Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001651
CDS Infomation

pacid=37459513 polypeptide=PGSC0003DMP400001228 locus=PGSC0003DMG400000614 ID=PGSC0003DMT400001651.v4.03 annot-version=v4.03
Sequence

ATGGGCAAAGGAGCTTCTAGAATTTATGCCACAGTTGATTTGGAAAAGGCAAGGGTTGGA
AGAACCAGAGTTATTGAAAATGAACCAAACAATCCTAGGTGGTATGAGTCTTTCCACATC
TACTGTGCCCATATGGCTAAAAATGTTATATTTACTGTCAAAGATAACAATTCCATTGGT
GCAACCTTAATTGGAAGAGCTTATTTACCAGTTAATGACCTTTTGGAAGGGGAAGAGGTT
GATGAGTGGATTGAGATACTGGATGAAGACGAGAATCCCATTGAAGCAGGTTCTAAAATC
CATGTAACACTGCAGTATTTTGAAATCAGTCGTGATCGTAATTGGGGACGTGGAATAGGT
AGTTCTAAATATCCTGGTGTCCCTTATACTTTCTTCCCTCAGAGAACAGGATGTCGCGTT
TCTTTGTATCAAGATGCACATATCCCTGATAAGTTTATTCCGAAAATCCCTCTTTCAGGG
GGTAAATATTATGAACCACATCGATGTTGGGAAGATATCTTTGATGCTATTACTAATGCA
AAGCACATGATTTACATTACTGGTTGGTCAGTATATACTGAAATAACCTTGTTGAGAGAC
TCCAGGAGGGAAAAACCTGGAGGAGACGACTCAGTCGGAGAGCTGCTCAAGAAGAAGGCG
AAGGAAGGTGTTAAAGTCCTTATGCTTGTATGGGATGACAGAACATCTGTACGTCTGCTG
AAGAAAGACGGTCTCATGGCCACTCATGACGAAGAAACTGAAGAGTACTTTAAAGATACT
GATGTGCACTGTGTCCTTTGCCCTAGGGATCCTGATGATGGTGGAAGCATAGTTAAAGAT
TTACAGACTTCTGCAATGTTTACTCATCACCAGAAAATCGTAATAGTGGACACTGACATG
CCCAATGGAGAGTCAGAGACGAGGAGGCTTATGAGCTTCGTTGGTGGCCTTGATCTTTGT
GATGGGAGATATGATACTCCTTTCCATTCACTTTTTAGAACACTGGATACAGCACATCAT
GATGATTTCCACCAACCTAATTTTGCTGAAGCTTCGATTGACAAAGGAGGGCCTAGAGAG
CCCTGGCACGACATTCATTCTCGAGTTGAAGGACCAATTGCTTGGGATGTATTGTATAAT
TTTGAGCAGAGATGGAGAAAACAGGGCGGAAAAGACATTCTAGTGGACTTAAGAGAGCTT
GACAATGTTATCATTCCACCATCTTCAGTTATGTACCCTGATGATACTGAATCATGGAAT
GTTCAATTATTCAGATCGATTGATGGTGGGGCAGCTTTCGGCTTTCCTGATACACCAGAA
GAGTCAGTAAAGGCTGGTTTAGTGAGCGGGAAGAATAACATAGTCGATAGAAGTATCCAA
GATGCTTACATTACTGCTATTCGTCGGGCAAAGAATTTCATCTACATTGAAAATCAGTAT
TTTCTCGGAAGCTGTTACGATTGGGAGTGTGATGATGTGAAAGTGGAGGAGGTAGGTGCT
TTGCATCTCATTCCAAAAGAACTTACATTGAAGATTGTTAGTAAAATTGAAGCTGGAGAA
AGGTTTACTGTATATGTTCTGGTTCCAATGTGGCCAGAAGGACTTCCTGACAGTGCATCT
GTACAAGCAATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATAAACATATATTT
CAGGCTATCAGAGATCAAGGTCTCGACGATCACCCAAGGAATTATTTGACTTTTTTCTGT
ATTGGTAATCGAGAGGTGAAGAAGAGTGGAGAATATGAACCTTCAGACAAGCCTGAATCT
GATACTGATTATGAACGAGCTCAGGAAGCTCGTCGTTTCATGATCTATGTTCATTCCAAA
ATGATGATTGGTAAGTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001228
PEP Infomation

pacid=37459513 transcript=PGSC0003DMT400001651 locus=PGSC0003DMG400000614 ID=PGSC0003DMT400001651.v4.03 annot-version=v4.03
Sequence

