Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001981
CDS Infomation

pacid=37424898 polypeptide=PGSC0003DMP400001454 locus=PGSC0003DMG400000752 ID=PGSC0003DMT400001981.v4.03 annot-version=v4.03
Sequence

ATGCATTGGTGGCCGAGCTTCTCATCTTCCACCCGTGCCTCTACCTCCGACAGAAAGGTT
CATTCCGATGATAGCGTGATCGTCACGCGCGGTGGCGCTGGTTCCGTCCTGAAATCAGCT
CTCTTCGGCACCCGTAGCCGTATACGCCAAATATCCCGTAAGAAGAAGAAGCCCCAACAC
CGTGGTGGGGACCACAATGTCGACGTCGGAGATGACTGGCATTCTCAGTATTCGTATGAA
AGTTCTCCACCGGAGGGACGTCCGCCACCGCAACCCCTTCCTTTGCCGGAATTACACGTG
ATGCTCCGTCAACATCCTAATTTGGTTCAAGCCCCCAGCGTCCCACTTCCTTCGCCTAGA
GAAGGAATTTCGCATCATAAAGCTGGAGAGGAAACAGAAAGAGAAAGAAATGATGCTTTC
AATGGCGGAGCAACACGAGAGGGACTATTAAACCAAGATGCTCGAAAGAGAACAGAGCAC
TCAGCAACTCCATTGTCCAGGAAGATGCCACCTCGGATGCTGCTTGTCCCAGAAAGAATC
CCTCCTGACTTTTGGACTAGTGCTCCAACTAGTCCTTATGCAAGTCCTTCACATAGCCAA
CTGAAAAGTGGTGATCATACAACGAGTCCTCTTTTCGTCACACCTCCTAGTGTTTTTCAA
GTTTGGTCTGCCCCTGAGATGCCTCCTTCAGATGCCCCTCATGGTTTAGGCTTCTCTTAT
AACCATGCTTTTAGTGTTGATAACTCTCCTCTTCACAGTCCAAAATTAAGTCCTCAGAGA
AGATCCAGGAGTCCAAGTGGACCTACTTCACCTTTACATCATCCACTACCAAATGATCAG
TGCCCAATGGTGCGTCGTGAGAATTGCGCTCAAGGCAATGTCCATCCTTTACCCCTTCCT
CCTCTAGCTACCCCTCCCGTTTCACCACCTACCCCTAAAGCAGATATATCACCTATTAAA
GGACAGTGGAAAAAAGGAAAGCTTATTGGACGTGGGACATTTGGAAGTGTTTACGTAGCA
TCAAACAGAGAGACAGGAGCTTTATGTGCATTGAAAGAAGTTGAATTATTACCAGATGAC
CCAAAATCTGCTGAGTCTATAAGGCAGCTAGAACAGGAAATCAACGTTCTCAGCCAGCTC
AAGCACCCAAACATTGTCCAGTATTATGGCAGTGAAATAGTTGATGACCGGTTTTACATT
TATCTAGAATATGTTCATCCTGGTTCTATCAATAAATTTATCCAAGACCATTGTGGGGAA
ATTACAGAATCTATTGTGAGGAATTTCACTCGCCATATTCTTTGCGGGTTAGCTTACTTG
CACAGTAAAAAGACCATTCACAGGGACATTAAAGGGGCAAATTTGCTTGTTGATGCATAT
GGGGTTGTCAAGCTTGCAGACTTTGGGATGGCTAAGCATCTAAACGGGCACTCAGCTAAT
CTCTCTTTAAAAGGAAGTCCGTATTGGATGGCTCCTGAGCTTTTGCACTCTGTTATGCAG
AGAGATAATAGTAGCGATCTTGCCTTAGCTATTGATATATGGAGTTTGGGTTGTACTATA
ATTGAGATGCTGAATGGCAAACCTCCTTGGAGTGAATATGAAGCTGCTGCAGCAATGTTC
AAGGTTCTAAAAGATACCCCACCAATACCTGAAACATTATCACTAGAAGGGAAAGATTTT
TTGCATTGTTGTTTCCGTAGAAATCCAGCAGAGAGGCCATCAGCTAGCATGTTGCTAGAA
CATCCATTTGTTAGAATGTCGCATCAGCCAGAAGTTCCTTCTTTTGTCCAGCAACTTGAC
GGGATAAGACTAACAGAAAAGTTGCATTCTCAAAGAGAGCAGCTAAGTTATAAACTTGAT
GCGGTGCATGTATCATTAGAAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400001454
PEP Infomation

pacid=37424898 transcript=PGSC0003DMT400001981 locus=PGSC0003DMG400000752 ID=PGSC0003DMT400001981.v4.03 annot-version=v4.03
Sequence

