Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001772
CDS Infomation

pacid=37434387 polypeptide=PGSC0003DMP400001308 locus=PGSC0003DMG400000663 ID=PGSC0003DMT400001772.v4.03 annot-version=v4.03
Sequence

ATGCATCGTACCGGCGAACCACCAGCTCAGCAGCCGTCTAAGGCACAAACCCTAGACCAA
ATCAACCAGCTTCTCTCTCATTTACTACCATTTTCTCTTTCTGTCAAGTCTTTTACTTCT
CGCTGGCAGGTGCTCCGGTCGAAGCTTGCTACTGTTAAGTCGCTTTTGACGGAAATATCT
GATTCTCCTCACTGGTCGGAAAATGAGCTGCTTCCGACCTTGCTGCCTAATCTTCTTTCC
ACTTTGCTTCGTGTTCAGACTCTATGTGAGGAGTGTTCTGACCCGGCGAAGACTCCGGGT
AAGCTACTGATGCAGTCGGACCTTGATATGGCTTCTGGGTGGTTGTCTAAGCAGATCCAT
CATCTCGACCTTCTTTGCCGTTCCGGTGTGCTACGTCAGTCTACTGCTATTGTTCTCTCT
CACCCTTCGTCTAACTCTACCAAAGACGATTTAGTCCTTTATATTAGAGATGTGTTTACT
AGAATTCAGATCGGCGGAGTTGAGTTCAAGAGAAAGGCTTTGGAATCGTTGATTCAGCTG
CTCTCTGAGGATGAAAAATCAGCTGGTCTGGTTGCAAAAGAAGGACAAGTTGGGTACTTG
ATTAATTTACTTGACCTTAATACGGATCCTTCTATACGTGAACAGGCAGTTCTTGCTGTG
TCAATGCTTATTTCCATGAGCGAACAGGCAAGGAAATGCGTGTTTGAAGAGGGTGCTTTG
GGTCCTTTACTGAGAATCATTGAGTCTGGTTCGGTTACGATGAAGGAAAGAGCTGTCTTG
GCAGTGGAATGCATCACAAATGACCCTGATAATGCTTGGGCAATCTCAGCTTATGGTGGT
GTCCCTGTACTTCTGGACTTATGTAAATCTGGTTCGGTTGCTGCACAACTTCATGGTGTT
GGGGCTATCAAGAATGTTTCCACAAATGAAGATGTTCGAATTGCGTTAGCGGAAGAAGGT
GCAATTCCTGTTCTTTTACAGTTAATGGTTTCAGGCAAACCATCAGCACAAGAAAAGGCG
GCAAATTGCATTGCGATTCTTGCTTCATCTGGTGAGTACTATCGGGATTTGTTAATTCAA
GAAAAGGGGTTGCAGAGATTGGTTCATTTGCTTCATGAATCATCAAGTTCTGATACATTA
GAATATGTTTTACGGGCAATTCATTCGTTATCTTCTTCTGATTGTGCGTCAAGGATTCTT
TCATCATATACCACGTTTACTATTCAGTTGGCCGAGCTTATAAAGCATGGTAGCTTAATG
TTACAATACATTTCCGCCTCATTGCTTGCAAATGTAACAACCAGCGAAGAAAAGAAGAGG
GCTATTGCTGGGTGCATGGGGTCTTTGGTGAAGCTTATGGAATCAGCTAAACCAGATGGG
CTGCAAGAGGTGGCAGCTAATGCGTTAGTTTCACTGTTGGCTGTGAAGTCGAATAGGAAG
GAATTGGTTAAGGATGAGAAGAGTGTGATGAAGTTGGTCCAAATGTTGGATGCCAAGAAC
GATGCGATTTCGAAGAAGTTCCCAGTGGCAGTGGTGGCGGCAATCATGGCAGGAGGGAGC
CAGGGTTGTCGGAAGCGACTAGTGGAGGCCGGAGCATACGGCCATTTGCAGAAGCTGGTG
GAGGCGGAGGTTGCCGGGGCAAAAAAGGCCTTGCAAAGACTCTCAGGCAATAGGCTAAAG
AGCATTTTCACAAGGACATGGAGTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001308
PEP Infomation

pacid=37434387 transcript=PGSC0003DMT400001772 locus=PGSC0003DMG400000663 ID=PGSC0003DMT400001772.v4.03 annot-version=v4.03
Sequence

