Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001781
CDS Infomation

pacid=37433947 polypeptide=PGSC0003DMP400001315 locus=PGSC0003DMG401000668 ID=PGSC0003DMT400001781.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTTTTTTTTTGCACCATTTTTCTCTTCTTCTTTCACTCTCCACCATTTTTTCT
TCTTCTGCTATAGCTTTTGATTATGCAGATGCTCTTTCCAAGAGTCTCCTTTACTTTGAA
GCTCAAAGGTCCGGTCGATTACCTTACAATCAACGTGTCAGTTGGCGCGACCACTCTGGT
TTAACTGATGGTTTAGAAGAAGGAGTGGATTTAGTTGGAGGATACTACGATGCTGGTGAC
CATGTGAAATTTGGTCTACCAATGGCATTTACAGTAACAATGTTGTCATGGAGTGTTATT
GAATATGGAGAAGAGATTTCGTATGTAGGAGAAATTGAACATGCTTTTGAAGCTATCAAA
TGGGGTACTGATTATTTCATCAAAGCACATACTAGTCCAAATGTATTATGGGCTGAGGTT
GGAGATGGAGATACTGATCATTACTGTTGGCAACGTCCGGAGGACATGACAACTTCTCGT
CGATCATTCAAGATCGACGAGAATAACCCCGGCTCTGACTTAGCTGGGGAGACAGCTGCC
GCAATGGCAGCCGCTTCTATTGTGTTTAGGAAAAGTAATCCGCATTACTCTCACTTACTA
TTGCACCATGCCCAACAGTTGTTTGAGTTTGGTGACAAGTACAGAGGAAAATATGACAAA
AGTGTGGGAGTAGTGAAAAACTATTATGGATCAGTGAGTGGGTACGAAGATGAGTTGTTG
TGGGCAGCGTTATGGCTATACAAAGCCACCGACAAAGAAGATTATTTGGAGTATGTAATT
AACAAGGCAAATTCATTTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTGGGATGTT
AAATTTGCTGGTCTACAAATTATTGCTTCCAAGATACTACAGGAGAAAAAGCACAAGAAA
CACATCCACATACAAGAACAATATCGTTCGAAAGCCGAACACTACATATGTTCATGTCTC
AACAAAAACAACGGTACCACCAACGTTGATCGCACCCCAGGCGGACTACTATACGTCCGT
CAATGGAACAACATGCAGTATGTATCGACCGCGGCCTTCCTCCTCACATTCTACTCAGAT
TTCCTTAAAAATTTCGACCAAAAAATCGTCTGTCATGGAGGAATAGTTGATCATGAAGAA
CTATTCAATTTTGCTAAATCCCAAGTGGACTACATTTTGGGCTCAAACCCAAAAAACATG
AGTTATCTTGTGGGGTTTGGCCCAAATTATCCAAAAAGAGTACACCATAGAGGGGCTTCA
ATTGTGTCTTATAGAGAGAACAAGGGCTTTATTGGATGTACACAAGGGTATGATTATTGG
TACAACAAAAATGGGCCAAACCCAAATGTTTTAATTGGGGCAATTGTTGGTGGGCCTGAT
AATCAAGATGAGTTTAATGATGACAGAGCAAATTATGTGCAAACAGAGGCTTGTACATAT
AATACAGCACCTCTTGTGGGTATTTTTGCTAAGTTGAATTTTTTGAGTTCACCATTAATT
GCATCTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001315
PEP Infomation

pacid=37433947 transcript=PGSC0003DMT400001781 locus=PGSC0003DMG401000668 ID=PGSC0003DMT400001781.v4.03 annot-version=v4.03
Sequence

