Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001712
CDS Infomation

pacid=37463487 polypeptide=PGSC0003DMP400001268 locus=PGSC0003DMG400000640 ID=PGSC0003DMT400001712.v4.03 annot-version=v4.03
Sequence

ATGAACGGAGACACATTTCATAATCGGAACAGTTCTTCCTCCACTCTCAGCAAAAGGAAC
AGCACTGAAAGGAAAGGTGACGTTACAGAAATGAAGAAGAAATCGGCATCGGCAACGGCA
ACGGCAACGGAGGTTGGTGGTTATGGGTGGTGGTTAGGTAATGCGTATTTCATGAAGTGG
AGGATGGAGGATGTATTCGGTGTAGTGAAGTACCATCCGATACCGTGTATCTTCGCTGCT
TCACTGTTGTTTTTCATGGGAGTGGAATATACTCTTCGTATGATTCCAGCTTCTGCTCCG
CCTTTCGATCTGGGATTTATTGTTACAGTTCCTCTTAATCGATTGCTTGCTGCTAAACCC
GCTCTCAACACTCTTTTTGCTGGACTAAACACGGTGTTTGTGGCGATGCAAACGGCGTAC
ATTTTGGGGACTTTTCTAATTGAAGGACGGCCTCGAGCGACAATATCGGCGCTGTTTATG
TTCACATTCAGAGGGATTCTCGGGTATGCTACACAATTGCCGTTGCCGGAGGATTTCTTG
GGGTCAGGGGTCGATTTCCCAGTAGGGAATGTGTCGTTTTTCTTGTTTTATTCAGGGCAT
GTTGCGGCCTCCGTTATTGCTTCGCTGGATATGAAACGTATGCAGAGATGGGAAATGGCT
AGAGTATTTGACGCATTGAATGTATTGCAAGTTGTGAGGTTGTTAAGCACTAGGGGCCAT
TACACTATTGATTTGGCTGTTGGCATTGGCGCTGGCATTTTGTTTGATTCTATGGCCGGA
AACTATGTGGAGACTAGGACAAAACTATCTGCTGCTAATGGTATTGGGGTGGAATACTCT
CCTAAGCATGAAAATGGAGTGAAATACCAAAGTGTTTCTTCAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001268
PEP Infomation

pacid=37463487 transcript=PGSC0003DMT400001712 locus=PGSC0003DMG400000640 ID=PGSC0003DMT400001712.v4.03 annot-version=v4.03
Sequence

MNGDTFHNRNSSSSTLSKRNSTERKGDVTEMKKKSASATATATEVGGYGWWLGNAYFMKW
RMEDVFGVVKYHPIPCIFAASLLFFMGVEYTLRMIPASAPPFDLGFIVTVPLNRLLAAKP
ALNTLFAGLNTVFVAMQTAYILGTFLIEGRPRATISALFMFTFRGILGYATQLPLPEDFL
GSGVDFPVGNVSFFLFYSGHVAASVIASLDMKRMQRWEMARVFDALNVLQVVRLLSTRGH
YTIDLAVGIGAGILFDSMAGNYVETRTKLSAANGIGVEYSPKHENGVKYQSVSSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400001712
Transcript Infomation

pacid=37463487 locus=PGSC0003DMG400000640 ID=PGSC0003DMT400001712.v4.03 annot-version=v4.03
Sequence

ATGAACGGAGACACATTTCATAATCGGAACAGTTCTTCCTCCACTCTCAGCAAAAGGAAC
AGCACTGAAAGGAAAGGTGACGTTACAGAAATGAAGAAGAAATCGGCATCGGCAACGGCA
ACGGCAACGGAGGTTGGTGGTTATGGGTGGTGGTTAGGTAATGCGTATTTCATGAAGTGG
AGGATGGAGGATGTATTCGGTGTAGTGAAGTACCATCCGATACCGTGTATCTTCGCTGCT
TCACTGTTGTTTTTCATGGGAGTGGAATATACTCTTCGTATGATTCCAGCTTCTGCTCCG
CCTTTCGATCTGGGATTTATTGTTACAGTTCCTCTTAATCGATTGCTTGCTGCTAAACCC
GCTCTCAACACTCTTTTTGCTGGACTAAACACGGTGTTTGTGGCGATGCAAACGGCGTAC
ATTTTGGGGACTTTTCTAATTGAAGGACGGCCTCGAGCGACAATATCGGCGCTGTTTATG
TTCACATTCAGAGGGATTCTCGGGTATGCTACACAATTGCCGTTGCCGGAGGATTTCTTG
GGGTCAGGGGTCGATTTCCCAGTAGGGAATGTGTCGTTTTTCTTGTTTTATTCAGGGCAT
GTTGCGGCCTCCGTTATTGCTTCGCTGGATATGAAACGTATGCAGAGATGGGAAATGGCT
AGAGTATTTGACGCATTGAATGTATTGCAAGTTGTGAGGTTGTTAAGCACTAGGGGCCAT
TACACTATTGATTTGGCTGTTGGCATTGGCGCTGGCATTTTGTTTGATTCTATGGCCGGA
AACTATGTGGAGACTAGGACAAAACTATCTGCTGCTAATGGTATTGGGGTGGAATACTCT
CCTAAGCATGAAAATGGAGTGAAATACCAAAGTGTTTCTTCAGATTAA