Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001990
CDS Infomation

pacid=37425554 polypeptide=PGSC0003DMP400001461 locus=PGSC0003DMG400000754 ID=PGSC0003DMT400001990.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTTGCACATCAAAACCTTCCCCTGAACCCAATTATTCCAACAATGATCTCTAT
GCTCCCGATGGAACTGCTATCCCGGCTAAAGCTAACAATGAAGATAACTCGCTAGAGAAT
AAGAGCAAGGAGGGAGCCGAAGTGGGTAAAAAGTCGCCTTTTTTTCCTTTTTACAGTCCA
AGTCCGGCGCATTATTTTTTTTCAAAGAAGTCTCCGGCGAATTCTACTCCCCGGAGGTTT
TTTAAGCGGCCGTTTCCTCCGCCGTCTCCGGCGAAACACATACGAGCTGTGCTAGCACGG
CGGCATGGTTCTGTGAAACCCAATGCAATTCCGGAAGGAAATGAATTGGAGGGGGGTGGG
GGTCTTGATAAGAGTTTTGGGTTTTCGAAGAATTTTGGAAACAAGTATGAACTTGGAGAA
GAAGTTGGGAGAGGGCATTTTGGGTATACTTGTAAAGCTAAGTTCAAGAAAGGTGAGCTT
AAGGGACAAGAAGTTGCAGTAAAGGTCATACCCAAAGCAAAGATGTCCACGACGATAGCC
ATTGAGGACGTGAGAAGAGAGGTGAAGATATTAAGAGCTTTAACGGGACACGAAAATCTA
GTAAAATTTTATGATGCATACGAAGATCATGAAAATGTCTACATAGTGATGGAGCTATGT
GAAGGAGGCGAGCTTTTGGATAGGATACTTTTAAGAGGTGGAAAATACACAGAAGATGAT
GCAAGGGCTGTGTTGACACAAATATTAAAAGTTGTTGCATTTTGTCATCTTCAAGGTGTG
GTGCACCGGGATCTTAAACCAGAGAATTTCTTGTTTATGTCCAAGGACGAAAATGCACAA
CTTAAAGCCATAGACTTTGGGTTGTCTGATTTTGTGAAGCCAGATGAAAGGCTTAATGAT
ATTGTTGGTAGTGCATATTATGTAGCGCCAGAAGTTCTACACCGATCTTATAGTACAGAG
GCTGATGTGTGGAGTATAGGTGTTATTTCATATATCTTGCTGTGTGGCAGCCGTCCCTTT
TGGGCTCGAACTGAGTCTGGGATATTTAGGGCTGTTCTCAAAGCTGATCCAGGTTTTGAA
GAACAGCCTTGGCCTACATTATCTTCTGAAGCAAAAGACTTTGTGAAACGTCTCTTGAAT
AAGGATCCACGGAAAAGAATGACAGCAGCTCAGGCCTTGGGTCATCCTTGGATAAAGAAT
AGTCACGACGTAGAAGTGCCTTTGGATATACTGATATTCAAACTCATGAAGACTTACATG
CGTTCATCTGCTCTTCGGAAAGCTGCTCTACGGGCTTTGTCAAAGACATTGACCGTGGAT
GAGCTGGTCCATTTGAAGCAGCAGTTTGCACTGCTGGAACCAAACAAAAATGGCACCATA
AACTTGGATAACATTAAAGCGGCCCTGATGAAATATGCAACAGATGCCATGAAGGAGGCA
CGCATTCATGATTTCATTGCTTCACTTAATGCACTGCAATACAGAAGGATGGATTTTGAG
GAATTCTGTGCTGCTGCATTAAGTGTATATCAGCTTGAGGCTCTTGACCAATGGGAACAA
CATGCACGCTGTGCATATGAAATTTTTGAGAAAGATGGCAACAGAGCAATTGTCATAGAA
GAATTAGCTTCGGAACTTGGTCTTGGTCCATCTGTACCTGTTCACGCTGTTCTTCTTGAC
TGGATCAGACACACTGATGGAAAGCTTAGTTTTCTTGGTTTTGCAAAGTTGTTGCATGGT
GTGTCAAGCCGCTCAATCACAAAAATCCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400001461
PEP Infomation

pacid=37425554 transcript=PGSC0003DMT400001990 locus=PGSC0003DMG400000754 ID=PGSC0003DMT400001990.v4.03 annot-version=v4.03
Sequence

