Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001856
CDS Infomation

pacid=37434012 polypeptide=PGSC0003DMP400001369 locus=PGSC0003DMG400000695 ID=PGSC0003DMT400001856.v4.03 annot-version=v4.03
Sequence

ATGATTAAGCAGATTTTGGGGAAGCTTCCTAGGAAGCCGTCAAAATCATCATCATCTCCT
AACGACTCAAGTCAAAATGAAGTTTCACCATTCTCATCGGTGAACTCTAATTCCAACAGT
TATAGTGTTACTGATAGTAGTAATAACTCAAAGGGTTCAGGAAATGTGGGGAAAACATTA
AATTCAACAAGTTCCGGTATGTATGAGATCACTAGTAATGGGAATCATGTCCCGGTGAAG
CCGAATCAAGGAAAAAAATCAGTTCGGGTTAATGGACAGGTGGGACCCTCTGTTACAAAC
TCTGTGTTATCTTATGAGGTTCTACCAAGTGTTCGAGAAGCCCCAAGCTCAGAAAAGCAA
AATCTTTTGATTAGGAAGCTACAAATGTGTTGTGTGCTGTTTGATTTTAGCGACCCGACG
AAGAATCTGAAGGAGAAGGATGTCAAGAGGCAGACGTTGCTTGAATTAGTTGATTATATT
TCAGCTGTGAGTTCCAAGTTTAATGAAGTCACAATGCAAGAATTAACGAAAATGGTTGCT
GCCAATTTGTTTAGGACATTACCCTCGTTTAATCATGACAACGGGCTACTGGATATGTTT
GATCCAGAAGAGGATGAGCCCACGATGGAACCCTCGTGGCCTCACCTTCAGGTTGTTTAT
GAGCTTCTTTTGCGATTTGTGGCTTCATCGGAGACGGATGCTAAGCTTGCAAAAAGATAC
GTTGACCACTCTTTTGTCTTGAGATTGCTTGAACTGTTTGATTCAGAGGACCAACGGGAG
CGCGAGTACTTGAAAACAATTCTTCATCGTGTATATGGGAAGTTCATGGTGCATAGGCCA
TTTATCAGGAAAGCCATAAATAATATATTTTACCGTTTTATCTTTGAGACTGAGAAGCAC
AATGGAATTGCAGAATTGCTGGAGATCTTGGGCAGTATAATCAATGGATTTGCTCTGCCT
TTAAAGGAAGAGCACAAACTTTTTCTTGTCCGTGCATTGATTCCCCTTCACAAACCTAAA
TGCTTAGCCATGTACCACCAACAACTCATGTATTGCATCACACAGTTTGTGGAGAAAGAC
TTTAAGTTGTCAGACATCGTGATCAGAGGACTTCTGAAGTACTGGCCAGTCACCAATAGT
GGCAAGGAGGTCATGTTTCTTGGTGAGTTGGAGGAGGTTCTGGAAGCTACCCAAGCTGCA
GAGTTTCAACGGTGCATGGTCCCTTTGTTCCGTCAGATTGGTCGTTGTCTCAACAGCTCT
CATTTTCAGGTAGCTGAACGTGCTCTGTTCCTGTGGAATAACGATCACATAAGAAATCTA
ATAGTTCAGAATCGTGAAGTGATTTTACCCTTAATTTTTCCACTCTTGGAGAAAAACACC
CGTGGTCATTGGAACGAAGCTGTTCAAAGTCTGACGTTGAACGTAAGGAAGATCTTTTCA
GATGCTGATCAAGCACTTTTTGATGAGTGTTTAGAGAAATTCAAAGAAGATGAGATAAAA
GATAAGGAGGCGCAGGAGAGGCGTGAATTGACCTGGAAACGCTTAGAAGATTTAGCAGCA
TCCAACTTTGTGAGTAATGAAGCTGTGCTCGTCTCAAGACTTGCTTCCGCTGTTGTCATT
GACAGCAGCACCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001369
PEP Infomation

pacid=37434012 transcript=PGSC0003DMT400001856 locus=PGSC0003DMG400000695 ID=PGSC0003DMT400001856.v4.03 annot-version=v4.03
Sequence

