Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001508
CDS Infomation

pacid=37462213 polypeptide=PGSC0003DMP400001121 locus=PGSC0003DMG400000558 ID=PGSC0003DMT400001508.v4.03 annot-version=v4.03
Sequence

ATGATGGGTTTAGGGTCTTTCGGTAATGGGGGTTCGTCATCATCCTTCTCCAATTTATCA
CCTTTAGCTCCACCTTTTACTGTTGATCGGACCAATTCCAAAACGGGTTCAACCCAATTG
TTGAATTTCAGTGATTCATCTTATACCGGTACAGTACCATTTGGACAGTCATGGCAGTAT
GGTGCTGCTAACCCATCACCCACTGGATACAATTTTTTCCCTTCAGTTACTGATTCTGTG
CCCACAACTTGTAATATGCCTTTATCACCTGAGTTTTCCCCTGCTGATTCAGTTGAACCC
GGTAGTCACTTTTGGTCAACTTCAAACCCAACTGTTCATGCTTCGACTGACACCTATTCG
TTTGGCCGTGAGGGATATTATGCCCCTTATGTCCCTTCCATAGTGAGCAATGAACACCCA
TCGGCGGCGTTCAATGAACCTTCGCTTGATGTTTTGCCTAATTCTGGTAGTATTCATGTT
GATGCATCCTCGCAAGTTGATTATACCCAGAGCTTGTCTGGTTTGGAATACCCACATTGG
AGTTTTTTTAGTAAAGTGGCTGATGGGAAGCAAGATGAGAGGAATGGAGTTGATGGAAGT
TTTTCCTTGGGGAATGTTAATGCTGGTGCTTCATATGGTTACAGGAATTGCATGTCTCAA
GGTAATTCACTTGAAGGTGTGAACATAGCTAGAGAAGATTCTGGTGCTGGAAATTTTATT
GATGGAGTATATACTGGGCCTTCAAGTATGGGACATATGGATGCCAAATCATATCTCACT
CAAGAACCAATCTACCAGTCTCTTAACTCAGAAACAGCTATGGGTTCAATTCTCCCCGTG
TCTTGCCAAGTGGGTCTTTCTTTAGGGTCTTCTAATAATTACTTGAACTATGAAAACCCT
TTTACTCCACATGAGAAATTCTTCCAACCCCTTGATTCTTGTCCCCGTGATACTACATCC
ACATCAAAATCTTCTCCTGTAGTGGTTATCAGACCAGCACCTTCTGGAAGCCGTTTCTTT
GCACCAAAGATAGACTTGCACAAAAATGTGGATATTTGCAAAACTGGAGCTACAAACAGT
GAGAAATCAGATGTCTGTGACCTGTTAAAGAGTCAGGAAACTCGGCTACCAATAGATTCT
CCGATCAAAGAGTTTTCCTTGGGCTCAAGCACACCGCTGGACTTTGACAAGATCAAAAAC
ATTTTTTTTGCATCGTCGTCAGTTAACAATCTGTGCTCGACCCGTCCTTGTAGCAGCAAT
AGCATAGAGATTGCAGTTAAAGAAAGATCTGGATCTCAAGCTCCTTGCGCTAGTGCACCA
CCTGTGACTTTTGCTGAGAAATGTTCAGATGCTCTAGATCTTCATAACCCAAATGTAGAT
TCACCCTGCTGGAAAGGTGCTCCTGCTTTTCGTATTTCTCTCGGCGACTCTGTTGACGCT
TCAAGCCCGTGCCTCTTCACAAGCAAAGTAGAATTCGCTGATTTTAGTCAAAGCAATCCT
TTATTTCCTCCAGCAGAATATTCAGGGAAAACTTCCTTAAAAAAACTTGGTGAGGAAAAT
CTGCATAACCATAATGTATATGCTGGAAATGGTCTGTCTGTTCCTTCGGTAGGCACTGGT
ACTAATAACTACACCACAGAAGAACTCAGGACCATTGATGTCACAAAAGAAACATTTGTG
