426537 polypeptide=PGSC0003DMP400001473 locus=PGSC0003DMG400000761 ID=PGSC0003DMT400002004.v4.03 annot-version=v4.03
Sequence

ATGGGGAAATTAGCTTTGCTTCATTTGCTTTGTGGAATCTTGATTTTTTGGGCTGTCTCT
GTTATAAAAGCAGAGGATCCTTATAAATACTTCACATGGACTGCCACTTATGGAATGGCT
TCTCTATTAGGTACTCCCCAGCAGGTAATCCTTATCAATGGCCAATTCCCTGGTCCTAGG
CTTGACCTTGTCACTAATGATAATATTGTCCTCAACTTGATTAATAAGTTGGATGAGCCC
CTTCTCTTGACATGGAACGGAATCAAACAGAGAAAGAACTCTTGGCAAGACGGAGTTTTG
GGAACAAATTGTCCTATTCCTCCAAACAGAAATTACATTTACAAGTTTCAACCTAAAGAT
CAGATTGGGAGCTATACTTATTTCCCTTCAACTCAACTGCACAGAGCTGCTGGAGGTTTT
GGAGTGCTTAATGTTTATGCGAGATCTGTAATCCCTGTTCCATATGCAAAACCTGCTGGA
GATTTCAGTTTGCTTATTGGTGATTGGTACAAGACTAGTCATAAGGCATTGCGGCAAATA
TTGGATTCAGGGAAGTCTCTTCCCTTCCCAGATGGTCTCCTTATAAATGGCCAAAAGCAG
TCAACTTTCACTGGCGATCAAGGCAAAACATATATGTTCAGGATTTCAAATGTGGGTTTG
AAAACTACCATTAACTTCAGAATTCAGGGCCACAAGATGAAGCTGGTAGAGGTTGAAGGA
TCGCATGTCATTCAAAATTTATACGATTCTTTTGATGTCCATGTTGGTCAATCTTTATCT
ATCCTTGTCACATTGGATCAATCTCCAAAGGACTACTACATTGTTGCATCTACAAGGTTC
ACGACAACTGTTCTTACTTCCACCTCAGTGCTCCACTACACAAACTCTCAAACACCTGTA
TCTGGACCTGTGCCAGCTGGTCCAGTTAATCAATTTCAGTGGTCGTTGATGCAAGCCAGA
ACAATCAGGTGGAATCTGACATCTAATGCAGCTAGACCAAATCCTCAGGGTTCATTCCAT
TATGGAAAAATTACACCTTCAAGGACAATTTTGCTTGCCAACTCTGCACCACTTATCAAC
GGGAAGCAGAGATATGCTGTCAATGGTATCTCTTACATTCATCCTGACACTCCTCTGAAG
CTTGCTGATCACTTTAACATCCCCGGGGTGTTCACTTTGGATTCCATTCGAAGTGCTCCC
ACTGCTGATTCTCCACACCTAGCTACAGCTGTGTTGCCATCTTCTCTCCATGAGTTCCTC
GAAATCGTTTTCCAAAACAATGAAGACACAATGCAATCTTGGCATCTTGACGGTTATGAT
TTCTGGGTCGTAGGTTTCGGATCAGGTACTTGGACACAAGCTAGTAGAAAAGGGTATAAT
CTTGTTGATGCTCTTACAAGACATACTACACAGGTTTATCCTAAATCTTGGACTGCTATA
TTTGTGTCATTGGACAACCAAGGAATGTGGAATTTGAGGTCTGCAATGTGGGATAGACAA
TATCTTGGACAACAGGCTTACCTCAGGGTATACAATCCAACATCCAGTTTAGCTAATGAA
TATGACATACCTACCAATGCTCTTCTCTGTGGCAAAGCTGATGCTCTTCGACATCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001473
PEP Infomation

pacid=37426537 transcript=PGSC0003DMT400002004 locus=PGSC0003DMG400000761 ID=PGSC0003DMT400002004.v4.03 annot-version=v4.03
Sequence

