Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001960
CDS Infomation

pacid=37426308 polypeptide=PGSC0003DMP400001445 locus=PGSC0003DMG400000745 ID=PGSC0003DMT400001960.v4.03 annot-version=v4.03
Sequence

ATGGACTATATGAACATTTGTCTAGGATTCTTCTTCATCTGTTTTTTGGTGCGTGGAGTA
TTGATTTTTTCACTTAGAAGAAGCAAAAGAGTTGCACCAGGTCCATTCCCTTTGCCTATC
ATCGGTAATCTTCACTTGCTTGGTCATAAACCCCACATATCACTTGCTCAACTCGCAAAA
AAACATGGTCCAATTATGAATCTGAAATTGGGGCAAATAAACACAGTCGTCATTTCCTCA
TCCGCCTTGGCAAAACAAGTCTTGCAAAAGCAAGATTTAGCCTTTTCCAATAGATTTGTT
CCAGACGCCCTTCGTGCCTGCAATCACTCTGGTTTATCTGTTGTATGGCTATCTGTCAAC
AACTCACAGTGGAGAACGCTTCGCAAGGTTATGAACTCTCACATCTTCTCAGGTAACAAG
CTTGACGCTAATGAGCATGTCAGAACAAAAAAGATTCAGGACCTGATTAATTACTGTCAC
AACTGTAGCAAAGTTGGTGAAGCAGTAGATATGGGCAGAGCATCTTTCAGGACTTCACTG
AATTTGATTTCCAACACCATTTTCTCTAAAGATTTGACTGATCCATTTTCCGATTCTGCT
AAGGAATTTAAGGAATTGGTGTGGAACATCATGGTTGAGGTTGGTAAACCCAATTTGGTG
GACTATTTCCCCTTACTTAAGAGGATTGATCCACAAGGTATAAGGCGGCGCTTGACTGAA
TATTTTAGTAAGGTTCTTCACCTTATTAGTGGTTTGATCGATGAGCGGATAAAGGAAAGG
AAAATGGGAAATCGGGCAAATGTTGATGTGTTGGATGCCCTTCTCAACATTAGCCCTGAT
GAAATCGACAGGAATCATATCGAGCATCTGTGTCTGGAAATGTTTGCAGCAGGGACCGAT
ACAATATCAAATACATTGGAGTGGGCAATGGCTGAACTACTCAAGAATCAACATACATTG
GAGAAAGCACAAAAAGAACTTGAACAAATAATTGGCAGAGGCAAACTAATAGATGAAGCT
GATGTTGCAAAATTACCTTACTTGAGGTGCATCGTCAAAGAAACCTTTCGCATACACCCA
CAAGTTCCTTTCTTAATTCAGCGCAAAACAGAGGAAGATGTTGATTTTTGTGGCTATACT
ATTCCAAAAGACTCCCAGGTTCTTGTGAACGTATGGGCAATAGGGCGCGACTCTAGTCTA
TGGGAAGACCCTTTGGACTTTAAGCCGGAGAGGTTTTGGGAGTCAGAAATAGACTTTAGA
GGTCGGGATTTTGAGCTGATTCCATTTGGTGCTGGTAGAAGAATTTGCCCTGGATTGCCT
TTGGCTATCAGGATGGTTCCAGTAGCACTAGGTTCATTGCTAAATACATTTAATTGGAAG
CTACATGGTGGAATTGCACCTAAAGATTTGGACATGGAGGAGAGTTTTGGTATTACCTTG
GCAAAAACTCAACCTCTGCTAGCTATCCCTATTCCGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001445
PEP Infomation

pacid=37426308 transcript=PGSC0003DMT400001960 locus=PGSC0003DMG400000745 ID=PGSC0003DMT400001960.v4.03 annot-version=v4.03
Sequence

