Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001773
CDS Infomation

pacid=37431324 polypeptide=PGSC0003DMP400001309 locus=PGSC0003DMG400000664 ID=PGSC0003DMT400001773.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCAAGCTAAAGAAGGCAATTGCTGCAGTGAAAGATCAAACCAGCATTAGCCTT
GCCAAAGTTTCCACCAACACTTCCTCAACTCTTGAAGTTGCTGTCCTAAAAGCCACAACA
CACGATGATGTCCCCGTGGATGAGCGTTACATCCACGAGGTTGTCCAATTAGTCTCTTCC
AACAAGGCCTACGCGGGTGCCTGTGCTCGTGCCATTGGCAAACGCATTGGTCGTACTAGG
AATTGGATCGTTGCCCTCAAATCATTAATACTTGTCCTTAGAATCTTCCAAGATGGTGAT
CCTTATTTCCCTCGAGAAGTCCTCCACGCCATGAAACGTGGTGCCAAGATTCTCAACCTT
TCAAATTTTCGCGATGATTCAAACTCTAGCCCTTGGGATTTCACCGCCTTTATTAGAACG
TTTGCACTCTATCTTGACGAGCGTTTGGATTGTTTTCTCACGGGGAAACTCCAAAAGAGA
TGCAACTATAATGACCGTGAAAATTCCAATTATTTACGGAGTTGCAGTGATAACAGCAGG
AGCAGGAGCAGGAGCAGGAGCAGAAACAGGACAAATGAGGCGATACGCGAAATGAAACCA
CCAATGCTACTTGACAAGATTTCATATTGGCAAAGATTGCTTGAAAGGGCAATTGCTACA
AGGCCAACAGGTGCAGCCCAAACCAATTGTCTAGTACAAGCTGCTTTGTATGCTGTGGTA
CAAGAAAGTTTTGATCTTTACAAAGATATATCTGATGGACTAACTCTTGTTCTTGATAGT
TTTTTTCATTTACCATACCAAACATGTGTAAATGCCTTCCAAACATGTGTTAAATCCACG
AAGCAATTCGAGGAGATCAACTCGTTCTATTCATTATGTAAAAGCATTGGTGTAGGCAGG
ACATCAGAGTATCCGAGTGTGCAAATTATAACAGACGAGTTAATTGAGTCATTACAAGAA
TTTCTCAAGGATCAATCTTCATTTCCAGTGAAATCTTCAGGAGATGTAGTTCTTCAAAGA
CCAGGCTCAATGAAGTCATCAAGAAGTAGGTTTGATAGTTACGGTGGACAATCCGAATTC
TCTCTAGCATCGAGTGAGCCATATTCGGACAGAAGTCCAACTATGTCTGGGAATGGTTCA
CCTTGTAGTTCACTAGAAGATCTAATAAGAGCCACGGTAACAGGGAGGAGCCCATCCATT
TCAATCGATTTGGAGGCCTATTCAGATATTCGATTCAAGAAGCAGTTTATTGATGATATA
TGTGATACAGGTTCTGCAAGGTCATTGCCAGTTTCCATGATTGATCTTGTTTCTTTATCA
GAAGATAATGGAAATATTGACAACGAATACGAAGAAGTACAAGATCAGAAGCAACAACCT
GTTGTAGAGAAAGCGAAAGAACTTAACTCTAAAGAAGCTAAACCTAAACAAGAACAGATC
AAGGATAAACAAAAGCCTACATTAAGTTCAAGTTCATCTAAAGGATGGGAAGATGTACTA
AATGAGGCTTTAACGCCATCATCAACATCTATTAACGCCTTTCAAGAACAACAAGATCCA
AAAGAGGTGTTAAGAAATGAAACGAATGTATCGCCTGTTAAGTATTCTTCGAGCAATGCT
TGGGATTTGGCACTATTTGAAGCAATCCCACAAACAAATTCAGTTCAACCCATGCCTAAT
ACTGTTGCTAACAACATTAACAGCTACGACACTTCCACATTGCCATCTTTCAACGCCTTC
CAAGAAAATCAAGAACCGGAACAAGTATCAAGAAAAGGTGCAAATAGTGGTTGGGATATG
GTATTATTTGAAACAACCCCACAAACAACAGCATCACAACCTATGCCTACTACCCCTAAC
AACGCTAACAACTTCAATTCTTCCTACTTGGACGAATTGTATAATCAGAACTCATCAACA
TTGCTTCCAATTAGTGGCTTAAAACCAAATATTAATATGAATATCTATAATCAAATTCCA
GTAATGGAATCAGCCAACCATTACAATCCGTTTTTACAAGACATATCGACAGAGCAGCCT
GCAACGCCATCAACACCTTTGCCTACATTTCAAGCAACACCAACATTTAGTGGTCAGAAT
TCTTCATCAGCAGTGCAGAATGACTTGAATTCCGATCCGTTTGGGACGTTTCCAAGTAGT
GATCAGATGTTAAATGGTGCAGTGAATCAGAAGGATTTTTCGGATGAACAACAGTTATGG
TTACAGAACCAAAACAAGATCATAGCTAAGCATATGTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001309
PEP Infomation