MIKQILGKLPRKPSKSSSSPNDSSQNEVSPFSSVNSNSNSYSVTDSSNNSKGSGNVGKTL
NSTSSGMYEITSNGNHVPVKPNQGKKSVRVNGQVGPSVTNSVLSYEVLPSVREAPSSEKQ
NLLIRKLQMCCVLFDFSDPTKNLKEKDVKRQTLLELVDYISAVSSKFNEVTMQELTKMVA
ANLFRTLPSFNHDNGLLDMFDPEEDEPTMEPSWPHLQVVYELLLRFVASSETDAKLAKRY
VDHSFVLRLLELFDSEDQREREYLKTILHRVYGKFMVHRPFIRKAINNIFYRFIFETEKH
NGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCLAMYHQQLMYCITQFVEKD
FKLSDIVIRGLLKYWPVTNSGKEVMFLGELEEVLEATQAAEFQRCMVPLFRQIGRCLNSS
HFQVAERALFLWNNDHIRNLIVQNREVILPLIFPLLEKNTRGHWNEAVQSLTLNVRKIFS
DADQALFDECLEKFKEDEIKDKEAQERRELTWKRLEDLAASNFVSNEAVLVSRLASAVVI
DSSTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400001856
Transcript Infomation

pacid=37434012 locus=PGSC0003DMG400000695 ID=PGSC0003DMT400001856.v4.03 annot-version=v4.03
Sequence

ATGATTAAGCAGATTTTGGGGAAGCTTCCTAGGAAGCCGTCAAAATCATCATCATCTCCT
AACGACTCAAGTCAAAATGAAGTTTCACCATTCTCATCGGTGAACTCTAATTCCAACAGT
TATAGTGTTACTGATAGTAGTAATAACTCAAAGGGTTCAGGAAATGTGGGGAAAACATTA
AATTCAACAAGTTCCGGTATGTATGAGATCACTAGTAATGGGAATCATGTCCCGGTGAAG
CCGAATCAAGGAAAAAAATCAGTTCGGGTTAATGGACAGGTGGGACCCTCTGTTACAAAC
TCTGTGTTATCTTATGAGGTTCTACCAAGTGTTCGAGAAGCCCCAAGCTCAGAAAAGCAA
AATCTTTTGATTAGGAAGCTACAAATGTGTTGTGTGCTGTTTGATTTTAGCGACCCGACG
AAGAATCTGAAGGAGAAGGATGTCAAGAGGCAGACGTTGCTTGAATTAGTTGATTATATT
TCAGCTGTGAGTTCCAAGTTTAATGAAGTCACAATGCAAGAATTAACGAAAATGGTTGCT
GCCAATTTGTTTAGGACATTACCCTCGTTTAATCATGACAACGGGCTACTGGATATGTTT
GATCCAGAAGAGGATGAGCCCACGATGGAACCCTCGTGGCCTCACCTTCAGGTTGTTTAT
GAGCTTCTTTTGCGATTTGTGGCTTCATCGGAGACGGATGCTAAGCTTGCAAAAAGATAC
GTTGACCACTCTTTTGTCTTGAGATTGCTTGAACTGTTTGATTCAGAGGACCAACGGGAG
CGCGAGTACTTGAAAACAATTCTTCATCGTGTATATGGGAAGTTCATGGTGCATAGGCCA
TTTATCAGGAAAGCCATAAATAATATATTTTACCGTTTTATCTTTGAGACTGAGAAGCAC
AATGGAATTGCAGAATTGCTGGAGATCTTGGGCAGTATAATCAATGGATTTGCTCTGCCT
TTAAAGGAAGAGCACAAACTTTTTCTTGTCCGTGCATTGATTCCCCTTCACAAACCTAAA
TGCTTAGCCATGTACCACCAACAACTCATGTATTGCATCACACAGTTTGTGGAGAAAGAC
TTTAAGTTGTCAGACATCGTGATCAGAGGACTTCTGAAGTACTGGCCAGTCACCAATAGT
GGCAAGGAGGTCATGTTTCTTGGTGAGTTGGAGGAGGTTCTGGAAGCTACCCAAGCTGCA
GAGTTTCAACGGTGCATGGTCCCTTTGTTCCGTCAGATTGGTCGTTGTCTCAACAGCTCT
CATTTTCAGGTAGCTGAACGTGCTCTGTTCCTGTGGAATAACGATCACATAAGAAATCTA
ATAGTTCAGAATCGTGAAGTGATTTTACCCTTAATTTTTCCACTCTTGGAGAAAAACACC
CGTGGTCATTGGAACGAAGCTGTTCAAAGTCTGACGTTGAACGTAAGGAAGATCTTTTCA
GATGCTGATCAAGCACTTTTTGATGAGTGTTTAGAGAAATTCAAAGAAGATGAGATAAAA
GATAAGGAGGCGCAGGAGAGGCGTGAATTGACCTGGAAACGCTTAGAAGATTTAGCAGCA
TCCAACTTTGTGAGTAATGAAGCTGTGCTCGTCTCAAGACTTGCTTCCGCTGTTGTCATT
GACAGCAGCACCAATTAA