CCTATGGATCTGTCCAGCAATGGTGGGATACCTAAATTTTCTGAAGATCTGAATAAGCCT
AGCAAAGGATATAGTCTACCTCAGTACTCGGAAAATGATTGTCAACTACAATATTCCTGG
GGCAAGCACCTTAGTGTTGATGGCCACCAATATGGACCCAAAAAGCATAATTTGCCTGAA
GGTTATATGCATACTGGTTTGAGCCTCAATGACACATTAGAGGGTGGAGTAGTTGCACTA
GATGCTGCAGAAAATGTTTTACGTTCACCAGCTTCTCAAGAAGATGCCAAGCAGGCCCAA
CAATATCAAATGGGATCAAGTCCAAAGCTGGATGTTCAAACACTTGTGCATGCAATTCAT
AACCTTTCGGAACTACTTAAATCTCAATGCTTGGCTAATGCATGTCTACTGGAGGGTCAA
GACATTGACACCCTTAAGAGTGCAATTACCAATCTGGGTGCATGTACTGCTAAGAAGATT
GAAACAAAAGATACAATGGTTTCCCAGCATGACACTTTCGAAAAGTTCGAAGAATCTCGC
CGCTCTTTTATGGGCACTGAGACAGGCCACCCTCAGTTTATGGAAGAAGTTGCTTGGGAT
TCTTGTGGCCTCGATAATCAGCCCACGCCTGAAGATAAGAGCAAGAACAATGGTAAGAAA
ACTGAGAATTCAGCCCTTCTAACTCCTGCAGATGACTTGGGGGATTCAAATGAAGAACAA
GTGGTCCAGGCTATAAAGAAAGTCCTCAATGAGAACTTTCTCTCTGATGAAGGAATGCAA
CCCCAAGCCCTTCTTTTCAAGAATTTATGGCTTGAAGCTGAAGCAAAGTTATGTTCTTTA
AGCTATAAATCTCGTTTTGACCGTATGAAGATTGAAATGGAGAAGCATAGATTCAGCCAA
GAGTTAAACCTGAATTCCTCAGTGGCACCTGAAGCTGAAAATGACTCAGCGTCAAAGATT
ACCACTCAGAGTCCCTCTACTTCAAGCAAAAGTGTCCACATTGATGATTCTGTAATGGAG
AGATTCAATATTTTAAATAGAAGGGAAGAGAAGCTGAGTTCATCATTCATGAAAGAGGAA
AATGATTCTGTTAAGGTTGGCAGTGATTCTGAGGATTCTGTTACAATGAGACTAAATATC
CTAAGGAAACAGGGAAACAACTCCAGTTCATCATTCATGCAAGAGAAAAAAGCTTCTGAT
ATAGTTTCCAGTGACACTGAGGATTCTGTTATGGAAAGATTCAACATCTTAAGACGACGG
GAAGACAACTTGAAATCATCTTTCATGGGAGAGAAAAAGGATCAGGATGTGGTTGCCAAT
GATGCTGAGGATTCTGTTAAGGTGAGACTCAACATCTTAAGACAGCGGGAAGACAACTTG
AATTCATCTTTCACAGAGGAGACAAAGGATCCAGATATGGTCACTAATGATGCTGAGGAT
TCTGTTATGGCAAGATTCAATGTATTAACACACCGGGGAGACAACCTGAATTCACCGTTT
ATGGAGGTTAAAAAAGATCTGGACATGGTGGCTGCTGGTTCTGCAGATATGGAGAATCAT
GGATTGATAAATGGAGAAGTATCAGGCTATCAGAGAGCAAATGTGGTCATAGAACCTTAC
TTTTATCATCACAGTATTAATTCCAGTGAAGGATATAACTCCTTTGGGTCTTATGCTGAT
GGTTCTGGATATGACTCCATGAAACAGTTTCTTCTCTCTGTCGCGGATGATCCAATTGTC
CATTCAAATAGGAAGGCCAGACTGGGAAATCACCACTCATCAGGTTTGTATGATAATTCT
TCATCAGATTGGGAGCATGTTGCCAAGGATGAGTATGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001121
PEP Infomation

