Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001518
CDS Infomation

pacid=37461155 polypeptide=PGSC0003DMP400001129 locus=PGSC0003DMG400000564 ID=PGSC0003DMT400001518.v4.03 annot-version=v4.03
Sequence

ATGGAAAGCTGGTTTATCATTGTCGTTACTCTTTGTATCGCTCTTTTGTTGAAATTTCTA
ATTAATACTACTATCATCTCCCCTAACTCCAGTTCCAAGAAGAAACTCCCGCCAGGACCC
TACAGTTTTCCGGTGATCGGTGGCGTACTATGGGCGATAAAGATTGCCATCAACATGCAA
TCCATACTCCGTGACCTCAAGGATAAGTATGGTCCTCTGATCACCATCAATACCGGGTCT
CGTCCCAACATATACGTAGCTAGCCACTCCTTAGCCTACCAAGCTTTAGTCCAGCAAGGT
GCTGTTTTCTCCGACCGACTAAGGGCTTTACCCACCCATGCTATCCTCAGTAGTAACCAG
CGCAGCATCAGCTCCGCCCCTTACGGCCCTATATGGCGTCTCCTCCGTCGAAACTTGACT
TCGGAAATGCTCAATCCTTCTCGCATCAAGTCCTATTCCAAGGCCAGATCGTCGGTACTG
GGTATCCTTCTTCAAAACCTCCGTCACGCCCAAGTCGATTCTGTGAAGTTAATTGATCAT
TTTCAGTATGCTATGTTCTGTCTACTTGTATTGATGTGTTTTGGGGATAAGCTTGAGGAA
TCTCAAATCAAAGATATTGAGAATATACAGCGTAAGTATATCGTGAATTACCGACGGTTC
TATATACTCAATTTCTTTCCTAGACTTGGGAAAATAATATTTAGGAATCGCTGGAAGGAA
CTCGTTGAACTACGACGAGAGCAAGAGAGTATCATCATTCCTTTGATTGAAGCACGAAAC
AGGAACAAAGAACAAAAGAAGGAGCAAAGTGATGAATTTGTGGTGGCTTATGTGGATACA
CTGTTGAATTTGGAGTTGCCGGAGGAAAACAGGAACCTCAATCTTGGAGAAATGGTAACC
CTCTGCCGTGAATTCCTAAGCGCCGGAACTGATACTACGTCCACTGCCTTACAGTGGATT
ATGGCCAATTTGGTCAAAAACCCTTCCATTCAGGAGAAACTATACCGAGAAATTGCGAGT
GTAGTGGGAGAAAAACAGAGCAAGTTGAGTACAGATGAAGAGGTGGTGAAGGAGGAAGAT
TTTCAGAAAATGCCCTACTTGAAAGCAGTGATATTGGAAGGTCTTAGGCGGCACCCACCC
AGTCACGTTCTGTTCCCACACACAGTGACGGAGGAAGTAGAACTAAACGGCTACACAGTT
CCAAAGAATGGCACCATCAATTTCATGGTCGCGGACATGGGATTGGACCCAAATGTATGG
GAGGATCCGATGGAGTTTAGGCCAGAGAGGTTCTTAGTTGAAGGATCAGATAAGGGAGTT
GATTTTGATATAACAGGAAGTAAAGAGATCAAGATGATGCCATTTGGTGCAGGGAGGAGA
ATGTGTCCTGCCTATGCGTTGGCAATGCTTCACTTGGAATACTTTGTGGCTAATTTGGTT
TGGCAGTTTCAATGGGATCCTGTCGAAGGAGATGATGTTGATCTCTCGGAGAAGCTAATA
TTCACCAGTGTGATGAAAAATCCATTACGAGCTCGTATTTTCCCCAGAGTTAACTCTGTT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400001129
PEP Infomation

pacid=37461155 transcript=PGSC0003DMT400001518 locus=PGSC0003DMG400000564 ID=PGSC0003DMT400001518.v4.03 annot-version=v4.03
Sequence

