Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001939
CDS Infomation

pacid=37441297 polypeptide=PGSC0003DMP400001433 locus=PGSC0003DMG400000737 ID=PGSC0003DMT400001939.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTACACACCTTGTCTCACACTCTTCATCACTTCACAAGTCCCTCAAATACCCA
TCAAATGCATCACAAAAACTTTATTTTTTCAAACCCAATTTTCCGTTGAAGCCCATTTCA
AGAAATCTTAGCATAAGGGCATCTGTATCAACTTCTGAGCCCCAAACTCAGAAATTTCAG
CATTGTTTCAAGAAATCTGAAGATGGGTTTTTGTATTGTGAGGGTGTTAAGGTTGAAGAT
GTTATGGAGACCGTGGAAAGACGACCCTTTTATTTATATAGTAAGCCCCAAATTACTAGG
AATGTTGAGGCTTATAAGGCGGCTTTAGAAGGTTTGAATTCGATTATTGGTTATGCTATT
AAGGCCAATAATAATCTCAAGATTTTGGAACATTTGAGGGGCCTTGGCTGTGGAGCTGTT
TTGGTTAGTGGGAATGAACTCAAATTGGCACTTACTGCTGGATTTGATCCTACCAAGTGT
ATTTTTAATGGAAATGGAAAGCTGTTAGAGGACTTAGTGCTAGCTGCCCAAGCAGGTGTG
TTTGTAAACATCGACAGCGAATTTGACTTGGATAACATTGTAGCAGCTGCAAGGCTGGCT
GGGAAGAAAGTTAACGTGCTACTCAGGATTAATCCAGATGTGGATCCCCAGGTTCATCCT
TATGTTGCCACCGGCAATAAGAGCTCCAAATTTGGCATCAGAAATGAGAAGCTGCAATGG
TTTCTAGATGCTGTCAAGGCACATCCTCAGGAATTGAAACTTGTTGGAGCTCATTGTCAT
CTTGGGTCAACTATCACCAAGGTAGACATTTTTCGAGATGCAGCTGTCTTGATGGTGAAC
TACATTGACGAAATCCGATCTCAAGGATTTGAAATTGATTACCTGAATATTGGAGGTGGT
TTAGGGATTGATTACTATCATGCTGGAGCTATCCTTCCTTCACCTAGAGATCTTATTAAT
ACGGTACGAGAATTGGTCCTTTCTCGAAACCTCAATCTCATTATTGAACCTGGAAGATCA
CTAATTGCAAACACATGCTGCTTGGTTAACAGAGTTACCGGAGTTAAAACCAATGGGACC
AAAAACTTTATTGTGATTGATGGTAGTATGGCTGAGCTTATACGTCCAAGTCTTTATGAT
GCTTATCAGCACATAGAGCTTGTTTCCCCTCCACCTCCGGAAGCTGCAATTGCGAAGTTT
GATGTTGTTGGTCCTGTATGTGAATCGGCTGATTTCCTGGGGAAGGACCGTGAACTTCCC
GCCCCTACTAGGGGCACTGGTTTGGTAGTTCACGATGCAGGTGCTTACTGCATGAGTATG
GCATCAACTTACAATCTTAAGATGCGCCCACCAGAGTATTGGGTGGAAGAAGATGGATCA
CTGTCCAAAATCCGTCATGGGGAGACATTCGAAGACCATTTAAGATTCTTTGATGGTCTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400001433
PEP Infomation

pacid=37441297 transcript=PGSC0003DMT400001939 locus=PGSC0003DMG400000737 ID=PGSC0003DMT400001939.v4.03 annot-version=v4.03
Sequence

