Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001824
CDS Infomation

pacid=37432051 polypeptide=PGSC0003DMP400001345 locus=PGSC0003DMG400000684 ID=PGSC0003DMT400001824.v4.03 annot-version=v4.03
Sequence

ATGAGGCATCAAATTTTCTTGTTATTTGCTTGCACCACAATAGCTCTTTTAGCTTCTTGT
TCTTCATTGGTTTCAGCTGAAGTTGTTGAGCATTCTTTTCATGTGCAAAACCGTACTATA
ACGAGATTGTGCCGTAGACAAGTAATTACTGCTGTAAATGGAAGTCTTCCTGGTCCAACC
ATACGTGTAAAAGAAGGAGACACCCTTGTGGTTCATGTCTACAACCTTTCACCTTACAAT
CTCACTATTCATTGGCATGGAGTTTTCCAGCTATTAAGTGGGTGGGCTGATGGACCGGAG
TTTGCGACCCAGTGCCCGATCCGACCCGGACATAGCTACACATACAAGTTTAAAATAACA
GGACAAGAAGGGACTCTATGGTGGCATGCACACGTGTCATGGCTTAGAGCCACAGTTCAT
GGTGCACTCATTATTCGCCCAAAAAAAGGCCACTCTTTTCCTTTCCCTAAACCTTATAGA
GAATTTCCTATTCTCTTAGGAGAATGGTGGAATGCCAATGTTGTGGATGTGGAGAATGCA
GCGCTAGCAACTGGCTCAGCACCTAATAACTCTAATGCTTACACTATTAACGGCTGGCCG
GGCGATCTTTACCCTTGCTCTGTTAATCAAACGTACAAGTTGAAGGTGAAACACGGAAAA
ACATATCTCTTACGTATCATCAACGCTGCACTCAATAACCAACTTTTTTTCAAGATCGCC
AATCATAAAATGAAAGTTGTCGCGGTTGATGCTGCTTACACTGATCCCTATGTCACGGAT
GTAGTTGTCACCGGGCCGGGCCAGACGACTGACGTCCTCTTGACGGCCGATCAACTACCG
GCGTCGTACTACGTGACGGCTAACCCCTATGCTAGTGCAGCCGGGGTGCCATTTGACAAC
ACCACAACTAGAGGAATTATAGTGTATGAAGATGCATTACTACCATCAACTCCCATAATG
CCAATTCTACCTGCCTTTAATGACACACCAACAGCCCATAAATTTTTCACTAATATAACT
GGGCTTGTAACTGGCCCATTTTGGAACCCACCACCTCGAAAAGTGGACGAACACATGTTT
ATCACTATTGGGCTGGGCCTAACTGCTTGTGGAAAATCAAGAAATGCAACATGTGGAGGC
CCAAATGGACAACGATTTTCGGCTAGTATGAACAATGCATCTTTCCAGTTTCCAGACAAG
ATTTCAATGTTGGAAGCCTTTTTCTACAATGTTGGTGGAATTTACACTACTGATTTCCCA
GACAAACCACCATTGAAGTTTGACTATACAAACCCAAATAATAGCATGAATCCTGCTATT
ATAATGACCAAAAAATCAACAAAAGTGAAGAAAATTAAGTTCAATTCCACAGTTGAAATT
GTGTTCCAAAATACTGCTTTGATTGGGATAGAAAATCATCCTATTCACTTGCATGGATTC
AATTTCCATGTATTGGCACAAGGCTTTGGCAATTATAACCCTGCAGTCGATAGGAAAAAA
TTCAACTTTGTCAATCCACAAGAACGTAACACAATTGGCGTTCCAGTTGGAGGATGGGCT
GTCATTAGATTTCGAGCTAACAATCCAGGTGTATGGTTGATGCATTGTCATTTGGATGTT
CACTTGCCTTGGGGTTTATCAACAGCTTTTGTTGTTGAAAATGGGCCAACATTATCAACT
ATGCTACCTCCTCCTCCACCAGATCTACCTAAATGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001345
PEP Infomation

pacid=37432051 transcript=PGSC0003DMT400001824 locus=PGSC0003DMG400000684 ID=PGSC0003DMT400001824.v4.03 annot-version=v4.03
Sequence