MHWWPSFSSSTRASTSDRKVHSDDSVIVTRGGAGSVLKSALFGTRSRIRQISRKKKKPQH
RGGDHNVDVGDDWHSQYSYESSPPEGRPPPQPLPLPELHVMLRQHPNLVQAPSVPLPSPR
EGISHHKAGEETERERNDAFNGGATREGLLNQDARKRTEHSATPLSRKMPPRMLLVPERI
PPDFWTSAPTSPYASPSHSQLKSGDHTTSPLFVTPPSVFQVWSAPEMPPSDAPHGLGFSY
NHAFSVDNSPLHSPKLSPQRRSRSPSGPTSPLHHPLPNDQCPMVRRENCAQGNVHPLPLP
PLATPPVSPPTPKADISPIKGQWKKGKLIGRGTFGSVYVASNRETGALCALKEVELLPDD
PKSAESIRQLEQEINVLSQLKHPNIVQYYGSEIVDDRFYIYLEYVHPGSINKFIQDHCGE
ITESIVRNFTRHILCGLAYLHSKKTIHRDIKGANLLVDAYGVVKLADFGMAKHLNGHSAN
LSLKGSPYWMAPELLHSVMQRDNSSDLALAIDIWSLGCTIIEMLNGKPPWSEYEAAAAMF
KVLKDTPPIPETLSLEGKDFLHCCFRRNPAERPSASMLLEHPFVRMSHQPEVPSFVQQLD
GIRLTEKLHSQREQLSYKLDAVHVSLER*

Transcript Sequence

Transcript ID

PGSC0003DMT400001981
Transcript Infomation

pacid=37424898 locus=PGSC0003DMG400000752 ID=PGSC0003DMT400001981.v4.03 annot-version=v4.03
Sequence

ATGCATTGGTGGCCGAGCTTCTCATCTTCCACCCGTGCCTCTACCTCCGACAGAAAGGTT
CATTCCGATGATAGCGTGATCGTCACGCGCGGTGGCGCTGGTTCCGTCCTGAAATCAGCT
CTCTTCGGCACCCGTAGCCGTATACGCCAAATATCCCGTAAGAAGAAGAAGCCCCAACAC
CGTGGTGGGGACCACAATGTCGACGTCGGAGATGACTGGCATTCTCAGTATTCGTATGAA
AGTTCTCCACCGGAGGGACGTCCGCCACCGCAACCCCTTCCTTTGCCGGAATTACACGTG
ATGCTCCGTCAACATCCTAATTTGGTTCAAGCCCCCAGCGTCCCACTTCCTTCGCCTAGA
GAAGGAATTTCGCATCATAAAGCTGGAGAGGAAACAGAAAGAGAAAGAAATGATGCTTTC
AATGGCGGAGCAACACGAGAGGGACTATTAAACCAAGATGCTCGAAAGAGAACAGAGCAC
TCAGCAACTCCATTGTCCAGGAAGATGCCACCTCGGATGCTGCTTGTCCCAGAAAGAATC
CCTCCTGACTTTTGGACTAGTGCTCCAACTAGTCCTTATGCAAGTCCTTCACATAGCCAA
CTGAAAAGTGGTGATCATACAACGAGTCCTCTTTTCGTCACACCTCCTAGTGTTTTTCAA
GTTTGGTCTGCCCCTGAGATGCCTCCTTCAGATGCCCCTCATGGTTTAGGCTTCTCTTAT
AACCATGCTTTTAGTGTTGATAACTCTCCTCTTCACAGTCCAAAATTAAGTCCTCAGAGA
AGATCCAGGAGTCCAAGTGGACCTACTTCACCTTTACATCATCCACTACCAAATGATCAG
TGCCCAATGGTGCGTCGTGAGAATTGCGCTCAAGGCAATGTCCATCCTTTACCCCTTCCT
CCTCTAGCTACCCCTCCCGTTTCACCACCTACCCCTAAAGCAGATATATCACCTATTAAA
GGACAGTGGAAAAAAGGAAAGCTTATTGGACGTGGGACATTTGGAAGTGTTTACGTAGCA
TCAAACAGAGAGACAGGAGCTTTATGTGCATTGAAAGAAGTTGAATTATTACCAGATGAC
CCAAAATCTGCTGAGTCTATAAGGCAGCTAGAACAGGAAATCAACGTTCTCAGCCAGCTC
AAGCACCCAAACATTGTCCAGTATTATGGCAGTGAAATAGTTGATGACCGGTTTTACATT
TATCTAGAATATGTTCATCCTGGTTCTATCAATAAATTTATCCAAGACCATTGTGGGGAA
ATTACAGAATCTATTGTGAGGAATTTCACTCGCCATATTCTTTGCGGGTTAGCTTACTTG
CACAGTAAAAAGACCATTCACAGGGACATTAAAGGGGCAAATTTGCTTGTTGATGCATAT
GGGGTTGTCAAGCTTGCAGACTTTGGGATGGCTAAGCATCTAAACGGGCACTCAGCTAAT
CTCTCTTTAAAAGGAAGTCCGTATTGGATGGCTCCTGAGCTTTTGCACTCTGTTATGCAG
AGAGATAATAGTAGCGATCTTGCCTTAGCTATTGATATATGGAGTTTGGGTTGTACTATA
ATTGAGATGCTGAATGGCAAACCTCCTTGGAGTGAATATGAAGCTGCTGCAGCAATGTTC
AAGGTTCTAAAAGATACCCCACCAATACCTGAAACATTATCACTAGAAGGGAAAGATTTT
TTGCATTGTTGTTTCCGTAGAAATCCAGCAGAGAGGCCATCAGCTAGCATGTTGCTAGAA
CATCCATTTGTTAGAATGTCGCATCAGCCAGAAGTTCCTTCTTTTGTCCAGCAACTTGAC
GGGATAAGACTAACAGAAAAGTTGCATTCTCAAAGAGAGCAGCTAAGTTATAAACTTGAT
GCGGTGCATGTATCATTAGAAAGATAG