MGKLALLHLLCGILIFWAVSVIKAEDPYKYFTWTATYGMASLLGTPQQVILINGQFPGPR
LDLVTNDNIVLNLINKLDEPLLLTWNGIKQRKNSWQDGVLGTNCPIPPNRNYIYKFQPKD
QIGSYTYFPSTQLHRAAGGFGVLNVYARSVIPVPYAKPAGDFSLLIGDWYKTSHKALRQI
LDSGKSLPFPDGLLINGQKQSTFTGDQGKTYMFRISNVGLKTTINFRIQGHKMKLVEVEG
SHVIQNLYDSFDVHVGQSLSILVTLDQSPKDYYIVASTRFTTTVLTSTSVLHYTNSQTPV
SGPVPAGPVNQFQWSLMQARTIRWNLTSNAARPNPQGSFHYGKITPSRTILLANSAPLIN
GKQRYAVNGISYIHPDTPLKLADHFNIPGVFTLDSIRSAPTADSPHLATAVLPSSLHEFL
EIVFQNNEDTMQSWHLDGYDFWVVGFGSGTWTQASRKGYNLVDALTRHTTQVYPKSWTAI
FVSLDNQGMWNLRSAMWDRQYLGQQAYLRVYNPTSSLANEYDIPTNALLCGKADALRHP*

Transcript Sequence

Transcript ID

PGSC0003DMT400002004
Transcript Infomation

pacid=37426537 locus=PGSC0003DMG400000761 ID=PGSC0003DMT400002004.v4.03 annot-version=v4.03
Sequence

ATGGGGAAATTAGCTTTGCTTCATTTGCTTTGTGGAATCTTGATTTTTTGGGCTGTCTCT
GTTATAAAAGCAGAGGATCCTTATAAATACTTCACATGGACTGCCACTTATGGAATGGCT
TCTCTATTAGGTACTCCCCAGCAGGTAATCCTTATCAATGGCCAATTCCCTGGTCCTAGG
CTTGACCTTGTCACTAATGATAATATTGTCCTCAACTTGATTAATAAGTTGGATGAGCCC
CTTCTCTTGACATGGAACGGAATCAAACAGAGAAAGAACTCTTGGCAAGACGGAGTTTTG
GGAACAAATTGTCCTATTCCTCCAAACAGAAATTACATTTACAAGTTTCAACCTAAAGAT
CAGATTGGGAGCTATACTTATTTCCCTTCAACTCAACTGCACAGAGCTGCTGGAGGTTTT
GGAGTGCTTAATGTTTATGCGAGATCTGTAATCCCTGTTCCATATGCAAAACCTGCTGGA
GATTTCAGTTTGCTTATTGGTGATTGGTACAAGACTAGTCATAAGGCATTGCGGCAAATA
TTGGATTCAGGGAAGTCTCTTCCCTTCCCAGATGGTCTCCTTATAAATGGCCAAAAGCAG
TCAACTTTCACTGGCGATCAAGGCAAAACATATATGTTCAGGATTTCAAATGTGGGTTTG
AAAACTACCATTAACTTCAGAATTCAGGGCCACAAGATGAAGCTGGTAGAGGTTGAAGGA
TCGCATGTCATTCAAAATTTATACGATTCTTTTGATGTCCATGTTGGTCAATCTTTATCT
ATCCTTGTCACATTGGATCAATCTCCAAAGGACTACTACATTGTTGCATCTACAAGGTTC
ACGACAACTGTTCTTACTTCCACCTCAGTGCTCCACTACACAAACTCTCAAACACCTGTA
TCTGGACCTGTGCCAGCTGGTCCAGTTAATCAATTTCAGTGGTCGTTGATGCAAGCCAGA
ACAATCAGGTGGAATCTGACATCTAATGCAGCTAGACCAAATCCTCAGGGTTCATTCCAT
TATGGAAAAATTACACCTTCAAGGACAATTTTGCTTGCCAACTCTGCACCACTTATCAAC
GGGAAGCAGAGATATGCTGTCAATGGTATCTCTTACATTCATCCTGACACTCCTCTGAAG
CTTGCTGATCACTTTAACATCCCCGGGGTGTTCACTTTGGATTCCATTCGAAGTGCTCCC
ACTGCTGATTCTCCACACCTAGCTACAGCTGTGTTGCCATCTTCTCTCCATGAGTTCCTC
GAAATCGTTTTCCAAAACAATGAAGACACAATGCAATCTTGGCATCTTGACGGTTATGAT
TTCTGGGTCGTAGGTTTCGGATCAGGTACTTGGACACAAGCTAGTAGAAAAGGGTATAAT
CTTGTTGATGCTCTTACAAGACATACTACACAGGTTTATCCTAAATCTTGGACTGCTATA
TTTGTGTCATTGGACAACCAAGGAATGTGGAATTTGAGGTCTGCAATGTGGGATAGACAA
TATCTTGGACAACAGGCTTACCTCAGGGTATACAATCCAACATCCAGTTTAGCTAATGAA
TATGACATACCTACCAATGCTCTTCTCTGTGGCAAAGCTGATGCTCTTCGACATCCTTAA