Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001942
CDS Infomation

pacid=37438401 polypeptide=PGSC0003DMP400001436 locus=PGSC0003DMG400000738 ID=PGSC0003DMT400001942.v4.03 annot-version=v4.03
Sequence

ATGTCGGGTCCATTAGATCGGTTTGCTAGACCTTGCTTTGAGGGGTCATCTACACATGAT
GAGAGAAGAGAAAGAAAGTCTGATTTTGAGAATTCAGAGGATGAGAGGAGGACGAGAATT
GGTTCCCTGAAAAAGAAAGCATTGAATGCGTCAACGAAATTCAAACATTCTCTTAAGAAG
AAAAGTAGTAGAAGAAAAAGCAATGTACGGTTGAGCTCACTTTCCATAGAGGATATTCGG
GATGCTGAGGAGCTACAGGCTGTTGATCAGTTTAGGCAATCATTACTTTTGGATGAGTTG
TTACCTGAAAGACACGATGACTACTATATGATGTTGAGGTTCTTAAAAGCAAGAAAGTTT
GATATTGAGAAAGCCAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGATTTTGGA
ACTGACACAATCACGCAGGATTTTGAATTCCCGGAGTTGGAAGAAGTGGTAAAATATTAT
CCCCAAGGTTATCATGGGATTGATAAGGAGGGAAGGCCAGTATACATTGAAAGATTAGGG
AAAGTTGATCCTAACAAACTCATGCAAGTCACAACCATGGATCGTTATATAAAATACCAC
GTAAGGGAGTTCGAGAAAACTTTTTTGATTAAGTTTCCAGCTTGTACAATAGCTGCAAAA
AGGCAGATCGATTGTAGCACTACTATTTTGGACGTTCAGGGAGTGGGTTTGAAAAACTTT
AGCAAGAGTGCAAGGGAGCTCATTTTGCGGCTCCAGAAGATTGATGGTGATAATTATCCT
GAGACGCTTCATCAGATGTTCATAATCAATGCTGGGGCTGGGTTTAGGCTCCTGTGGAAT
ACTGTTAAGAGTTTTCTGGACCCCAAGACGGCCTCCAAGATACATGTTCTTGGGAACAAG
TATCAGAATAAATTGCTTGAAATAGTTGATGCTAGTGAGTTGCCAGATTTCATAGGTGGT
AACTGTACATGTGCAGATCGAGGAGGTTGCATGCGTTCAGATAAAGGACCATGGCAAAAT
CCAGATATATTGAAGATGATTGGTGAAGCACGACGTGCCAAGCAGCTTGTTAAAGTTCTA
AATAGTGAAGGGAAGATAGTTTATGCTAAGCCTCGCTACCCAACGGTGAAAGGTAGTAGT
GACACCTCTACTGCTGAATCTGGATCTGAAGCTGAAGATATTGCTTCCCCAAAAGCTGTA
AGGAGTTATTCACATCTCCGGCTTACTCCTGTACGAGAAGAGGCTAAGGCTATTGGAATG
CCTGGCTACACCTCAAACTTCCCAGGATATGATGAATATGTTCCTATGGTTGACAAGGCT
GTTGATTCTGCATGGAAGAAGGAACCATCCCTTCAAAGACCCTCCACCCCCAAAGCGATG
CTTCCACCAGCAGGCTCTGAAAAGCCTGTAGAAGGTCTTCATACTCGAGTTTTAGGACTT
CTTATGGCCTTCTTCATGACTGTTGTGGTGCTTTTCCGCTCAGTTACATGCCGTGTTACC
AAGAAACTTCAAGATGCATCGACTGTTGAGAACCAAGATGTTCAAGACTTTACTTTTGAT
GCCAGCCCTAAAGAGGAGTTTCGACCCCCTTCACCTACTCCAGCCTTTACAGAAGCTCAA
CTGCTCTCCGTTGTTCTCAAGAGACTGGGTGAACTTGAAGACAAAGTAAATACTCTTCAA
GAAAAGCCATCTGAGATGCCTTATGAAAAAGCGGAACTGCTAAATGCAGCTGTTTGCCGG
GTGGATGGCCTAGAAGCTGAGTTAATAGCAACCAAGAAGGCATTACATGAGGCATTGATG
AGGCAAGAAGAACTTCTCGCTTACATTGATGGTCAAGAAGCTGCCAAGTTCCAGAAAAAG
AAGAAGTTTTGCTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001436
PEP Infomation

pacid=37438401 transcript=PGSC0003DMT400001942 locus=PGSC0003DMG400000738 ID=PGSC0003DMT400001942.v4.03 annot-version=v4.03
Sequence

MSGPLDRFARPCFEGSSTHDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKK
KSSRRKSNVRLSSLSIEDIRDAEELQAVDQFRQSLLLDELLPERHDDYYMMLRFLKARKF
DIEKAKHMWADMLQWRKDFGTDTITQDFEFPELEEVVKYYPQGYHGIDKEGRPVYIERLG
KVDPNKLMQVTTMDRYIKYHVREFEKTFLIKFPACTIAAKRQIDCSTTILDVQGVGLKNF
SKSARELILRLQKIDGDNYPETLHQMFIINAGAGFRLLWNTVKSFLDPKTASKIHVLGNK
YQNKLLEIVDASELPDFIGGNCTCADRGGCMRSDKGPWQNPDILKMIGEARRAKQLVKVL
NSEGKIVYAKPRYPTVKGSSDTSTAESGSEAEDIASPKAVRSYSHLRLTPVREEAKAIGM
PGYTSNFPGYDEYVPMVDKAVDSAWKKEPSLQRPSTPKAMLPPAGSEKPVEGLHTRVLGL
LMAFFMTVVVLFRSVTCRVTKKLQDASTVENQDVQDFTFDASPKEEFRPPSPTPAFTEAQ
LLSVVLKRLGELEDKVNTLQEKPSEMPYEKAELLNAAVCRVDGLEAELIATKKALHEALM
RQEELLAYIDGQEAAKFQKKKKFCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400001942
Transcript Infomation

pacid=37438401 locus=PGSC0003DMG400000738 ID=PGSC0003DMT400001942.v4.03 annot-version=v4.03
Sequence

ATGTCGGGTCCATTAGATCGGTTTGCTAGACCTTGCTTTGAGGGGTCATCTACACATGAT
GAGAGAAGAGAAAGAAAGTCTGATTTTGAGAATTCAGAGGATGAGAGGAGGACGAGAATT
GGTTCCCTGAAAAAGAAAGCATTGAATGCGTCAACGAAATTCAAACATTCTCTTAAGAAG
AAAAGTAGTAGAAGAAAAAGCAATGTACGGTTGAGCTCACTTTCCATAGAGGATATTCGG
GATGCTGAGGAGCTACAGGCTGTTGATCAGTTTAGGCAATCATTACTTTTGGATGAGTTG
TTACCTGAAAGACACGATGACTACTATATGATGTTGAGGTTCTTAAAAGCAAGAAAGTTT
GATATTGAGAAAGCCAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGATTTTGGA
ACTGACACAATCACGCAGGATTTTGAATTCCCGGAGTTGGAAGAAGTGGTAAAATATTAT
CCCCAAGGTTATCATGGGATTGATAAGGAGGGAAGGCCAGTATACATTGAAAGATTAGGG
AAAGTTGATCCTAACAAACTCATGCAAGTCACAACCATGGATCGTTATATAAAATACCAC
GTAAGGGAGTTCGAGAAAACTTTTTTGATTAAGTTTCCAGCTTGTACAATAGCTGCAAAA
AGGCAGATCGATTGTAGCACTACTATTTTGGACGTTCAGGGAGTGGGTTTGAAAAACTTT
AGCAAGAGTGCAAGGGAGCTCATTTTGCGGCTCCAGAAGATTGATGGTGATAATTATCCT
GAGACGCTTCATCAGATGTTCATAATCAATGCTGGGGCTGGGTTTAGGCTCCTGTGGAAT
ACTGTTAAGAGTTTTCTGGACCCCAAGACGGCCTCCAAGATACATGTTCTTGGGAACAAG
TATCAGAATAAATTGCTTGAAATAGTTGATGCTAGTGAGTTGCCAGATTTCATAGGTGGT
AACTGTACATGTGCAGATCGAGGAGGTTGCATGCGTTCAGATAAAGGACCATGGCAAAAT
CCAGATATATTGAAGATGATTGGTGAAGCACGACGTGCCAAGCAGCTTGTTAAAGTTCTA
AATAGTGAAGGGAAGATAGTTTATGCTAAGCCTCGCTACCCAACGGTGAAAGGTAGTAGT
GACACCTCTACTGCTGAATCTGGATCTGAAGCTGAAGATATTGCTTCCCCAAAAGCTGTA
AGGAGTTATTCACATCTCCGGCTTACTCCTGTACGAGAAGAGGCTAAGGCTATTGGAATG
CCTGGCTACACCTCAAACTTCCCAGGATATGATGAATATGTTCCTATGGTTGACAAGGCT
GTTGATTCTGCATGGAAGAAGGAACCATCCCTTCAAAGACCCTCCACCCCCAAAGCGATG
CTTCCACCAGCAGGCTCTGAAAAGCCTGTAGAAGGTCTTCATACTCGAGTTTTAGGACTT
CTTATGGCCTTCTTCATGACTGTTGTGGTGCTTTTCCGCTCAGTTACATGCCGTGTTACC
AAGAAACTTCAAGATGCATCGACTGTTGAGAACCAAGATGTTCAAGACTTTACTTTTGAT
GCCAGCCCTAAAGAGGAGTTTCGACCCCCTTCACCTACTCCAGCCTTTACAGAAGCTCAA
CTGCTCTCCGTTGTTCTCAAGAGACTGGGTGAACTTGAAGACAAAGTAAATACTCTTCAA
GAAAAGCCATCTGAGATGCCTTATGAAAAAGCGGAACTGCTAAATGCAGCTGTTTGCCGG
GTGGATGGCCTAGAAGCTGAGTTAATAGCAACCAAGAAGGCATTACATGAGGCATTGATG
AGGCAAGAAGAACTTCTCGCTTACATTGATGGTCAAGAAGCTGCCAAGTTCCAGAAAAAG
AAGAAGTTTTGCTTTTAA