Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001544
CDS Infomation

pacid=37462211 polypeptide=PGSC0003DMP400001151 locus=PGSC0003DMG400000573 ID=PGSC0003DMT400001544.v4.03 annot-version=v4.03
Sequence

ATGCTCACCATAACTTCCTGGAAAGAGCTTTCAATTACCTTGCTTTTCTGCGCGTTGATT
TCTCATTCGTTTGCCTCGACTTTCACCATTACTAACAACTGTCCGTATACAATATGGCCT
GGAACATTGTCTGGTTCCTCATCACCTCAACTTTCCACGACGGGCTTTCAATTGAATGCT
GGCCAAAGCGTCAGGATTCCAAGTGTCACAGGATGGTCAGGTCGCATTTGGGCAAGGACT
GGCTGCATTTTTGATGAGTCTGGTGTTGGCTCTTGTCAAACAGGGGACTGTGGTGGTAAG
CTTGAATGTGATGGCCTTGGTGCAACACCACCTGCCTCTCTCTTCGAGATAACTCTAGGG
ACGGGAGATACCAAAGATTTCTACGATGTCAGCATTGTTGATGGTTATAATCTACCAATG
GTTGCAACCCCACAGGGAGTTCCTGGTGGATGCAATGCCACTGGATGTGTTTCCAATCTT
AACATGGGTTGTCCCAAAGAACTTCAAGTGGTGGGTGGAGATGGAGGAGGAAATGTAGTA
GCATGCAAGAGTGCATGTGAGGCCTTTGGGTTAGATCAGTATTGTTGTGCCGGAGCGTTT
GCCAATCCAACAACTTGTCGTCCATCATTCTATTCAAGCATCTTCAAAAGAGCTTGTCCA
AGGGCTTATAGCTATGCATATGATGATGGCACCAGCACTTTTACCTGCAAGGCTTCCGAC
TACGCCATCATCTTCTGTCCCATGAAAGGGGTGAAGAGGCCCAACGGGGGAGAAATAACT
CCACCTGTTGAAGAAAGTAAAATGGAGAAGTTCCCAGGGATGACCTCATCATCAAACATT
CTCCTTCCTTTCCCCATGCTGATTGGGCTGCTATTTCAGTTTATATCTCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001151
PEP Infomation

pacid=37462211 transcript=PGSC0003DMT400001544 locus=PGSC0003DMG400000573 ID=PGSC0003DMT400001544.v4.03 annot-version=v4.03
Sequence

MLTITSWKELSITLLFCALISHSFASTFTITNNCPYTIWPGTLSGSSSPQLSTTGFQLNA
GQSVRIPSVTGWSGRIWARTGCIFDESGVGSCQTGDCGGKLECDGLGATPPASLFEITLG
TGDTKDFYDVSIVDGYNLPMVATPQGVPGGCNATGCVSNLNMGCPKELQVVGGDGGGNVV
ACKSACEAFGLDQYCCAGAFANPTTCRPSFYSSIFKRACPRAYSYAYDDGTSTFTCKASD
YAIIFCPMKGVKRPNGGEITPPVEESKMEKFPGMTSSSNILLPFPMLIGLLFQFISL*

Transcript Sequence

Transcript ID

PGSC0003DMT400001544
Transcript Infomation

pacid=37462211 locus=PGSC0003DMG400000573 ID=PGSC0003DMT400001544.v4.03 annot-version=v4.03
Sequence

ATGCTCACCATAACTTCCTGGAAAGAGCTTTCAATTACCTTGCTTTTCTGCGCGTTGATT
TCTCATTCGTTTGCCTCGACTTTCACCATTACTAACAACTGTCCGTATACAATATGGCCT
GGAACATTGTCTGGTTCCTCATCACCTCAACTTTCCACGACGGGCTTTCAATTGAATGCT
GGCCAAAGCGTCAGGATTCCAAGTGTCACAGGATGGTCAGGTCGCATTTGGGCAAGGACT
GGCTGCATTTTTGATGAGTCTGGTGTTGGCTCTTGTCAAACAGGGGACTGTGGTGGTAAG
CTTGAATGTGATGGCCTTGGTGCAACACCACCTGCCTCTCTCTTCGAGATAACTCTAGGG
ACGGGAGATACCAAAGATTTCTACGATGTCAGCATTGTTGATGGTTATAATCTACCAATG
GTTGCAACCCCACAGGGAGTTCCTGGTGGATGCAATGCCACTGGATGTGTTTCCAATCTT
AACATGGGTTGTCCCAAAGAACTTCAAGTGGTGGGTGGAGATGGAGGAGGAAATGTAGTA
GCATGCAAGAGTGCATGTGAGGCCTTTGGGTTAGATCAGTATTGTTGTGCCGGAGCGTTT
GCCAATCCAACAACTTGTCGTCCATCATTCTATTCAAGCATCTTCAAAAGAGCTTGTCCA
AGGGCTTATAGCTATGCATATGATGATGGCACCAGCACTTTTACCTGCAAGGCTTCCGAC
TACGCCATCATCTTCTGTCCCATGAAAGGGGTGAAGAGGCCCAACGGGGGAGAAATAACT
CCACCTGTTGAAGAAAGTAAAATGGAGAAGTTCCCAGGGATGACCTCATCATCAAACATT
CTCCTTCCTTTCCCCATGCTGATTGGGCTGCTATTTCAGTTTATATCTCTATAA