Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001565
CDS Infomation

pacid=37460075 polypeptide=PGSC0003DMP400001167 locus=PGSC0003DMG400000578 ID=PGSC0003DMT400001565.v4.03 annot-version=v4.03
Sequence

ATGGATTACTTCTTCTGGTTTTTCTTCTCGTTTGCCATACTAGTTAATAGTAATTTAGGT
TCGTTCGCGGACGGACCTTCAATTAACGTGACGAAGCATATCTCTTTTCGAGATTTCAGT
TCTAGTAATCCCAGATTGAAGCAAGATCTTACACTTCTCGGTAGTGTTATCGTCTCGGAT
GAAAAAAAATCCGTTCAAATTCCTGATCCTGAGCGAGAAGGTGATGATCTAAAGCATCTA
GCAGGACGAGCTATATATTCTTCACCTATCCGTTTCTTTGATCCTCGGACTCAAACACCG
GCTTCTTTTGAAACGACTTTCTCGTTTCAATTTGAAGTGAAGTCCAATTCAAGCAATGAG
ACGTCAGATCAGGGGAAATCTGTTGGTGGTAGTGGCCTTACTTTTATAATCGTTCCGGAT
GAATTGACTGTTGGCCGTGCTGGTCCGTGGCTTGGGATGCTGAACGATTTGTGCGATGAG
GATTATAAAACAGTAGCTATTGAGTTTGATACTCGGCAGAACCCTGAATTTGGTGACCCG
AATGATAATCACTTGGGCATTAATTTGGGTAGCATAGTATCAACTGCAGCGATTAATGCT
TCGGATGCCGGAGTTCAATTGAATGACGGATCAATTCACAGAGTTTGGATATCTTATGAT
GGGCGAAAGGGTTTTATTGAAATTCGTCTTGCACCTGATGGCAGAGGATATCCTTCTAAA
CCAGTTTACTCTGGTTTACTTGATCTTTCACCTTACTTGAATGAGTATATGTTTGTTGGA
TTTTCAGCTGCTACTGGTAACCATACACAAATCCACAACATCTTGTCATGGAATTTCACC
TCAATTAGTCAAGCTTCCCTTCGAATTCCTTCGACAGAGACGTGCCAGAACAAAATCATG
CTTCAAAATAGCACACAATCTGAAATTGATCATCGGAAAACGCCTAATAGTTTCTTTATT
TTCCTTGCTGTTGTCATTCTTCTGGTAATCGTTCTTATTAACCTCTATTTCAGTAGCTAC
AAGCGAGATGACAATTCCGACGAAGCATTCACTCTGCCCGAGAAAAAGCAGAGACCGCGG
CCACCAAACAAGGCACGTCGCTTCACAATAGCTGAGATCTCCATCGCAACAAGGAATTTC
AGCGAGTTACAAATATTAGGCAGTGATGAGAAGAGCATTACGTATAAGGCCACGATCCTG
AACGGGTGCAACGTTGTTGTAAAACGATTTTTAACTCAATTTTTCAACACACACGGGTTT
GAAAAGCGTCAATTTCACAAGGAAATCAAGGCTATCACCAGAATTCGTCACCCGAATTTG
GTCCCGATTAGAGGATGGTGCTATGACAACCAAGAAACAATAGTTGTGTACGATTTCATC
CCCAATGGAAGCCTCGATAAATGGCTGTTCGGCGTTGGAGTTTTGCCTTGGACGAGACGT
TTTAAGGTCGTTAAAGATTTAGCAGATTCTCTTGTCTACCTTCATTCAAAGCAACTCGCT
CACAAAAACGTTAAAAGTAGCAGCGTGTTTCTTGACGTGAGCTTCAGAGCAGTAGTGGGT
GATTTCGGGTTTGTGCTTACTTCAGCCGGGTCAACCCGGTTTGAGGCCATGGTGAGTCAG
ACAGCTGATGTGTTCGAATTCGGAGTAGTCGTGCTAGAGATCATTGCGGGTCGGAGCAGA
AAGTCCAACCCGGGAGAACGGGATTTGTTGGATCTTGCATGGGCAATGCATGAGGTACAA
CAGAAGGAAACTCTAGTGGATCGTAGAATGGGCGCGGTAGTGAACCTGGAGCAGGCGATT
CGGGCTTTGGATATCGGGTTGCTCTGCACGTTGAACGAGAACAAAGGAAGGCCTACGATG
GAAGAAGTTGTGGAGTTCCTAAATATGGAGAAACCGATACCGGAGTTGCCATCGGGTCGA
CCCGTTTGTTTGTTCCCGTACAGCAGCACCACAGGCTTATGCAGTGGGTATACTTGTACA
GCATTCAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400001167
PEP Infomation

pacid=37460075 transcript=PGSC0003DMT400001565 locus=PGSC0003DMG400000578 ID=PGSC0003DMT400001565.v4.03 annot-version=v4.03
Sequence