MHRTGEPPAQQPSKAQTLDQINQLLSHLLPFSLSVKSFTSRWQVLRSKLATVKSLLTEIS
DSPHWSENELLPTLLPNLLSTLLRVQTLCEECSDPAKTPGKLLMQSDLDMASGWLSKQIH
HLDLLCRSGVLRQSTAIVLSHPSSNSTKDDLVLYIRDVFTRIQIGGVEFKRKALESLIQL
LSEDEKSAGLVAKEGQVGYLINLLDLNTDPSIREQAVLAVSMLISMSEQARKCVFEEGAL
GPLLRIIESGSVTMKERAVLAVECITNDPDNAWAISAYGGVPVLLDLCKSGSVAAQLHGV
GAIKNVSTNEDVRIALAEEGAIPVLLQLMVSGKPSAQEKAANCIAILASSGEYYRDLLIQ
EKGLQRLVHLLHESSSSDTLEYVLRAIHSLSSSDCASRILSSYTTFTIQLAELIKHGSLM
LQYISASLLANVTTSEEKKRAIAGCMGSLVKLMESAKPDGLQEVAANALVSLLAVKSNRK
ELVKDEKSVMKLVQMLDAKNDAISKKFPVAVVAAIMAGGSQGCRKRLVEAGAYGHLQKLV
EAEVAGAKKALQRLSGNRLKSIFTRTWSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400001772
Transcript Infomation

pacid=37434387 locus=PGSC0003DMG400000663 ID=PGSC0003DMT400001772.v4.03 annot-version=v4.03
Sequence

ATGCATCGTACCGGCGAACCACCAGCTCAGCAGCCGTCTAAGGCACAAACCCTAGACCAA
ATCAACCAGCTTCTCTCTCATTTACTACCATTTTCTCTTTCTGTCAAGTCTTTTACTTCT
CGCTGGCAGGTGCTCCGGTCGAAGCTTGCTACTGTTAAGTCGCTTTTGACGGAAATATCT
GATTCTCCTCACTGGTCGGAAAATGAGCTGCTTCCGACCTTGCTGCCTAATCTTCTTTCC
ACTTTGCTTCGTGTTCAGACTCTATGTGAGGAGTGTTCTGACCCGGCGAAGACTCCGGGT
AAGCTACTGATGCAGTCGGACCTTGATATGGCTTCTGGGTGGTTGTCTAAGCAGATCCAT
CATCTCGACCTTCTTTGCCGTTCCGGTGTGCTACGTCAGTCTACTGCTATTGTTCTCTCT
CACCCTTCGTCTAACTCTACCAAAGACGATTTAGTCCTTTATATTAGAGATGTGTTTACT
AGAATTCAGATCGGCGGAGTTGAGTTCAAGAGAAAGGCTTTGGAATCGTTGATTCAGCTG
CTCTCTGAGGATGAAAAATCAGCTGGTCTGGTTGCAAAAGAAGGACAAGTTGGGTACTTG
ATTAATTTACTTGACCTTAATACGGATCCTTCTATACGTGAACAGGCAGTTCTTGCTGTG
TCAATGCTTATTTCCATGAGCGAACAGGCAAGGAAATGCGTGTTTGAAGAGGGTGCTTTG
GGTCCTTTACTGAGAATCATTGAGTCTGGTTCGGTTACGATGAAGGAAAGAGCTGTCTTG
GCAGTGGAATGCATCACAAATGACCCTGATAATGCTTGGGCAATCTCAGCTTATGGTGGT
GTCCCTGTACTTCTGGACTTATGTAAATCTGGTTCGGTTGCTGCACAACTTCATGGTGTT
GGGGCTATCAAGAATGTTTCCACAAATGAAGATGTTCGAATTGCGTTAGCGGAAGAAGGT
GCAATTCCTGTTCTTTTACAGTTAATGGTTTCAGGCAAACCATCAGCACAAGAAAAGGCG
GCAAATTGCATTGCGATTCTTGCTTCATCTGGTGAGTACTATCGGGATTTGTTAATTCAA
GAAAAGGGGTTGCAGAGATTGGTTCATTTGCTTCATGAATCATCAAGTTCTGATACATTA
GAATATGTTTTACGGGCAATTCATTCGTTATCTTCTTCTGATTGTGCGTCAAGGATTCTT
TCATCATATACCACGTTTACTATTCAGTTGGCCGAGCTTATAAAGCATGGTAGCTTAATG
TTACAATACATTTCCGCCTCATTGCTTGCAAATGTAACAACCAGCGAAGAAAAGAAGAGG
GCTATTGCTGGGTGCATGGGGTCTTTGGTGAAGCTTATGGAATCAGCTAAACCAGATGGG
CTGCAAGAGGTGGCAGCTAATGCGTTAGTTTCACTGTTGGCTGTGAAGTCGAATAGGAAG
GAATTGGTTAAGGATGAGAAGAGTGTGATGAAGTTGGTCCAAATGTTGGATGCCAAGAAC
GATGCGATTTCGAAGAAGTTCCCAGTGGCAGTGGTGGCGGCAATCATGGCAGGAGGGAGC
CAGGGTTGTCGGAAGCGACTAGTGGAGGCCGGAGCATACGGCCATTTGCAGAAGCTGGTG
GAGGCGGAGGTTGCCGGGGCAAAAAAGGCCTTGCAAAGACTCTCAGGCAATAGGCTAAAG
AGCATTTTCACAAGGACATGGAGTAATTAG