Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001624
CDS Infomation

pacid=37460400 polypeptide=PGSC0003DMP400001211 locus=PGSC0003DMG400000602 ID=PGSC0003DMT400001624.v4.03 annot-version=v4.03
Sequence

ATGGCGAGGGAGAAGCTAAAATCCCTAGTTACATCATTCACTACCGGCGGTGAATATCTC
GCCGTATTGTCTCCCGATGGAACTGTTAGAGTTTGGAACACAAGTAGTGGAAGCTTATTT
GGTCAGTGGAGACCGGAGAATTCTGGAGACAGTTTCTCTTACATGGCGTGCTGTATTATT
GGAAAGAAGCGCAGAAAAGAACAATGTCTATTAGTAGCTCTTGGCTCAGATGACGGAAGT
GTTTTAGCAGTTGACATTTCCGCTAAATTGGTAAGGTGGAGAAAAGATGGAGCCCTTCCT
AGCGGAGCTACTGGTCTGTTTTTTGTGGGCAAAGGTCGTAGGATTAATGCTGTTGCTGCG
AATGGTTTAGTACTTGAGATGAACTCCGAAACTGGAGAAGTCAACAAAGAGTTCAAAGTG
TCAAAGAAGCCCATTTCTTCAGTTGCTCATTCAACTGACGAGAAAATTATAGCTGTGGCC
AGTGATAAGTTGCGATTTCTAAGTCCAGAAAGCGGGAAAGAGTTGCTGAAGTTTTCTCCT
GATTCAGCTGCTGCACAACATATTTGGCTATCTGATGATGCCCAATTTGCTGTTACCGCT
GGGCTTGGCGAGAAACAACTTCAAGTGTGGAAACTTGATTTTGGGAAAAGGGCTGCAGAT
TATGGGCATGTTGTTTCCATGAAACATCCTCCTGTAATGGTTGAATGCAGGAATAATTGC
AAGGGAGTAGATTGTATGGTTATCCTTGCAACATCAGAGAAGGGTGTTTGTTATGTTTGG
AACTTTGAGTCCATCACTGATGAAGCTGCAAAGCCAATTAAGATCACAGTAAAATCCAGC
AAAGGGGAAACAGATGAGAGAGCTGGAAGAGCTAGAAGGAATCTTGTGCCCGTAATCGCT
GCAAGATTGCATGCTTTAGATAGAGATGCACATTTGAGAGCCTTGATTGCTTATGGCTCT
GTTGATACCCCAGAGTTTACATCAGTAGACATTTCAAGTCCAGGGGAGGATATCGTCATA
GCAGCAGGAGACCAGACCGAGAAAATGATTGCTTCAGTTCAAGAAAACGGCCATGCCAAA
AAAGGTGGAGATATGGAAGTTGAAGGTGCTAACTTAATCCAGAGAAGCAAAGTGACAAAC
AAACGACCAGCATCTGATCTGGATGTCACTGGTGAAGCGACTATTACGGATAATGGTAAT
GGTGAACCTATTGACGGAGTTCAGATTGATGATTTTAGCGAGCCAACCATGGGCGAGAAA
CTCATAATGCTCCATTTGGAAGACAATAATGAAGATAAAAGCAACAAGAATCTAGAATCT
GCTCTTCAAACGAAGCCTCCAAGTGCTGATTCAGTTCATGTATTGCTGAAGCAAGCACTT
CATGCTGATGATCGAGCACTTTTGATAGATTGCTTATACAGACAAGATGAGAAGGTCATT
GAAAATTCAGTCTCTCTTTTAAATCCTTCAGACGTTCTCAAGCTTTTACAGTCACTCTTG
TCAATTATCCAGTCAAGGGGTGCTGTATTGGCTTGTGCGCTTCCTTGGCTGCGAAGTTTG
CTTCTCCAACACGCCAGTGGAATAATGTCTCAAGAATCCTCTTTGCTTGCACTCAACTCT
TTATATCAGCTTATTGATGCGAGACTTTCAACTCTCCCCCAAGCTCTTCAGTTATCAAGT
TCCTTAGAATTGCTTTACGCAGGGACTATTGATGACGGTGATGATGAAGATGGTGCCATA
CAGCCCATCATATATGAAGATAACGATGACAGTGACGAGGAGGGTTCTGAAGTTACTATG
GAAACAGAAAGCATCCCAGATATTGAGGAACCCGAGGCTTTCAGCGACATTAGTGATCAC
GAAGGAAGTGATGGCATGAGCGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001211
PEP Infomation

pacid=37460400 transcript=PGSC0003DMT400001624 locus=PGSC0003DMG400000602 ID=PGSC0003DMT400001624.v4.03 annot-version=v4.03
Sequence