MGKGASRIYATVDLEKARVGRTRVIENEPNNPRWYESFHIYCAHMAKNVIFTVKDNNSIG
ATLIGRAYLPVNDLLEGEEVDEWIEILDEDENPIEAGSKIHVTLQYFEISRDRNWGRGIG
SSKYPGVPYTFFPQRTGCRVSLYQDAHIPDKFIPKIPLSGGKYYEPHRCWEDIFDAITNA
KHMIYITGWSVYTEITLLRDSRREKPGGDDSVGELLKKKAKEGVKVLMLVWDDRTSVRLL
KKDGLMATHDEETEEYFKDTDVHCVLCPRDPDDGGSIVKDLQTSAMFTHHQKIVIVDTDM
PNGESETRRLMSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAEASIDKGGPRE
PWHDIHSRVEGPIAWDVLYNFEQRWRKQGGKDILVDLRELDNVIIPPSSVMYPDDTESWN
VQLFRSIDGGAAFGFPDTPEESVKAGLVSGKNNIVDRSIQDAYITAIRRAKNFIYIENQY
FLGSCYDWECDDVKVEEVGALHLIPKELTLKIVSKIEAGERFTVYVLVPMWPEGLPDSAS
VQAILDWQRRTMEMMYKHIFQAIRDQGLDDHPRNYLTFFCIGNREVKKSGEYEPSDKPES
DTDYERAQEARRFMIYVHSKMMIGKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400001651
Transcript Infomation

pacid=37459513 locus=PGSC0003DMG400000614 ID=PGSC0003DMT400001651.v4.03 annot-version=v4.03
Sequence

ATGGGCAAAGGAGCTTCTAGAATTTATGCCACAGTTGATTTGGAAAAGGCAAGGGTTGGA
AGAACCAGAGTTATTGAAAATGAACCAAACAATCCTAGGTGGTATGAGTCTTTCCACATC
TACTGTGCCCATATGGCTAAAAATGTTATATTTACTGTCAAAGATAACAATTCCATTGGT
GCAACCTTAATTGGAAGAGCTTATTTACCAGTTAATGACCTTTTGGAAGGGGAAGAGGTT
GATGAGTGGATTGAGATACTGGATGAAGACGAGAATCCCATTGAAGCAGGTTCTAAAATC
CATGTAACACTGCAGTATTTTGAAATCAGTCGTGATCGTAATTGGGGACGTGGAATAGGT
AGTTCTAAATATCCTGGTGTCCCTTATACTTTCTTCCCTCAGAGAACAGGATGTCGCGTT
TCTTTGTATCAAGATGCACATATCCCTGATAAGTTTATTCCGAAAATCCCTCTTTCAGGG
GGTAAATATTATGAACCACATCGATGTTGGGAAGATATCTTTGATGCTATTACTAATGCA
AAGCACATGATTTACATTACTGGTTGGTCAGTATATACTGAAATAACCTTGTTGAGAGAC
TCCAGGAGGGAAAAACCTGGAGGAGACGACTCAGTCGGAGAGCTGCTCAAGAAGAAGGCG
AAGGAAGGTGTTAAAGTCCTTATGCTTGTATGGGATGACAGAACATCTGTACGTCTGCTG
AAGAAAGACGGTCTCATGGCCACTCATGACGAAGAAACTGAAGAGTACTTTAAAGATACT
GATGTGCACTGTGTCCTTTGCCCTAGGGATCCTGATGATGGTGGAAGCATAGTTAAAGAT
TTACAGACTTCTGCAATGTTTACTCATCACCAGAAAATCGTAATAGTGGACACTGACATG
CCCAATGGAGAGTCAGAGACGAGGAGGCTTATGAGCTTCGTTGGTGGCCTTGATCTTTGT
GATGGGAGATATGATACTCCTTTCCATTCACTTTTTAGAACACTGGATACAGCACATCAT
GATGATTTCCACCAACCTAATTTTGCTGAAGCTTCGATTGACAAAGGAGGGCCTAGAGAG
CCCTGGCACGACATTCATTCTCGAGTTGAAGGACCAATTGCTTGGGATGTATTGTATAAT
TTTGAGCAGAGATGGAGAAAACAGGGCGGAAAAGACATTCTAGTGGACTTAAGAGAGCTT
GACAATGTTATCATTCCACCATCTTCAGTTATGTACCCTGATGATACTGAATCATGGAAT
GTTCAATTATTCAGATCGATTGATGGTGGGGCAGCTTTCGGCTTTCCTGATACACCAGAA
GAGTCAGTAAAGGCTGGTTTAGTGAGCGGGAAGAATAACATAGTCGATAGAAGTATCCAA
GATGCTTACATTACTGCTATTCGTCGGGCAAAGAATTTCATCTACATTGAAAATCAGTAT
TTTCTCGGAAGCTGTTACGATTGGGAGTGTGATGATGTGAAAGTGGAGGAGGTAGGTGCT
TTGCATCTCATTCCAAAAGAACTTACATTGAAGATTGTTAGTAAAATTGAAGCTGGAGAA
AGGTTTACTGTATATGTTCTGGTTCCAATGTGGCCAGAAGGACTTCCTGACAGTGCATCT
GTACAAGCAATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATAAACATATATTT
CAGGCTATCAGAGATCAAGGTCTCGACGATCACCCAAGGAATTATTTGACTTTTTTCTGT
ATTGGTAATCGAGAGGTGAAGAAGAGTGGAGAATATGAACCTTCAGACAAGCCTGAATCT
GATACTGATTATGAACGAGCTCAGGAAGCTCGTCGTTTCATGATCTATGTTCATTCCAAA
ATGATGATTGGTAAGTTGTAG