Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001665
CDS Infomation

pacid=37462662 polypeptide=PGSC0003DMP400001239 locus=PGSC0003DMG400000622 ID=PGSC0003DMT400001665.v4.03 annot-version=v4.03
Sequence

ATGAAGCGGCCTTCTTCTCTGCCCATATTGAAACAACTCAAAGGAACTCATCACGTAGAC
GTCAATTCTAACAAAGGAAAATCTATACTCGAAGATGAAGATGAATACGATGAGATCATC
GACTTCGAAAGAATCAGCACACCTGTAATTTGCAAAACAGTACAAAAATGGGAAGCCACC
ACACGAGGGGAAGAGTTTTCTTGCGGAAAACAGGGGCTATGGAGGCTTGAGCAGATAAAC
AGAGCAACCAGGCTAGAGAAACAGCTAAAAGCAAGATGGGCAGTCGATGGACTTATCGAA
GAAGAACTCAATCGCTTTCGAGCCCAATACAAAAGGTCTATAGTCCCAACAAGGCTCAAA
GATGTAGCTACATTGATCACGCCTAAATGGACTCCATCACCAGAGCTAGCCACATTGACT
TGGTTAGGCGATTGGCGGCCTTCAACAATCTTGGATCTTCTTCAATACTTAGCCCATTCA
TCTGGGCTTTCAAAATCTTTACCAGATTCAGTTGCAATTGAAGTGGCATTGCCCCAATTG
ATCAACGAGTTACGAATCGAGGAGGCGGTGATCGATGAAGAAATGGCTGAGATTCAGTCC
AATTGCATATTCTATCTCCCATTTGGCCCAAAGAAAGAGGCACATAAGGGTAAACCTGCA
ATGGCTTGTGTACAATCTGAGTTTAAGAAGATTCATAGGGTTATTACTAAGGCCCAAAAT
TTGAGGTTTAAGGCAATGGAAATGGCAGTGAAGAAGGTGTTAAGCAGAACAGATGCAGCA
GAGTTCTTGGTTGCTTTTGCTGGAATTCAAGATTTGGTTCATCAATGGGCTATGCAATAC
AAATTGCAGAAAGGCCCAGTTTCTATAAGTACTAAAGCCCTGAAGTCTGGTGGTAGCCCA
CTGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001239
PEP Infomation

pacid=37462662 transcript=PGSC0003DMT400001665 locus=PGSC0003DMG400000622 ID=PGSC0003DMT400001665.v4.03 annot-version=v4.03
Sequence

MKRPSSLPILKQLKGTHHVDVNSNKGKSILEDEDEYDEIIDFERISTPVICKTVQKWEAT
TRGEEFSCGKQGLWRLEQINRATRLEKQLKARWAVDGLIEEELNRFRAQYKRSIVPTRLK
DVATLITPKWTPSPELATLTWLGDWRPSTILDLLQYLAHSSGLSKSLPDSVAIEVALPQL
INELRIEEAVIDEEMAEIQSNCIFYLPFGPKKEAHKGKPAMACVQSEFKKIHRVITKAQN
LRFKAMEMAVKKVLSRTDAAEFLVAFAGIQDLVHQWAMQYKLQKGPVSISTKALKSGGSP
LK*

Transcript Sequence

Transcript ID

PGSC0003DMT400001665
Transcript Infomation

pacid=37462662 locus=PGSC0003DMG400000622 ID=PGSC0003DMT400001665.v4.03 annot-version=v4.03
Sequence

ATGAAGCGGCCTTCTTCTCTGCCCATATTGAAACAACTCAAAGGAACTCATCACGTAGAC
GTCAATTCTAACAAAGGAAAATCTATACTCGAAGATGAAGATGAATACGATGAGATCATC
GACTTCGAAAGAATCAGCACACCTGTAATTTGCAAAACAGTACAAAAATGGGAAGCCACC
ACACGAGGGGAAGAGTTTTCTTGCGGAAAACAGGGGCTATGGAGGCTTGAGCAGATAAAC
AGAGCAACCAGGCTAGAGAAACAGCTAAAAGCAAGATGGGCAGTCGATGGACTTATCGAA
GAAGAACTCAATCGCTTTCGAGCCCAATACAAAAGGTCTATAGTCCCAACAAGGCTCAAA
GATGTAGCTACATTGATCACGCCTAAATGGACTCCATCACCAGAGCTAGCCACATTGACT
TGGTTAGGCGATTGGCGGCCTTCAACAATCTTGGATCTTCTTCAATACTTAGCCCATTCA
TCTGGGCTTTCAAAATCTTTACCAGATTCAGTTGCAATTGAAGTGGCATTGCCCCAATTG
ATCAACGAGTTACGAATCGAGGAGGCGGTGATCGATGAAGAAATGGCTGAGATTCAGTCC
AATTGCATATTCTATCTCCCATTTGGCCCAAAGAAAGAGGCACATAAGGGTAAACCTGCA
ATGGCTTGTGTACAATCTGAGTTTAAGAAGATTCATAGGGTTATTACTAAGGCCCAAAAT
TTGAGGTTTAAGGCAATGGAAATGGCAGTGAAGAAGGTGTTAAGCAGAACAGATGCAGCA
GAGTTCTTGGTTGCTTTTGCTGGAATTCAAGATTTGGTTCATCAATGGGCTATGCAATAC
AAATTGCAGAAAGGCCCAGTTTCTATAAGTACTAAAGCCCTGAAGTCTGGTGGTAGCCCA
CTGAAGTAG