MESWFIIVVTLCIALLLKFLINTTIISPNSSSKKKLPPGPYSFPVIGGVLWAIKIAINMQ
SILRDLKDKYGPLITINTGSRPNIYVASHSLAYQALVQQGAVFSDRLRALPTHAILSSNQ
RSISSAPYGPIWRLLRRNLTSEMLNPSRIKSYSKARSSVLGILLQNLRHAQVDSVKLIDH
FQYAMFCLLVLMCFGDKLEESQIKDIENIQRKYIVNYRRFYILNFFPRLGKIIFRNRWKE
LVELRREQESIIIPLIEARNRNKEQKKEQSDEFVVAYVDTLLNLELPEENRNLNLGEMVT
LCREFLSAGTDTTSTALQWIMANLVKNPSIQEKLYREIASVVGEKQSKLSTDEEVVKEED
FQKMPYLKAVILEGLRRHPPSHVLFPHTVTEEVELNGYTVPKNGTINFMVADMGLDPNVW
EDPMEFRPERFLVEGSDKGVDFDITGSKEIKMMPFGAGRRMCPAYALAMLHLEYFVANLV
WQFQWDPVEGDDVDLSEKLIFTSVMKNPLRARIFPRVNSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400001518
Transcript Infomation

pacid=37461155 locus=PGSC0003DMG400000564 ID=PGSC0003DMT400001518.v4.03 annot-version=v4.03
Sequence

ATGGAAAGCTGGTTTATCATTGTCGTTACTCTTTGTATCGCTCTTTTGTTGAAATTTCTA
ATTAATACTACTATCATCTCCCCTAACTCCAGTTCCAAGAAGAAACTCCCGCCAGGACCC
TACAGTTTTCCGGTGATCGGTGGCGTACTATGGGCGATAAAGATTGCCATCAACATGCAA
TCCATACTCCGTGACCTCAAGGATAAGTATGGTCCTCTGATCACCATCAATACCGGGTCT
CGTCCCAACATATACGTAGCTAGCCACTCCTTAGCCTACCAAGCTTTAGTCCAGCAAGGT
GCTGTTTTCTCCGACCGACTAAGGGCTTTACCCACCCATGCTATCCTCAGTAGTAACCAG
CGCAGCATCAGCTCCGCCCCTTACGGCCCTATATGGCGTCTCCTCCGTCGAAACTTGACT
TCGGAAATGCTCAATCCTTCTCGCATCAAGTCCTATTCCAAGGCCAGATCGTCGGTACTG
GGTATCCTTCTTCAAAACCTCCGTCACGCCCAAGTCGATTCTGTGAAGTTAATTGATCAT
TTTCAGTATGCTATGTTCTGTCTACTTGTATTGATGTGTTTTGGGGATAAGCTTGAGGAA
TCTCAAATCAAAGATATTGAGAATATACAGCGTAAGTATATCGTGAATTACCGACGGTTC
TATATACTCAATTTCTTTCCTAGACTTGGGAAAATAATATTTAGGAATCGCTGGAAGGAA
CTCGTTGAACTACGACGAGAGCAAGAGAGTATCATCATTCCTTTGATTGAAGCACGAAAC
AGGAACAAAGAACAAAAGAAGGAGCAAAGTGATGAATTTGTGGTGGCTTATGTGGATACA
CTGTTGAATTTGGAGTTGCCGGAGGAAAACAGGAACCTCAATCTTGGAGAAATGGTAACC
CTCTGCCGTGAATTCCTAAGCGCCGGAACTGATACTACGTCCACTGCCTTACAGTGGATT
ATGGCCAATTTGGTCAAAAACCCTTCCATTCAGGAGAAACTATACCGAGAAATTGCGAGT
GTAGTGGGAGAAAAACAGAGCAAGTTGAGTACAGATGAAGAGGTGGTGAAGGAGGAAGAT
TTTCAGAAAATGCCCTACTTGAAAGCAGTGATATTGGAAGGTCTTAGGCGGCACCCACCC
AGTCACGTTCTGTTCCCACACACAGTGACGGAGGAAGTAGAACTAAACGGCTACACAGTT
CCAAAGAATGGCACCATCAATTTCATGGTCGCGGACATGGGATTGGACCCAAATGTATGG
GAGGATCCGATGGAGTTTAGGCCAGAGAGGTTCTTAGTTGAAGGATCAGATAAGGGAGTT
GATTTTGATATAACAGGAAGTAAAGAGATCAAGATGATGCCATTTGGTGCAGGGAGGAGA
ATGTGTCCTGCCTATGCGTTGGCAATGCTTCACTTGGAATACTTTGTGGCTAATTTGGTT
TGGCAGTTTCAATGGGATCCTGTCGAAGGAGATGATGTTGATCTCTCGGAGAAGCTAATA
TTCACCAGTGTGATGAAAAATCCATTACGAGCTCGTATTTTCCCCAGAGTTAACTCTGTT
TGA