pacid=37431324 transcript=PGSC0003DMT400001773 locus=PGSC0003DMG400000664 ID=PGSC0003DMT400001773.v4.03 annot-version=v4.03
Sequence

MPSKLKKAIAAVKDQTSISLAKVSTNTSSTLEVAVLKATTHDDVPVDERYIHEVVQLVSS
NKAYAGACARAIGKRIGRTRNWIVALKSLILVLRIFQDGDPYFPREVLHAMKRGAKILNL
SNFRDDSNSSPWDFTAFIRTFALYLDERLDCFLTGKLQKRCNYNDRENSNYLRSCSDNSR
SRSRSRSRNRTNEAIREMKPPMLLDKISYWQRLLERAIATRPTGAAQTNCLVQAALYAVV
QESFDLYKDISDGLTLVLDSFFHLPYQTCVNAFQTCVKSTKQFEEINSFYSLCKSIGVGR
TSEYPSVQIITDELIESLQEFLKDQSSFPVKSSGDVVLQRPGSMKSSRSRFDSYGGQSEF
SLASSEPYSDRSPTMSGNGSPCSSLEDLIRATVTGRSPSISIDLEAYSDIRFKKQFIDDI
CDTGSARSLPVSMIDLVSLSEDNGNIDNEYEEVQDQKQQPVVEKAKELNSKEAKPKQEQI
KDKQKPTLSSSSSKGWEDVLNEALTPSSTSINAFQEQQDPKEVLRNETNVSPVKYSSSNA
WDLALFEAIPQTNSVQPMPNTVANNINSYDTSTLPSFNAFQENQEPEQVSRKGANSGWDM
VLFETTPQTTASQPMPTTPNNANNFNSSYLDELYNQNSSTLLPISGLKPNINMNIYNQIP
VMESANHYNPFLQDISTEQPATPSTPLPTFQATPTFSGQNSSSAVQNDLNSDPFGTFPSS
DQMLNGAVNQKDFSDEQQLWLQNQNKIIAKHMS*

