Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001588
CDS Infomation

pacid=37460784 polypeptide=PGSC0003DMP400001184 locus=PGSC0003DMG400000587 ID=PGSC0003DMT400001588.v4.03 annot-version=v4.03
Sequence

ATGTCGACGCCCACCAAATCTTTTCCTCTTTCGCCTTCTCCTTCCTGTTTATCTCGGGCT
TTATCTCCCCCCATACGAACTCTCTTTCCTTCTGCGTTGCTCCCTTCTCAGAAACTCACA
TTTTCCCTACAGAAACAAGATAAACTACCTTTACACTTTCTGGTTCCTCAAGATTCCACG
CTTTTACTGCTCAAATGCAACGCCCTCGCCATCAACAACAGCTCTACAAATTCTTTCGTC
GATTCCGGGGTGATGCTATTTTCACTCTTTCGAGAAATTGGGTTCAATGAGACTGATACT
GAAGCTCTTTTGGACGCCCACCCAGCAATTAACCTGACGCCATTCGAATCCATACGCACG
CGAATTCATTCTTTGCAGTCCCTTGGGGTCAGCGGCCTTGCTCTTTCAAGATTGATTGTG
AAAAGACCAGATGTTTTAACAGCTGTGGAAATTGATGGCCTTGTTAGTTTTCTTCTCAAG
GGTGATTTGGAATTGGCTGGAAAAATCAAATCTTCACAGATTGAACATCTTTTGAACTCA
ACAGAACCAAGGTTTCTTGCAGGATTTGAAACAAAGGTTCGATTGTTACTCGAACTTGGG
ATTACCCAAGAAACGATTGTTCATGTTCTCAACAATGCCAACTTAACAAAGGCATTTTGT
CTCAAGTCATTTGAAGATATAGAAAGAATGCTTACTTTCTTGAACCGTTTTGGTGGTGGT
GATTTGATTCTTCGCCGACCAGCACTTCTCAATTATGACCTTGATGCCCAGTTGATTCCC
AGGGTAGGGTTCCTCTTGGAGCTGAGTGGAGGTGATGAGACTGGAACTGCAACCGTGTTG
CGTAAGTTGCCATTTGTTGTAGCATATAGCGTTGATCACTTAAAAGATCATGTAGAATTC
TTGAAATCATATGCTGGCTTAAGTGAGGAGGAGATTTTTCGAATTGTTTTAGTTTATCCC
AATATGTTTAGTGCCAGCAGGAAAAGGAAATTGCATCCTCGAATTGATTTTCTAAAGCAA
TGTGGGTTGAGTTCACATGATATATTCAGGTTCTTAATAAAAGCTCCTTTATTTCTGAGT
CTGTCATTTGAGGGGAATCTCGCTTACAAGCTGGTCTTTTTGGTGAAGATTGGGTATAAG
AAGAATACTAAGGAATTGGCTATGGCAATGGGAGCTGTAACCAGGACTAGCTGCAAAAAT
ATGCAAGAAGTTATTGGCGTATTTTTGAACTACGGCTTGACTTTTGATGACATTCTGGAG
ATGAGCATGAAACATCCGCAGGTATTACAGTACAATCATGAGTCACTGGAGGAGAAGATG
GACTACTTGGTTGAAGAGATGGGTCGTGAAGTTGGGGAGCTATTGGCTTTTCCTGCATTT
CTTGGGTACAAGCTTGACGGAAGGATTAAACACAGGTACGAAGAGAAAAGAAAGATCTTA
GGGGAAGGCATGTCGCTCAATAAACTTCTGAGTGTGTCTGCAGCAAGATTCTCAACAAAA
AGCAAGAGGAAGCAACGAGTTCCTGCCGTTAGTGGCCTCGATGAGAGTGATGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400001184
PEP Infomation

pacid=37460784 transcript=PGSC0003DMT400001588 locus=PGSC0003DMG400000587 ID=PGSC0003DMT400001588.v4.03 annot-version=v4.03
Sequence