MKSFFLHHFSLLLSLSTIFSSSAIAFDYADALSKSLLYFEAQRSGRLPYNQRVSWRDHSG
LTDGLEEGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVIEYGEEISYVGEIEHAFEAIK
WGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRSFKIDENNPGSDLAGETAA
AMAAASIVFRKSNPHYSHLLLHHAQQLFEFGDKYRGKYDKSVGVVKNYYGSVSGYEDELL
WAALWLYKATDKEDYLEYVINKANSFGGIGWAITEFSWDVKFAGLQIIASKILQEKKHKK
HIHIQEQYRSKAEHYICSCLNKNNGTTNVDRTPGGLLYVRQWNNMQYVSTAAFLLTFYSD
FLKNFDQKIVCHGGIVDHEELFNFAKSQVDYILGSNPKNMSYLVGFGPNYPKRVHHRGAS
IVSYRENKGFIGCTQGYDYWYNKNGPNPNVLIGAIVGGPDNQDEFNDDRANYVQTEACTY
NTAPLVGIFAKLNFLSSPLIASF*

Transcript Sequence

Transcript ID

PGSC0003DMT400001781
Transcript Infomation

pacid=37433947 locus=PGSC0003DMG401000668 ID=PGSC0003DMT400001781.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTTTTTTTTTGCACCATTTTTCTCTTCTTCTTTCACTCTCCACCATTTTTTCT
TCTTCTGCTATAGCTTTTGATTATGCAGATGCTCTTTCCAAGAGTCTCCTTTACTTTGAA
GCTCAAAGGTCCGGTCGATTACCTTACAATCAACGTGTCAGTTGGCGCGACCACTCTGGT
TTAACTGATGGTTTAGAAGAAGGAGTGGATTTAGTTGGAGGATACTACGATGCTGGTGAC
CATGTGAAATTTGGTCTACCAATGGCATTTACAGTAACAATGTTGTCATGGAGTGTTATT
GAATATGGAGAAGAGATTTCGTATGTAGGAGAAATTGAACATGCTTTTGAAGCTATCAAA
TGGGGTACTGATTATTTCATCAAAGCACATACTAGTCCAAATGTATTATGGGCTGAGGTT
GGAGATGGAGATACTGATCATTACTGTTGGCAACGTCCGGAGGACATGACAACTTCTCGT
CGATCATTCAAGATCGACGAGAATAACCCCGGCTCTGACTTAGCTGGGGAGACAGCTGCC
GCAATGGCAGCCGCTTCTATTGTGTTTAGGAAAAGTAATCCGCATTACTCTCACTTACTA
TTGCACCATGCCCAACAGTTGTTTGAGTTTGGTGACAAGTACAGAGGAAAATATGACAAA
AGTGTGGGAGTAGTGAAAAACTATTATGGATCAGTGAGTGGGTACGAAGATGAGTTGTTG
TGGGCAGCGTTATGGCTATACAAAGCCACCGACAAAGAAGATTATTTGGAGTATGTAATT
AACAAGGCAAATTCATTTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTGGGATGTT
AAATTTGCTGGTCTACAAATTATTGCTTCCAAGATACTACAGGAGAAAAAGCACAAGAAA
CACATCCACATACAAGAACAATATCGTTCGAAAGCCGAACACTACATATGTTCATGTCTC
AACAAAAACAACGGTACCACCAACGTTGATCGCACCCCAGGCGGACTACTATACGTCCGT
CAATGGAACAACATGCAGTATGTATCGACCGCGGCCTTCCTCCTCACATTCTACTCAGAT
TTCCTTAAAAATTTCGACCAAAAAATCGTCTGTCATGGAGGAATAGTTGATCATGAAGAA
CTATTCAATTTTGCTAAATCCCAAGTGGACTACATTTTGGGCTCAAACCCAAAAAACATG
AGTTATCTTGTGGGGTTTGGCCCAAATTATCCAAAAAGAGTACACCATAGAGGGGCTTCA
ATTGTGTCTTATAGAGAGAACAAGGGCTTTATTGGATGTACACAAGGGTATGATTATTGG
TACAACAAAAATGGGCCAAACCCAAATGTTTTAATTGGGGCAATTGTTGGTGGGCCTGAT
AATCAAGATGAGTTTAATGATGACAGAGCAAATTATGTGCAAACAGAGGCTTGTACATAT
AATACAGCACCTCTTGTGGGTATTTTTGCTAAGTTGAATTTTTTGAGTTCACCATTAATT
GCATCTTTCTAA