MAREKLKSLVTSFTTGGEYLAVLSPDGTVRVWNTSSGSLFGQWRPENSGDSFSYMACCII
GKKRRKEQCLLVALGSDDGSVLAVDISAKLVRWRKDGALPSGATGLFFVGKGRRINAVAA
NGLVLEMNSETGEVNKEFKVSKKPISSVAHSTDEKIIAVASDKLRFLSPESGKELLKFSP
DSAAAQHIWLSDDAQFAVTAGLGEKQLQVWKLDFGKRAADYGHVVSMKHPPVMVECRNNC
KGVDCMVILATSEKGVCYVWNFESITDEAAKPIKITVKSSKGETDERAGRARRNLVPVIA
ARLHALDRDAHLRALIAYGSVDTPEFTSVDISSPGEDIVIAAGDQTEKMIASVQENGHAK
KGGDMEVEGANLIQRSKVTNKRPASDLDVTGEATITDNGNGEPIDGVQIDDFSEPTMGEK
LIMLHLEDNNEDKSNKNLESALQTKPPSADSVHVLLKQALHADDRALLIDCLYRQDEKVI
ENSVSLLNPSDVLKLLQSLLSIIQSRGAVLACALPWLRSLLLQHASGIMSQESSLLALNS
LYQLIDARLSTLPQALQLSSSLELLYAGTIDDGDDEDGAIQPIIYEDNDDSDEEGSEVTM
ETESIPDIEEPEAFSDISDHEGSDGMSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400001624
Transcript Infomation

pacid=37460400 locus=PGSC0003DMG400000602 ID=PGSC0003DMT400001624.v4.03 annot-version=v4.03
Sequence

ATGGCGAGGGAGAAGCTAAAATCCCTAGTTACATCATTCACTACCGGCGGTGAATATCTC
GCCGTATTGTCTCCCGATGGAACTGTTAGAGTTTGGAACACAAGTAGTGGAAGCTTATTT
GGTCAGTGGAGACCGGAGAATTCTGGAGACAGTTTCTCTTACATGGCGTGCTGTATTATT
GGAAAGAAGCGCAGAAAAGAACAATGTCTATTAGTAGCTCTTGGCTCAGATGACGGAAGT
GTTTTAGCAGTTGACATTTCCGCTAAATTGGTAAGGTGGAGAAAAGATGGAGCCCTTCCT
AGCGGAGCTACTGGTCTGTTTTTTGTGGGCAAAGGTCGTAGGATTAATGCTGTTGCTGCG
AATGGTTTAGTACTTGAGATGAACTCCGAAACTGGAGAAGTCAACAAAGAGTTCAAAGTG
TCAAAGAAGCCCATTTCTTCAGTTGCTCATTCAACTGACGAGAAAATTATAGCTGTGGCC
AGTGATAAGTTGCGATTTCTAAGTCCAGAAAGCGGGAAAGAGTTGCTGAAGTTTTCTCCT
GATTCAGCTGCTGCACAACATATTTGGCTATCTGATGATGCCCAATTTGCTGTTACCGCT
GGGCTTGGCGAGAAACAACTTCAAGTGTGGAAACTTGATTTTGGGAAAAGGGCTGCAGAT
TATGGGCATGTTGTTTCCATGAAACATCCTCCTGTAATGGTTGAATGCAGGAATAATTGC
AAGGGAGTAGATTGTATGGTTATCCTTGCAACATCAGAGAAGGGTGTTTGTTATGTTTGG
AACTTTGAGTCCATCACTGATGAAGCTGCAAAGCCAATTAAGATCACAGTAAAATCCAGC
AAAGGGGAAACAGATGAGAGAGCTGGAAGAGCTAGAAGGAATCTTGTGCCCGTAATCGCT
GCAAGATTGCATGCTTTAGATAGAGATGCACATTTGAGAGCCTTGATTGCTTATGGCTCT
GTTGATACCCCAGAGTTTACATCAGTAGACATTTCAAGTCCAGGGGAGGATATCGTCATA
GCAGCAGGAGACCAGACCGAGAAAATGATTGCTTCAGTTCAAGAAAACGGCCATGCCAAA
AAAGGTGGAGATATGGAAGTTGAAGGTGCTAACTTAATCCAGAGAAGCAAAGTGACAAAC
AAACGACCAGCATCTGATCTGGATGTCACTGGTGAAGCGACTATTACGGATAATGGTAAT
GGTGAACCTATTGACGGAGTTCAGATTGATGATTTTAGCGAGCCAACCATGGGCGAGAAA
CTCATAATGCTCCATTTGGAAGACAATAATGAAGATAAAAGCAACAAGAATCTAGAATCT
GCTCTTCAAACGAAGCCTCCAAGTGCTGATTCAGTTCATGTATTGCTGAAGCAAGCACTT
CATGCTGATGATCGAGCACTTTTGATAGATTGCTTATACAGACAAGATGAGAAGGTCATT
GAAAATTCAGTCTCTCTTTTAAATCCTTCAGACGTTCTCAAGCTTTTACAGTCACTCTTG
TCAATTATCCAGTCAAGGGGTGCTGTATTGGCTTGTGCGCTTCCTTGGCTGCGAAGTTTG
CTTCTCCAACACGCCAGTGGAATAATGTCTCAAGAATCCTCTTTGCTTGCACTCAACTCT
TTATATCAGCTTATTGATGCGAGACTTTCAACTCTCCCCCAAGCTCTTCAGTTATCAAGT
TCCTTAGAATTGCTTTACGCAGGGACTATTGATGACGGTGATGATGAAGATGGTGCCATA
CAGCCCATCATATATGAAGATAACGATGACAGTGACGAGGAGGGTTCTGAAGTTACTATG
GAAACAGAAAGCATCCCAGATATTGAGGAACCCGAGGCTTTCAGCGACATTAGTGATCAC
GAAGGAAGTGATGGCATGAGCGAGTGA