MRHQIFLLFACTTIALLASCSSLVSAEVVEHSFHVQNRTITRLCRRQVITAVNGSLPGPT
IRVKEGDTLVVHVYNLSPYNLTIHWHGVFQLLSGWADGPEFATQCPIRPGHSYTYKFKIT
GQEGTLWWHAHVSWLRATVHGALIIRPKKGHSFPFPKPYREFPILLGEWWNANVVDVENA
ALATGSAPNNSNAYTINGWPGDLYPCSVNQTYKLKVKHGKTYLLRIINAALNNQLFFKIA
NHKMKVVAVDAAYTDPYVTDVVVTGPGQTTDVLLTADQLPASYYVTANPYASAAGVPFDN
TTTRGIIVYEDALLPSTPIMPILPAFNDTPTAHKFFTNITGLVTGPFWNPPPRKVDEHMF
ITIGLGLTACGKSRNATCGGPNGQRFSASMNNASFQFPDKISMLEAFFYNVGGIYTTDFP
DKPPLKFDYTNPNNSMNPAIIMTKKSTKVKKIKFNSTVEIVFQNTALIGIENHPIHLHGF
NFHVLAQGFGNYNPAVDRKKFNFVNPQERNTIGVPVGGWAVIRFRANNPGVWLMHCHLDV
HLPWGLSTAFVVENGPTLSTMLPPPPPDLPKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400001824
Transcript Infomation

pacid=37432051 locus=PGSC0003DMG400000684 ID=PGSC0003DMT400001824.v4.03 annot-version=v4.03
Sequence

ATGAGGCATCAAATTTTCTTGTTATTTGCTTGCACCACAATAGCTCTTTTAGCTTCTTGT
TCTTCATTGGTTTCAGCTGAAGTTGTTGAGCATTCTTTTCATGTGCAAAACCGTACTATA
ACGAGATTGTGCCGTAGACAAGTAATTACTGCTGTAAATGGAAGTCTTCCTGGTCCAACC
ATACGTGTAAAAGAAGGAGACACCCTTGTGGTTCATGTCTACAACCTTTCACCTTACAAT
CTCACTATTCATTGGCATGGAGTTTTCCAGCTATTAAGTGGGTGGGCTGATGGACCGGAG
TTTGCGACCCAGTGCCCGATCCGACCCGGACATAGCTACACATACAAGTTTAAAATAACA
GGACAAGAAGGGACTCTATGGTGGCATGCACACGTGTCATGGCTTAGAGCCACAGTTCAT
GGTGCACTCATTATTCGCCCAAAAAAAGGCCACTCTTTTCCTTTCCCTAAACCTTATAGA
GAATTTCCTATTCTCTTAGGAGAATGGTGGAATGCCAATGTTGTGGATGTGGAGAATGCA
GCGCTAGCAACTGGCTCAGCACCTAATAACTCTAATGCTTACACTATTAACGGCTGGCCG
GGCGATCTTTACCCTTGCTCTGTTAATCAAACGTACAAGTTGAAGGTGAAACACGGAAAA
ACATATCTCTTACGTATCATCAACGCTGCACTCAATAACCAACTTTTTTTCAAGATCGCC
AATCATAAAATGAAAGTTGTCGCGGTTGATGCTGCTTACACTGATCCCTATGTCACGGAT
GTAGTTGTCACCGGGCCGGGCCAGACGACTGACGTCCTCTTGACGGCCGATCAACTACCG
GCGTCGTACTACGTGACGGCTAACCCCTATGCTAGTGCAGCCGGGGTGCCATTTGACAAC
ACCACAACTAGAGGAATTATAGTGTATGAAGATGCATTACTACCATCAACTCCCATAATG
CCAATTCTACCTGCCTTTAATGACACACCAACAGCCCATAAATTTTTCACTAATATAACT
GGGCTTGTAACTGGCCCATTTTGGAACCCACCACCTCGAAAAGTGGACGAACACATGTTT
ATCACTATTGGGCTGGGCCTAACTGCTTGTGGAAAATCAAGAAATGCAACATGTGGAGGC
CCAAATGGACAACGATTTTCGGCTAGTATGAACAATGCATCTTTCCAGTTTCCAGACAAG
ATTTCAATGTTGGAAGCCTTTTTCTACAATGTTGGTGGAATTTACACTACTGATTTCCCA
GACAAACCACCATTGAAGTTTGACTATACAAACCCAAATAATAGCATGAATCCTGCTATT
ATAATGACCAAAAAATCAACAAAAGTGAAGAAAATTAAGTTCAATTCCACAGTTGAAATT
GTGTTCCAAAATACTGCTTTGATTGGGATAGAAAATCATCCTATTCACTTGCATGGATTC
AATTTCCATGTATTGGCACAAGGCTTTGGCAATTATAACCCTGCAGTCGATAGGAAAAAA
TTCAACTTTGTCAATCCACAAGAACGTAACACAATTGGCGTTCCAGTTGGAGGATGGGCT
GTCATTAGATTTCGAGCTAACAATCCAGGTGTATGGTTGATGCATTGTCATTTGGATGTT
CACTTGCCTTGGGGTTTATCAACAGCTTTTGTTGTTGAAAATGGGCCAACATTATCAACT
ATGCTACCTCCTCCTCCACCAGATCTACCTAAATGCTAG