Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001821
CDS Infomation

pacid=37434756 polypeptide=PGSC0003DMP400001343 locus=PGSC0003DMG400000682 ID=PGSC0003DMT400001821.v4.03 annot-version=v4.03
Sequence

ATGGCATCTACGGGACAGCCACAGTCTTCTTTGAAGAGACCTAATCCTGGAGTTAATAGA
GACGGAGATAAACTGGTTATCACTCCTTTAGGGGCTGGAAATGAAGTGGGACGGTCCTGT
GTTTTCATGACTTTTAAAGGGAAAACAATCATGTTTGATTGTGGCATTCATCCGGGTTAC
TCAGGCATGTCTGCCTTACCCTATTTTGATGAAATTGATCCTTCATCTATTGATGTTCTT
CTTGTTACCCATTTTCACTTGGATCATGCTGCATCCCTTCCTTATTTTCTCGAAAAGACT
ACATTTAAAGGGCGTGTTTTCATGACACATGCCACAAAGGCCATATACAAGTTGCTTTTG
TCAGATTATGTTAAAGTTAGCAAAGTCTCTGTTGAAGATATGTTGTTTGATGAACATGAC
ATTCTTCGCTCCATGGAAAAAATTGAGGTTATTGACTTCCATCAGACTATGGAAGTAAAT
GGTATTCGCTTTTGGTGTTATACTGCCGGCCATGTCCTTGGTGCTGCCATGTTTATGGTT
GATATTGCTGGTGTTCGAGTTCTCTATACTGGAGACTATTCCCGTGAAGAAGACAGGCAT
CTCCGCGCAGCTGAGACCCCACAATTTTCTCCAGATGTTTGCATTATAGAATCAACTTAT
GGTGTTCAACTCCATATGCCCCGTCAGATAAGAGAGAAGCTTTTCACTGATGTTATACAT
TCAACACTGATGCAAGGGGGTCGGGTGCTGATTCCTGCTTACGCCTTGGGACGTGCACAG
GAACTTCTCCTTATTCTGGAGGAATATTGGTCTAACCATCCTGAACTAGCTAACTTCCCC
ATATATTATGCTTCTCCACTTGCAAGAAGGTGCATGGCTGTCTATCAGACTTACATCAAT
GCCATGAATGAAAGGATCCGCAATCAATTTGTCAGCTCAAATCCCTTCAATTTCAAACAT
ATATCTTCCCTGAACAGTATTGAAGATTTTATAGACAACAAGCCATGTGTGGTGATGGCA
AGTCCAGGTAGTCTTCAAAGTGGTTTGTCGAGGCAACTGTTCGATAAATGGTGCTCTGAC
AAGAAAAATGCTTGTGTCATACCTGGGTATGTAGTGGAAGGGACCTTGGCGAAGACCATC
ATCAATGAACCGAAGGAAGTCACTCTCACAAATGGCTTGTCTGCTCCACTTAATATGCAG
GTTCATTATATTTCATTCTCAGCTCACGCGGATTATGCTCAGACAAGTACATTCTTGAAA
GAACTTATGCCTCCCAACATAATTCTAGTCCACGGAGCATCTAATGAGATGGATAGACTC
AAGCAGAAACTTACCTCCCTCTTTGCTGATGGGAATACTAAAATTATCACTCCCAAGAAC
TGCCAGTCAGTTGAAATGCACTTCAACTCTGAGAAAATGGCAAAAACCATTGGAAAGCTG
GCTGAAAAGACCCCTGAAGCGGGCGAAATTGTCAGTGGTTTACTTGTGAAGAAAGGTTTC
ACTTACCAGATCATGGCACCTGATGATCTCCATGTCTTTTCTCAGCTATCCACTGCAAAT
GTCACACAGAGAATAACTATCCCCTATTCAGGTGCTTTTGCTGTTATACAACACAGGCTT
AAGCAGATCTATGAAAGTGTAGAGTCCTCAACAGATGAGGAATCCGGTGTACCAACTTTG
CGGGTGCATGAACGAGTGACGGTGAAGCAGGAGTCAGAGAATCATCTCTCCGTTCATTGG
ACAGCAGATCCAATTTGTGACATGGTATCTGACTCTGTCGTGGCATTGGTTCTGAATGCC
AGCAGGGAGATGCCTAAAGTATCAATTGACTCGGAAACTTCCATTAATGAGGAGGAAGAC
GCAAAGAAAACTGAGAAAATAGTCCATGCACTCCTGGTTTCTATGTTTGGTAATGTGAAA
TTTGGGGACGATGGTAAGCTGATAATCAATTTTGATGGGATTTTGGCTCATCTGGACAAA
CAAACTGGTGACGTTGAATGTGAAAATGAAGCTCTCAAGGAGAGAGTTAAGACTGCATAC
TGGCGAATCAGAAGTGCTGTGAAACCAATACCGCTTTCTGTATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001343
PEP Infomation

pacid=37434756 transcript=PGSC0003DMT400001821 locus=PGSC0003DMG400000682 ID=PGSC0003DMT400001821.v4.03 annot-version=v4.03
Sequence