MAATHLVSHSSSLHKSLKYPSNASQKLYFFKPNFPLKPISRNLSIRASVSTSEPQTQKFQ
HCFKKSEDGFLYCEGVKVEDVMETVERRPFYLYSKPQITRNVEAYKAALEGLNSIIGYAI
KANNNLKILEHLRGLGCGAVLVSGNELKLALTAGFDPTKCIFNGNGKLLEDLVLAAQAGV
FVNIDSEFDLDNIVAAARLAGKKVNVLLRINPDVDPQVHPYVATGNKSSKFGIRNEKLQW
FLDAVKAHPQELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRSQGFEIDYLNIGGG
LGIDYYHAGAILPSPRDLINTVRELVLSRNLNLIIEPGRSLIANTCCLVNRVTGVKTNGT
KNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPEAAIAKFDVVGPVCESADFLGKDRELP
APTRGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSLSKIRHGETFEDHLRFFDGL
*

Transcript Sequence

Transcript ID

PGSC0003DMT400001939
Transcript Infomation

pacid=37441297 locus=PGSC0003DMG400000737 ID=PGSC0003DMT400001939.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTACACACCTTGTCTCACACTCTTCATCACTTCACAAGTCCCTCAAATACCCA
TCAAATGCATCACAAAAACTTTATTTTTTCAAACCCAATTTTCCGTTGAAGCCCATTTCA
AGAAATCTTAGCATAAGGGCATCTGTATCAACTTCTGAGCCCCAAACTCAGAAATTTCAG
CATTGTTTCAAGAAATCTGAAGATGGGTTTTTGTATTGTGAGGGTGTTAAGGTTGAAGAT
GTTATGGAGACCGTGGAAAGACGACCCTTTTATTTATATAGTAAGCCCCAAATTACTAGG
AATGTTGAGGCTTATAAGGCGGCTTTAGAAGGTTTGAATTCGATTATTGGTTATGCTATT
AAGGCCAATAATAATCTCAAGATTTTGGAACATTTGAGGGGCCTTGGCTGTGGAGCTGTT
TTGGTTAGTGGGAATGAACTCAAATTGGCACTTACTGCTGGATTTGATCCTACCAAGTGT
ATTTTTAATGGAAATGGAAAGCTGTTAGAGGACTTAGTGCTAGCTGCCCAAGCAGGTGTG
TTTGTAAACATCGACAGCGAATTTGACTTGGATAACATTGTAGCAGCTGCAAGGCTGGCT
GGGAAGAAAGTTAACGTGCTACTCAGGATTAATCCAGATGTGGATCCCCAGGTTCATCCT
TATGTTGCCACCGGCAATAAGAGCTCCAAATTTGGCATCAGAAATGAGAAGCTGCAATGG
TTTCTAGATGCTGTCAAGGCACATCCTCAGGAATTGAAACTTGTTGGAGCTCATTGTCAT
CTTGGGTCAACTATCACCAAGGTAGACATTTTTCGAGATGCAGCTGTCTTGATGGTGAAC
TACATTGACGAAATCCGATCTCAAGGATTTGAAATTGATTACCTGAATATTGGAGGTGGT
TTAGGGATTGATTACTATCATGCTGGAGCTATCCTTCCTTCACCTAGAGATCTTATTAAT
ACGGTACGAGAATTGGTCCTTTCTCGAAACCTCAATCTCATTATTGAACCTGGAAGATCA
CTAATTGCAAACACATGCTGCTTGGTTAACAGAGTTACCGGAGTTAAAACCAATGGGACC
AAAAACTTTATTGTGATTGATGGTAGTATGGCTGAGCTTATACGTCCAAGTCTTTATGAT
GCTTATCAGCACATAGAGCTTGTTTCCCCTCCACCTCCGGAAGCTGCAATTGCGAAGTTT
GATGTTGTTGGTCCTGTATGTGAATCGGCTGATTTCCTGGGGAAGGACCGTGAACTTCCC
GCCCCTACTAGGGGCACTGGTTTGGTAGTTCACGATGCAGGTGCTTACTGCATGAGTATG
GCATCAACTTACAATCTTAAGATGCGCCCACCAGAGTATTGGGTGGAAGAAGATGGATCA
CTGTCCAAAATCCGTCATGGGGAGACATTCGAAGACCATTTAAGATTCTTTGATGGTCTG
TAA