MSTPTKSFPLSPSPSCLSRALSPPIRTLFPSALLPSQKLTFSLQKQDKLPLHFLVPQDST
LLLLKCNALAINNSSTNSFVDSGVMLFSLFREIGFNETDTEALLDAHPAINLTPFESIRT
RIHSLQSLGVSGLALSRLIVKRPDVLTAVEIDGLVSFLLKGDLELAGKIKSSQIEHLLNS
TEPRFLAGFETKVRLLLELGITQETIVHVLNNANLTKAFCLKSFEDIERMLTFLNRFGGG
DLILRRPALLNYDLDAQLIPRVGFLLELSGGDETGTATVLRKLPFVVAYSVDHLKDHVEF
LKSYAGLSEEEIFRIVLVYPNMFSASRKRKLHPRIDFLKQCGLSSHDIFRFLIKAPLFLS
LSFEGNLAYKLVFLVKIGYKKNTKELAMAMGAVTRTSCKNMQEVIGVFLNYGLTFDDILE
MSMKHPQVLQYNHESLEEKMDYLVEEMGREVGELLAFPAFLGYKLDGRIKHRYEEKRKIL
GEGMSLNKLLSVSAARFSTKSKRKQRVPAVSGLDESDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400001588
Transcript Infomation

pacid=37460784 locus=PGSC0003DMG400000587 ID=PGSC0003DMT400001588.v4.03 annot-version=v4.03
Sequence

ATGTCGACGCCCACCAAATCTTTTCCTCTTTCGCCTTCTCCTTCCTGTTTATCTCGGGCT
TTATCTCCCCCCATACGAACTCTCTTTCCTTCTGCGTTGCTCCCTTCTCAGAAACTCACA
TTTTCCCTACAGAAACAAGATAAACTACCTTTACACTTTCTGGTTCCTCAAGATTCCACG
CTTTTACTGCTCAAATGCAACGCCCTCGCCATCAACAACAGCTCTACAAATTCTTTCGTC
GATTCCGGGGTGATGCTATTTTCACTCTTTCGAGAAATTGGGTTCAATGAGACTGATACT
GAAGCTCTTTTGGACGCCCACCCAGCAATTAACCTGACGCCATTCGAATCCATACGCACG
CGAATTCATTCTTTGCAGTCCCTTGGGGTCAGCGGCCTTGCTCTTTCAAGATTGATTGTG
AAAAGACCAGATGTTTTAACAGCTGTGGAAATTGATGGCCTTGTTAGTTTTCTTCTCAAG
GGTGATTTGGAATTGGCTGGAAAAATCAAATCTTCACAGATTGAACATCTTTTGAACTCA
ACAGAACCAAGGTTTCTTGCAGGATTTGAAACAAAGGTTCGATTGTTACTCGAACTTGGG
ATTACCCAAGAAACGATTGTTCATGTTCTCAACAATGCCAACTTAACAAAGGCATTTTGT
CTCAAGTCATTTGAAGATATAGAAAGAATGCTTACTTTCTTGAACCGTTTTGGTGGTGGT
GATTTGATTCTTCGCCGACCAGCACTTCTCAATTATGACCTTGATGCCCAGTTGATTCCC
AGGGTAGGGTTCCTCTTGGAGCTGAGTGGAGGTGATGAGACTGGAACTGCAACCGTGTTG
CGTAAGTTGCCATTTGTTGTAGCATATAGCGTTGATCACTTAAAAGATCATGTAGAATTC
TTGAAATCATATGCTGGCTTAAGTGAGGAGGAGATTTTTCGAATTGTTTTAGTTTATCCC
AATATGTTTAGTGCCAGCAGGAAAAGGAAATTGCATCCTCGAATTGATTTTCTAAAGCAA
TGTGGGTTGAGTTCACATGATATATTCAGGTTCTTAATAAAAGCTCCTTTATTTCTGAGT
CTGTCATTTGAGGGGAATCTCGCTTACAAGCTGGTCTTTTTGGTGAAGATTGGGTATAAG
AAGAATACTAAGGAATTGGCTATGGCAATGGGAGCTGTAACCAGGACTAGCTGCAAAAAT
ATGCAAGAAGTTATTGGCGTATTTTTGAACTACGGCTTGACTTTTGATGACATTCTGGAG
ATGAGCATGAAACATCCGCAGGTATTACAGTACAATCATGAGTCACTGGAGGAGAAGATG
GACTACTTGGTTGAAGAGATGGGTCGTGAAGTTGGGGAGCTATTGGCTTTTCCTGCATTT
CTTGGGTACAAGCTTGACGGAAGGATTAAACACAGGTACGAAGAGAAAAGAAAGATCTTA
GGGGAAGGCATGTCGCTCAATAAACTTCTGAGTGTGTCTGCAGCAAGATTCTCAACAAAA
AGCAAGAGGAAGCAACGAGTTCCTGCCGTTAGTGGCCTCGATGAGAGTGATGAATGA