MDYFFWFFFSFAILVNSNLGSFADGPSINVTKHISFRDFSSSNPRLKQDLTLLGSVIVSD
EKKSVQIPDPEREGDDLKHLAGRAIYSSPIRFFDPRTQTPASFETTFSFQFEVKSNSSNE
TSDQGKSVGGSGLTFIIVPDELTVGRAGPWLGMLNDLCDEDYKTVAIEFDTRQNPEFGDP
NDNHLGINLGSIVSTAAINASDAGVQLNDGSIHRVWISYDGRKGFIEIRLAPDGRGYPSK
PVYSGLLDLSPYLNEYMFVGFSAATGNHTQIHNILSWNFTSISQASLRIPSTETCQNKIM
LQNSTQSEIDHRKTPNSFFIFLAVVILLVIVLINLYFSSYKRDDNSDEAFTLPEKKQRPR
PPNKARRFTIAEISIATRNFSELQILGSDEKSITYKATILNGCNVVVKRFLTQFFNTHGF
EKRQFHKEIKAITRIRHPNLVPIRGWCYDNQETIVVYDFIPNGSLDKWLFGVGVLPWTRR
FKVVKDLADSLVYLHSKQLAHKNVKSSSVFLDVSFRAVVGDFGFVLTSAGSTRFEAMVSQ
TADVFEFGVVVLEIIAGRSRKSNPGERDLLDLAWAMHEVQQKETLVDRRMGAVVNLEQAI
RALDIGLLCTLNENKGRPTMEEVVEFLNMEKPIPELPSGRPVCLFPYSSTTGLCSGYTCT
AFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400001565
Transcript Infomation

pacid=37460075 locus=PGSC0003DMG400000578 ID=PGSC0003DMT400001565.v4.03 annot-version=v4.03
Sequence

ATGGATTACTTCTTCTGGTTTTTCTTCTCGTTTGCCATACTAGTTAATAGTAATTTAGGT
TCGTTCGCGGACGGACCTTCAATTAACGTGACGAAGCATATCTCTTTTCGAGATTTCAGT
TCTAGTAATCCCAGATTGAAGCAAGATCTTACACTTCTCGGTAGTGTTATCGTCTCGGAT
GAAAAAAAATCCGTTCAAATTCCTGATCCTGAGCGAGAAGGTGATGATCTAAAGCATCTA
GCAGGACGAGCTATATATTCTTCACCTATCCGTTTCTTTGATCCTCGGACTCAAACACCG
GCTTCTTTTGAAACGACTTTCTCGTTTCAATTTGAAGTGAAGTCCAATTCAAGCAATGAG
ACGTCAGATCAGGGGAAATCTGTTGGTGGTAGTGGCCTTACTTTTATAATCGTTCCGGAT
GAATTGACTGTTGGCCGTGCTGGTCCGTGGCTTGGGATGCTGAACGATTTGTGCGATGAG
GATTATAAAACAGTAGCTATTGAGTTTGATACTCGGCAGAACCCTGAATTTGGTGACCCG
AATGATAATCACTTGGGCATTAATTTGGGTAGCATAGTATCAACTGCAGCGATTAATGCT
TCGGATGCCGGAGTTCAATTGAATGACGGATCAATTCACAGAGTTTGGATATCTTATGAT
GGGCGAAAGGGTTTTATTGAAATTCGTCTTGCACCTGATGGCAGAGGATATCCTTCTAAA
CCAGTTTACTCTGGTTTACTTGATCTTTCACCTTACTTGAATGAGTATATGTTTGTTGGA
TTTTCAGCTGCTACTGGTAACCATACACAAATCCACAACATCTTGTCATGGAATTTCACC
TCAATTAGTCAAGCTTCCCTTCGAATTCCTTCGACAGAGACGTGCCAGAACAAAATCATG
CTTCAAAATAGCACACAATCTGAAATTGATCATCGGAAAACGCCTAATAGTTTCTTTATT
TTCCTTGCTGTTGTCATTCTTCTGGTAATCGTTCTTATTAACCTCTATTTCAGTAGCTAC
AAGCGAGATGACAATTCCGACGAAGCATTCACTCTGCCCGAGAAAAAGCAGAGACCGCGG
CCACCAAACAAGGCACGTCGCTTCACAATAGCTGAGATCTCCATCGCAACAAGGAATTTC
AGCGAGTTACAAATATTAGGCAGTGATGAGAAGAGCATTACGTATAAGGCCACGATCCTG
AACGGGTGCAACGTTGTTGTAAAACGATTTTTAACTCAATTTTTCAACACACACGGGTTT
GAAAAGCGTCAATTTCACAAGGAAATCAAGGCTATCACCAGAATTCGTCACCCGAATTTG
GTCCCGATTAGAGGATGGTGCTATGACAACCAAGAAACAATAGTTGTGTACGATTTCATC
CCCAATGGAAGCCTCGATAAATGGCTGTTCGGCGTTGGAGTTTTGCCTTGGACGAGACGT
TTTAAGGTCGTTAAAGATTTAGCAGATTCTCTTGTCTACCTTCATTCAAAGCAACTCGCT
CACAAAAACGTTAAAAGTAGCAGCGTGTTTCTTGACGTGAGCTTCAGAGCAGTAGTGGGT
GATTTCGGGTTTGTGCTTACTTCAGCCGGGTCAACCCGGTTTGAGGCCATGGTGAGTCAG
ACAGCTGATGTGTTCGAATTCGGAGTAGTCGTGCTAGAGATCATTGCGGGTCGGAGCAGA
AAGTCCAACCCGGGAGAACGGGATTTGTTGGATCTTGCATGGGCAATGCATGAGGTACAA
CAGAAGGAAACTCTAGTGGATCGTAGAATGGGCGCGGTAGTGAACCTGGAGCAGGCGATT
CGGGCTTTGGATATCGGGTTGCTCTGCACGTTGAACGAGAACAAAGGAAGGCCTACGATG
GAAGAAGTTGTGGAGTTCCTAAATATGGAGAAACCGATACCGGAGTTGCCATCGGGTCGA
CCCGTTTGTTTGTTCCCGTACAGCAGCACCACAGGCTTATGCAGTGGGTATACTTGTACA
GCATTCAAATGA