MDYMNICLGFFFICFLVRGVLIFSLRRSKRVAPGPFPLPIIGNLHLLGHKPHISLAQLAK
KHGPIMNLKLGQINTVVISSSALAKQVLQKQDLAFSNRFVPDALRACNHSGLSVVWLSVN
NSQWRTLRKVMNSHIFSGNKLDANEHVRTKKIQDLINYCHNCSKVGEAVDMGRASFRTSL
NLISNTIFSKDLTDPFSDSAKEFKELVWNIMVEVGKPNLVDYFPLLKRIDPQGIRRRLTE
YFSKVLHLISGLIDERIKERKMGNRANVDVLDALLNISPDEIDRNHIEHLCLEMFAAGTD
TISNTLEWAMAELLKNQHTLEKAQKELEQIIGRGKLIDEADVAKLPYLRCIVKETFRIHP
QVPFLIQRKTEEDVDFCGYTIPKDSQVLVNVWAIGRDSSLWEDPLDFKPERFWESEIDFR
GRDFELIPFGAGRRICPGLPLAIRMVPVALGSLLNTFNWKLHGGIAPKDLDMEESFGITL
AKTQPLLAIPIPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400001960
Transcript Infomation

pacid=37426308 locus=PGSC0003DMG400000745 ID=PGSC0003DMT400001960.v4.03 annot-version=v4.03
Sequence

ATGGACTATATGAACATTTGTCTAGGATTCTTCTTCATCTGTTTTTTGGTGCGTGGAGTA
TTGATTTTTTCACTTAGAAGAAGCAAAAGAGTTGCACCAGGTCCATTCCCTTTGCCTATC
ATCGGTAATCTTCACTTGCTTGGTCATAAACCCCACATATCACTTGCTCAACTCGCAAAA
AAACATGGTCCAATTATGAATCTGAAATTGGGGCAAATAAACACAGTCGTCATTTCCTCA
TCCGCCTTGGCAAAACAAGTCTTGCAAAAGCAAGATTTAGCCTTTTCCAATAGATTTGTT
CCAGACGCCCTTCGTGCCTGCAATCACTCTGGTTTATCTGTTGTATGGCTATCTGTCAAC
AACTCACAGTGGAGAACGCTTCGCAAGGTTATGAACTCTCACATCTTCTCAGGTAACAAG
CTTGACGCTAATGAGCATGTCAGAACAAAAAAGATTCAGGACCTGATTAATTACTGTCAC
AACTGTAGCAAAGTTGGTGAAGCAGTAGATATGGGCAGAGCATCTTTCAGGACTTCACTG
AATTTGATTTCCAACACCATTTTCTCTAAAGATTTGACTGATCCATTTTCCGATTCTGCT
AAGGAATTTAAGGAATTGGTGTGGAACATCATGGTTGAGGTTGGTAAACCCAATTTGGTG
GACTATTTCCCCTTACTTAAGAGGATTGATCCACAAGGTATAAGGCGGCGCTTGACTGAA
TATTTTAGTAAGGTTCTTCACCTTATTAGTGGTTTGATCGATGAGCGGATAAAGGAAAGG
AAAATGGGAAATCGGGCAAATGTTGATGTGTTGGATGCCCTTCTCAACATTAGCCCTGAT
GAAATCGACAGGAATCATATCGAGCATCTGTGTCTGGAAATGTTTGCAGCAGGGACCGAT
ACAATATCAAATACATTGGAGTGGGCAATGGCTGAACTACTCAAGAATCAACATACATTG
GAGAAAGCACAAAAAGAACTTGAACAAATAATTGGCAGAGGCAAACTAATAGATGAAGCT
GATGTTGCAAAATTACCTTACTTGAGGTGCATCGTCAAAGAAACCTTTCGCATACACCCA
CAAGTTCCTTTCTTAATTCAGCGCAAAACAGAGGAAGATGTTGATTTTTGTGGCTATACT
ATTCCAAAAGACTCCCAGGTTCTTGTGAACGTATGGGCAATAGGGCGCGACTCTAGTCTA
TGGGAAGACCCTTTGGACTTTAAGCCGGAGAGGTTTTGGGAGTCAGAAATAGACTTTAGA
GGTCGGGATTTTGAGCTGATTCCATTTGGTGCTGGTAGAAGAATTTGCCCTGGATTGCCT
TTGGCTATCAGGATGGTTCCAGTAGCACTAGGTTCATTGCTAAATACATTTAATTGGAAG
CTACATGGTGGAATTGCACCTAAAGATTTGGACATGGAGGAGAGTTTTGGTATTACCTTG
GCAAAAACTCAACCTCTGCTAGCTATCCCTATTCCGGTGTAA