Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001785
CDS Infomation

pacid=37433092 polypeptide=PGSC0003DMP400001319 locus=PGSC0003DMG401000669 ID=PGSC0003DMT400001785.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAACAGCCGTCGGCCCCGGACGATCGACATCGTCGTACAGCGAAGTCCAACAC
AACCGTCTCATTGTATCGCTTCCTCTGCCTTCTGTACTCAAAAAGCCCTTTTCAGTCATT
GATGGCCCTCCGAGTTCCGCCGCTGGAAATCCAGGTGAAATTGCAAAGCTTTTTCCAAAT
CTGTTTGGGCAGCCTTCCGTGTCATTACTTCCAGGTCACACATCTGGAGCTGCATTGGAT
CGTACTCTTAAAATTGGGGTTGTATTGTCCGGTGGACAGGCTCCTGGTGGGCACAATGTC
ATCTCTGGAATTTTTGACTATTTGCAGGAGAAAACGAAAAATAGCACACTCTATGGATTC
AAGGGAGGTCCAGCAGGGATAATGAACTGTAAATATGTAGAGTTGACAACGGATTTTGTT
TATCCTTACAGAAATCAAGGTGGCTTTGATATGATCTGTAGTGGTAGAGACAAGATAGAA
AGTGATGAACAGTTTAATCAAGCTGCAGAAACAGCTAAGAAACTTGACTTAGATGGGATT
GTCGTGATTGGTGGAGATGATTCAAATACAAATGCTTGTCTTCTAGCTGAGAACTTCAGG
GGTAAAGGTCTGAAAACACGGGTTATTGGATGCCCGAAGACAATTGATGGTGATTTGAAA
AGCAAAGAAGTTCCCACTAGTTTCGGATTTGATACTGCTTGCAAGATATATGCAGAAATG
ATTGGAAATGTCATGATAGATGCTCGTTCAACAGGAAAATACTATCACTTTGTAAGGCTT
ATGGGCCGTGCTGCATCACACATCACATTGGAGTGTGCTCTTCAAACCCATCCAAATATT
ACCATCATTGGCGAAGAGGTTGCAGCACAGAAGCAAACACTTAAAAGTGTTACAGATTAC
ATCGTAGGAGTAATTTGTAAACGAGCAAAACTTGGTTATAATTATGGAGTTATACTAATA
CCTGAAGGCCTGATTGACTTCATTCCAGAGGTGCAACAGTTGATTGCAGAGCTCAATGAA
ATCCTGGCTCATGATGTTATTGATGAAGCTGGCAGTTGGAAAAAGAAACTCCAAAGCCAG
TCTCACGATCTCTTTGAACTCCTACCACAAGCAATTCAGGAGCAGTTACTTCTTGAAAGA
GATCCACATGGAAATGTCCAGGTTGCCAAAATAGAAACTGAGAAAATGCTTATTCAAATG
GTGGAAGCTGAACTCGAAAGCAAGAGAAAGGAAGGTTCATATACCAAACAATTCAAAGGG
CAGTCTCATTTTTTTGGTTACGAGGGTAGATGTGGTTTGCCTTCAAATTTTGACTCCAAC
TATTGCTATGCATTGGGTTATGGGGCTGGAGCACTTCTTCAGTCTGGCAAAACAGGCTTG
ATTTCTTCTGTGGGAAATTTGAAAGCTCCAGTTGAAGACTGGACAGTCGGTGGAACAGCA
CTAACATCTTTGATGGATGTGGAAAGGAGACATGGTAAGTTCAAGCCTGTGATTAAGAAG
GCAATGGTGGAACTAGAAGGTGCTCCTTTCAAAAAGTTTGCTTCCTTGCGAGAAGAGTGG
GCTCTAAAGAATCGATACTTCAGCCCTGGTCCACTTCAATTTGTTGGCCCAACATCAAAT
GAAACCAATCACACTTTAATGCTGGAGTTGGGAGCCAAAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001319
PEP Infomation

pacid=37433092 transcript=PGSC0003DMT400001785 locus=PGSC0003DMG401000669 ID=PGSC0003DMT400001785.v4.03 annot-version=v4.03
Sequence