MASTGQPQSSLKRPNPGVNRDGDKLVITPLGAGNEVGRSCVFMTFKGKTIMFDCGIHPGY
SGMSALPYFDEIDPSSIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL
SDYVKVSKVSVEDMLFDEHDILRSMEKIEVIDFHQTMEVNGIRFWCYTAGHVLGAAMFMV
DIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQLHMPRQIREKLFTDVIH
STLMQGGRVLIPAYALGRAQELLLILEEYWSNHPELANFPIYYASPLARRCMAVYQTYIN
AMNERIRNQFVSSNPFNFKHISSLNSIEDFIDNKPCVVMASPGSLQSGLSRQLFDKWCSD
KKNACVIPGYVVEGTLAKTIINEPKEVTLTNGLSAPLNMQVHYISFSAHADYAQTSTFLK
ELMPPNIILVHGASNEMDRLKQKLTSLFADGNTKIITPKNCQSVEMHFNSEKMAKTIGKL
AEKTPEAGEIVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFAVIQHRL
KQIYESVESSTDEESGVPTLRVHERVTVKQESENHLSVHWTADPICDMVSDSVVALVLNA
SREMPKVSIDSETSINEEEDAKKTEKIVHALLVSMFGNVKFGDDGKLIINFDGILAHLDK
QTGDVECENEALKERVKTAYWRIRSAVKPIPLSVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400001821
Transcript Infomation

pacid=37434756 locus=PGSC0003DMG400000682 ID=PGSC0003DMT400001821.v4.03 annot-version=v4.03
Sequence

ATGGCATCTACGGGACAGCCACAGTCTTCTTTGAAGAGACCTAATCCTGGAGTTAATAGA
GACGGAGATAAACTGGTTATCACTCCTTTAGGGGCTGGAAATGAAGTGGGACGGTCCTGT
GTTTTCATGACTTTTAAAGGGAAAACAATCATGTTTGATTGTGGCATTCATCCGGGTTAC
TCAGGCATGTCTGCCTTACCCTATTTTGATGAAATTGATCCTTCATCTATTGATGTTCTT
CTTGTTACCCATTTTCACTTGGATCATGCTGCATCCCTTCCTTATTTTCTCGAAAAGACT
ACATTTAAAGGGCGTGTTTTCATGACACATGCCACAAAGGCCATATACAAGTTGCTTTTG
TCAGATTATGTTAAAGTTAGCAAAGTCTCTGTTGAAGATATGTTGTTTGATGAACATGAC
ATTCTTCGCTCCATGGAAAAAATTGAGGTTATTGACTTCCATCAGACTATGGAAGTAAAT
GGTATTCGCTTTTGGTGTTATACTGCCGGCCATGTCCTTGGTGCTGCCATGTTTATGGTT
GATATTGCTGGTGTTCGAGTTCTCTATACTGGAGACTATTCCCGTGAAGAAGACAGGCAT
CTCCGCGCAGCTGAGACCCCACAATTTTCTCCAGATGTTTGCATTATAGAATCAACTTAT
GGTGTTCAACTCCATATGCCCCGTCAGATAAGAGAGAAGCTTTTCACTGATGTTATACAT
TCAACACTGATGCAAGGGGGTCGGGTGCTGATTCCTGCTTACGCCTTGGGACGTGCACAG
GAACTTCTCCTTATTCTGGAGGAATATTGGTCTAACCATCCTGAACTAGCTAACTTCCCC
ATATATTATGCTTCTCCACTTGCAAGAAGGTGCATGGCTGTCTATCAGACTTACATCAAT
GCCATGAATGAAAGGATCCGCAATCAATTTGTCAGCTCAAATCCCTTCAATTTCAAACAT
ATATCTTCCCTGAACAGTATTGAAGATTTTATAGACAACAAGCCATGTGTGGTGATGGCA
AGTCCAGGTAGTCTTCAAAGTGGTTTGTCGAGGCAACTGTTCGATAAATGGTGCTCTGAC
AAGAAAAATGCTTGTGTCATACCTGGGTATGTAGTGGAAGGGACCTTGGCGAAGACCATC
ATCAATGAACCGAAGGAAGTCACTCTCACAAATGGCTTGTCTGCTCCACTTAATATGCAG
GTTCATTATATTTCATTCTCAGCTCACGCGGATTATGCTCAGACAAGTACATTCTTGAAA
GAACTTATGCCTCCCAACATAATTCTAGTCCACGGAGCATCTAATGAGATGGATAGACTC
AAGCAGAAACTTACCTCCCTCTTTGCTGATGGGAATACTAAAATTATCACTCCCAAGAAC
TGCCAGTCAGTTGAAATGCACTTCAACTCTGAGAAAATGGCAAAAACCATTGGAAAGCTG
GCTGAAAAGACCCCTGAAGCGGGCGAAATTGTCAGTGGTTTACTTGTGAAGAAAGGTTTC
ACTTACCAGATCATGGCACCTGATGATCTCCATGTCTTTTCTCAGCTATCCACTGCAAAT
GTCACACAGAGAATAACTATCCCCTATTCAGGTGCTTTTGCTGTTATACAACACAGGCTT
AAGCAGATCTATGAAAGTGTAGAGTCCTCAACAGATGAGGAATCCGGTGTACCAACTTTG
CGGGTGCATGAACGAGTGACGGTGAAGCAGGAGTCAGAGAATCATCTCTCCGTTCATTGG
ACAGCAGATCCAATTTGTGACATGGTATCTGACTCTGTCGTGGCATTGGTTCTGAATGCC
AGCAGGGAGATGCCTAAAGTATCAATTGACTCGGAAACTTCCATTAATGAGGAGGAAGAC
GCAAAGAAAACTGAGAAAATAGTCCATGCACTCCTGGTTTCTATGTTTGGTAATGTGAAA
TTTGGGGACGATGGTAAGCTGATAATCAATTTTGATGGGATTTTGGCTCATCTGGACAAA
CAAACTGGTGACGTTGAATGTGAAAATGAAGCTCTCAAGGAGAGAGTTAAGACTGCATAC
TGGCGAATCAGAAGTGCTGTGAAACCAATACCGCTTTCTGTATCTTAG