Transcript Sequence

Transcript ID

PGSC0003DMT400001773
Transcript Infomation

pacid=37431324 locus=PGSC0003DMG400000664 ID=PGSC0003DMT400001773.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCAAGCTAAAGAAGGCAATTGCTGCAGTGAAAGATCAAACCAGCATTAGCCTT
GCCAAAGTTTCCACCAACACTTCCTCAACTCTTGAAGTTGCTGTCCTAAAAGCCACAACA
CACGATGATGTCCCCGTGGATGAGCGTTACATCCACGAGGTTGTCCAATTAGTCTCTTCC
AACAAGGCCTACGCGGGTGCCTGTGCTCGTGCCATTGGCAAACGCATTGGTCGTACTAGG
AATTGGATCGTTGCCCTCAAATCATTAATACTTGTCCTTAGAATCTTCCAAGATGGTGAT
CCTTATTTCCCTCGAGAAGTCCTCCACGCCATGAAACGTGGTGCCAAGATTCTCAACCTT
TCAAATTTTCGCGATGATTCAAACTCTAGCCCTTGGGATTTCACCGCCTTTATTAGAACG
TTTGCACTCTATCTTGACGAGCGTTTGGATTGTTTTCTCACGGGGAAACTCCAAAAGAGA
TGCAACTATAATGACCGTGAAAATTCCAATTATTTACGGAGTTGCAGTGATAACAGCAGG
AGCAGGAGCAGGAGCAGGAGCAGAAACAGGACAAATGAGGCGATACGCGAAATGAAACCA
CCAATGCTACTTGACAAGATTTCATATTGGCAAAGATTGCTTGAAAGGGCAATTGCTACA
AGGCCAACAGGTGCAGCCCAAACCAATTGTCTAGTACAAGCTGCTTTGTATGCTGTGGTA
CAAGAAAGTTTTGATCTTTACAAAGATATATCTGATGGACTAACTCTTGTTCTTGATAGT
TTTTTTCATTTACCATACCAAACATGTGTAAATGCCTTCCAAACATGTGTTAAATCCACG
AAGCAATTCGAGGAGATCAACTCGTTCTATTCATTATGTAAAAGCATTGGTGTAGGCAGG
ACATCAGAGTATCCGAGTGTGCAAATTATAACAGACGAGTTAATTGAGTCATTACAAGAA
TTTCTCAAGGATCAATCTTCATTTCCAGTGAAATCTTCAGGAGATGTAGTTCTTCAAAGA
CCAGGCTCAATGAAGTCATCAAGAAGTAGGTTTGATAGTTACGGTGGACAATCCGAATTC
TCTCTAGCATCGAGTGAGCCATATTCGGACAGAAGTCCAACTATGTCTGGGAATGGTTCA
CCTTGTAGTTCACTAGAAGATCTAATAAGAGCCACGGTAACAGGGAGGAGCCCATCCATT
TCAATCGATTTGGAGGCCTATTCAGATATTCGATTCAAGAAGCAGTTTATTGATGATATA
TGTGATACAGGTTCTGCAAGGTCATTGCCAGTTTCCATGATTGATCTTGTTTCTTTATCA
GAAGATAATGGAAATATTGACAACGAATACGAAGAAGTACAAGATCAGAAGCAACAACCT
GTTGTAGAGAAAGCGAAAGAACTTAACTCTAAAGAAGCTAAACCTAAACAAGAACAGATC
AAGGATAAACAAAAGCCTACATTAAGTTCAAGTTCATCTAAAGGATGGGAAGATGTACTA
AATGAGGCTTTAACGCCATCATCAACATCTATTAACGCCTTTCAAGAACAACAAGATCCA
AAAGAGGTGTTAAGAAATGAAACGAATGTATCGCCTGTTAAGTATTCTTCGAGCAATGCT
TGGGATTTGGCACTATTTGAAGCAATCCCACAAACAAATTCAGTTCAACCCATGCCTAAT
ACTGTTGCTAACAACATTAACAGCTACGACACTTCCACATTGCCATCTTTCAACGCCTTC
CAAGAAAATCAAGAACCGGAACAAGTATCAAGAAAAGGTGCAAATAGTGGTTGGGATATG
GTATTATTTGAAACAACCCCACAAACAACAGCATCACAACCTATGCCTACTACCCCTAAC
AACGCTAACAACTTCAATTCTTCCTACTTGGACGAATTGTATAATCAGAACTCATCAACA
TTGCTTCCAATTAGTGGCTTAAAACCAAATATTAATATGAATATCTATAATCAAATTCCA
GTAATGGAATCAGCCAACCATTACAATCCGTTTTTACAAGACATATCGACAGAGCAGCCT
GCAACGCCATCAACACCTTTGCCTACATTTCAAGCAACACCAACATTTAGTGGTCAGAAT
TCTTCATCAGCAGTGCAGAATGACTTGAATTCCGATCCGTTTGGGACGTTTCCAAGTAGT
GATCAGATGTTAAATGGTGCAGTGAATCAGAAGGATTTTTCGGATGAACAACAGTTATGG
TTACAGAACCAAAACAAGATCATAGCTAAGCATATGTCTTAA