MAATAVGPGRSTSSYSEVQHNRLIVSLPLPSVLKKPFSVIDGPPSSAAGNPGEIAKLFPN
LFGQPSVSLLPGHTSGAALDRTLKIGVVLSGGQAPGGHNVISGIFDYLQEKTKNSTLYGF
KGGPAGIMNCKYVELTTDFVYPYRNQGGFDMICSGRDKIESDEQFNQAAETAKKLDLDGI
VVIGGDDSNTNACLLAENFRGKGLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEM
IGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAQKQTLKSVTDY
IVGVICKRAKLGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDVIDEAGSWKKKLQSQ
SHDLFELLPQAIQEQLLLERDPHGNVQVAKIETEKMLIQMVEAELESKRKEGSYTKQFKG
QSHFFGYEGRCGLPSNFDSNYCYALGYGAGALLQSGKTGLISSVGNLKAPVEDWTVGGTA
LTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYFSPGPLQFVGPTSN
ETNHTLMLELGAKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400001785
Transcript Infomation

pacid=37433092 locus=PGSC0003DMG401000669 ID=PGSC0003DMT400001785.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAACAGCCGTCGGCCCCGGACGATCGACATCGTCGTACAGCGAAGTCCAACAC
AACCGTCTCATTGTATCGCTTCCTCTGCCTTCTGTACTCAAAAAGCCCTTTTCAGTCATT
GATGGCCCTCCGAGTTCCGCCGCTGGAAATCCAGGTGAAATTGCAAAGCTTTTTCCAAAT
CTGTTTGGGCAGCCTTCCGTGTCATTACTTCCAGGTCACACATCTGGAGCTGCATTGGAT
CGTACTCTTAAAATTGGGGTTGTATTGTCCGGTGGACAGGCTCCTGGTGGGCACAATGTC
ATCTCTGGAATTTTTGACTATTTGCAGGAGAAAACGAAAAATAGCACACTCTATGGATTC
AAGGGAGGTCCAGCAGGGATAATGAACTGTAAATATGTAGAGTTGACAACGGATTTTGTT
TATCCTTACAGAAATCAAGGTGGCTTTGATATGATCTGTAGTGGTAGAGACAAGATAGAA
AGTGATGAACAGTTTAATCAAGCTGCAGAAACAGCTAAGAAACTTGACTTAGATGGGATT
GTCGTGATTGGTGGAGATGATTCAAATACAAATGCTTGTCTTCTAGCTGAGAACTTCAGG
GGTAAAGGTCTGAAAACACGGGTTATTGGATGCCCGAAGACAATTGATGGTGATTTGAAA
AGCAAAGAAGTTCCCACTAGTTTCGGATTTGATACTGCTTGCAAGATATATGCAGAAATG
ATTGGAAATGTCATGATAGATGCTCGTTCAACAGGAAAATACTATCACTTTGTAAGGCTT
ATGGGCCGTGCTGCATCACACATCACATTGGAGTGTGCTCTTCAAACCCATCCAAATATT
ACCATCATTGGCGAAGAGGTTGCAGCACAGAAGCAAACACTTAAAAGTGTTACAGATTAC
ATCGTAGGAGTAATTTGTAAACGAGCAAAACTTGGTTATAATTATGGAGTTATACTAATA
CCTGAAGGCCTGATTGACTTCATTCCAGAGGTGCAACAGTTGATTGCAGAGCTCAATGAA
ATCCTGGCTCATGATGTTATTGATGAAGCTGGCAGTTGGAAAAAGAAACTCCAAAGCCAG
TCTCACGATCTCTTTGAACTCCTACCACAAGCAATTCAGGAGCAGTTACTTCTTGAAAGA
GATCCACATGGAAATGTCCAGGTTGCCAAAATAGAAACTGAGAAAATGCTTATTCAAATG
GTGGAAGCTGAACTCGAAAGCAAGAGAAAGGAAGGTTCATATACCAAACAATTCAAAGGG
CAGTCTCATTTTTTTGGTTACGAGGGTAGATGTGGTTTGCCTTCAAATTTTGACTCCAAC
TATTGCTATGCATTGGGTTATGGGGCTGGAGCACTTCTTCAGTCTGGCAAAACAGGCTTG
ATTTCTTCTGTGGGAAATTTGAAAGCTCCAGTTGAAGACTGGACAGTCGGTGGAACAGCA
CTAACATCTTTGATGGATGTGGAAAGGAGACATGGTAAGTTCAAGCCTGTGATTAAGAAG
GCAATGGTGGAACTAGAAGGTGCTCCTTTCAAAAAGTTTGCTTCCTTGCGAGAAGAGTGG
GCTCTAAAGAATCGATACTTCAGCCCTGGTCCACTTCAATTTGTTGGCCCAACATCAAAT
GAAACCAATCACACTTTAATGCTGGAGTTGGGAGCCAAAGCTTAA