MGGCTSKPSPEPNYSNNDLYAPDGTAIPAKANNEDNSLENKSKEGAEVGKKSPFFPFYSP
SPAHYFFSKKSPANSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNAIPEGNELEGGG
GLDKSFGFSKNFGNKYELGEEVGRGHFGYTCKAKFKKGELKGQEVAVKVIPKAKMSTTIA
IEDVRREVKILRALTGHENLVKFYDAYEDHENVYIVMELCEGGELLDRILLRGGKYTEDD
ARAVLTQILKVVAFCHLQGVVHRDLKPENFLFMSKDENAQLKAIDFGLSDFVKPDERLND
IVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTESGIFRAVLKADPGFE
EQPWPTLSSEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNSHDVEVPLDILIFKLMKTYM
RSSALRKAALRALSKTLTVDELVHLKQQFALLEPNKNGTINLDNIKAALMKYATDAMKEA
RIHDFIASLNALQYRRMDFEEFCAAALSVYQLEALDQWEQHARCAYEIFEKDGNRAIVIE
ELASELGLGPSVPVHAVLLDWIRHTDGKLSFLGFAKLLHGVSSRSITKIQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400001990
Transcript Infomation

pacid=37425554 locus=PGSC0003DMG400000754 ID=PGSC0003DMT400001990.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTTGCACATCAAAACCTTCCCCTGAACCCAATTATTCCAACAATGATCTCTAT
GCTCCCGATGGAACTGCTATCCCGGCTAAAGCTAACAATGAAGATAACTCGCTAGAGAAT
AAGAGCAAGGAGGGAGCCGAAGTGGGTAAAAAGTCGCCTTTTTTTCCTTTTTACAGTCCA
AGTCCGGCGCATTATTTTTTTTCAAAGAAGTCTCCGGCGAATTCTACTCCCCGGAGGTTT
TTTAAGCGGCCGTTTCCTCCGCCGTCTCCGGCGAAACACATACGAGCTGTGCTAGCACGG
CGGCATGGTTCTGTGAAACCCAATGCAATTCCGGAAGGAAATGAATTGGAGGGGGGTGGG
GGTCTTGATAAGAGTTTTGGGTTTTCGAAGAATTTTGGAAACAAGTATGAACTTGGAGAA
GAAGTTGGGAGAGGGCATTTTGGGTATACTTGTAAAGCTAAGTTCAAGAAAGGTGAGCTT
AAGGGACAAGAAGTTGCAGTAAAGGTCATACCCAAAGCAAAGATGTCCACGACGATAGCC
ATTGAGGACGTGAGAAGAGAGGTGAAGATATTAAGAGCTTTAACGGGACACGAAAATCTA
GTAAAATTTTATGATGCATACGAAGATCATGAAAATGTCTACATAGTGATGGAGCTATGT
GAAGGAGGCGAGCTTTTGGATAGGATACTTTTAAGAGGTGGAAAATACACAGAAGATGAT
GCAAGGGCTGTGTTGACACAAATATTAAAAGTTGTTGCATTTTGTCATCTTCAAGGTGTG
GTGCACCGGGATCTTAAACCAGAGAATTTCTTGTTTATGTCCAAGGACGAAAATGCACAA
CTTAAAGCCATAGACTTTGGGTTGTCTGATTTTGTGAAGCCAGATGAAAGGCTTAATGAT
ATTGTTGGTAGTGCATATTATGTAGCGCCAGAAGTTCTACACCGATCTTATAGTACAGAG
GCTGATGTGTGGAGTATAGGTGTTATTTCATATATCTTGCTGTGTGGCAGCCGTCCCTTT
TGGGCTCGAACTGAGTCTGGGATATTTAGGGCTGTTCTCAAAGCTGATCCAGGTTTTGAA
GAACAGCCTTGGCCTACATTATCTTCTGAAGCAAAAGACTTTGTGAAACGTCTCTTGAAT
AAGGATCCACGGAAAAGAATGACAGCAGCTCAGGCCTTGGGTCATCCTTGGATAAAGAAT
AGTCACGACGTAGAAGTGCCTTTGGATATACTGATATTCAAACTCATGAAGACTTACATG
CGTTCATCTGCTCTTCGGAAAGCTGCTCTACGGGCTTTGTCAAAGACATTGACCGTGGAT
GAGCTGGTCCATTTGAAGCAGCAGTTTGCACTGCTGGAACCAAACAAAAATGGCACCATA
AACTTGGATAACATTAAAGCGGCCCTGATGAAATATGCAACAGATGCCATGAAGGAGGCA
CGCATTCATGATTTCATTGCTTCACTTAATGCACTGCAATACAGAAGGATGGATTTTGAG
GAATTCTGTGCTGCTGCATTAAGTGTATATCAGCTTGAGGCTCTTGACCAATGGGAACAA
CATGCACGCTGTGCATATGAAATTTTTGAGAAAGATGGCAACAGAGCAATTGTCATAGAA
GAATTAGCTTCGGAACTTGGTCTTGGTCCATCTGTACCTGTTCACGCTGTTCTTCTTGAC
TGGATCAGACACACTGATGGAAAGCTTAGTTTTCTTGGTTTTGCAAAGTTGTTGCATGGT
GTGTCAAGCCGCTCAATCACAAAAATCCAATGA