pacid=37462213 transcript=PGSC0003DMT400001508 locus=PGSC0003DMG400000558 ID=PGSC0003DMT400001508.v4.03 annot-version=v4.03
Sequence

MMGLGSFGNGGSSSSFSNLSPLAPPFTVDRTNSKTGSTQLLNFSDSSYTGTVPFGQSWQY
GAANPSPTGYNFFPSVTDSVPTTCNMPLSPEFSPADSVEPGSHFWSTSNPTVHASTDTYS
FGREGYYAPYVPSIVSNEHPSAAFNEPSLDVLPNSGSIHVDASSQVDYTQSLSGLEYPHW
SFFSKVADGKQDERNGVDGSFSLGNVNAGASYGYRNCMSQGNSLEGVNIAREDSGAGNFI
DGVYTGPSSMGHMDAKSYLTQEPIYQSLNSETAMGSILPVSCQVGLSLGSSNNYLNYENP
FTPHEKFFQPLDSCPRDTTSTSKSSPVVVIRPAPSGSRFFAPKIDLHKNVDICKTGATNS
EKSDVCDLLKSQETRLPIDSPIKEFSLGSSTPLDFDKIKNIFFASSSVNNLCSTRPCSSN
SIEIAVKERSGSQAPCASAPPVTFAEKCSDALDLHNPNVDSPCWKGAPAFRISLGDSVDA
SSPCLFTSKVEFADFSQSNPLFPPAEYSGKTSLKKLGEENLHNHNVYAGNGLSVPSVGTG
TNNYTTEELRTIDVTKETFVPMDLSSNGGIPKFSEDLNKPSKGYSLPQYSENDCQLQYSW
GKHLSVDGHQYGPKKHNLPEGYMHTGLSLNDTLEGGVVALDAAENVLRSPASQEDAKQAQ
QYQMGSSPKLDVQTLVHAIHNLSELLKSQCLANACLLEGQDIDTLKSAITNLGACTAKKI
ETKDTMVSQHDTFEKFEESRRSFMGTETGHPQFMEEVAWDSCGLDNQPTPEDKSKNNGKK
TENSALLTPADDLGDSNEEQVVQAIKKVLNENFLSDEGMQPQALLFKNLWLEAEAKLCSL
SYKSRFDRMKIEMEKHRFSQELNLNSSVAPEAENDSASKITTQSPSTSSKSVHIDDSVME
RFNILNRREEKLSSSFMKEENDSVKVGSDSEDSVTMRLNILRKQGNNSSSSFMQEKKASD
IVSSDTEDSVMERFNILRRREDNLKSSFMGEKKDQDVVANDAEDSVKVRLNILRQREDNL
NSSFTEETKDPDMVTNDAEDSVMARFNVLTHRGDNLNSPFMEVKKDLDMVAAGSADMENH
GLINGEVSGYQRANVVIEPYFYHHSINSSEGYNSFGSYADGSGYDSMKQFLLSVADDPIV
HSNRKARLGNHHSSGLYDNSSSDWEHVAKDEYV*

Transcript Sequence

Transcript ID

PGSC0003DMT400001508
Transcript Infomation

pacid=37462213 locus=PGSC0003DMG400000558 ID=PGSC0003DMT400001508.v4.03 annot-version=v4.03
Sequence

ATGATGGGTTTAGGGTCTTTCGGTAATGGGGGTTCGTCATCATCCTTCTCCAATTTATCA
CCTTTAGCTCCACCTTTTACTGTTGATCGGACCAATTCCAAAACGGGTTCAACCCAATTG
TTGAATTTCAGTGATTCATCTTATACCGGTACAGTACCATTTGGACAGTCATGGCAGTAT
GGTGCTGCTAACCCATCACCCACTGGATACAATTTTTTCCCTTCAGTTACTGATTCTGTG
CCCACAACTTGTAATATGCCTTTATCACCTGAGTTTTCCCCTGCTGATTCAGTTGAACCC
GGTAGTCACTTTTGGTCAACTTCAAACCCAACTGTTCATGCTTCGACTGACACCTATTCG
TTTGGCCGTGAGGGATATTATGCCCCTTATGTCCCTTCCATAGTGAGCAATGAACACCCA
TCGGCGGCGTTCAATGAACCTTCGCTTGATGTTTTGCCTAATTCTGGTAGTATTCATGTT
GATGCATCCTCGCAAGTTGATTATACCCAGAGCTTGTCTGGTTTGGAATACCCACATTGG
AGTTTTTTTAGTAAAGTGGCTGATGGGAAGCAAGATGAGAGGAATGGAGTTGATGGAAGT
TTTTCCTTGGGGAATGTTAATGCTGGTGCTTCATATGGTTACAGGAATTGCATGTCTCAA
GGTAATTCACTTGAAGGTGTGAACATAGCTAGAGAAGATTCTGGTGCTGGAAATTTTATT
GATGGAGTATATACTGGGCCTTCAAGTATGGGACATATGGATGCCAAATCATATCTCACT
CAAGAACCAATCTACCAGTCTCTTAACTCAGAAACAGCTATGGGTTCAATTCTCCCCGTG
TCTTGCCAAGTGGGTCTTTCTTTAGGGTCTTCTAATAATTACTTGAACTATGAAAACCCT
TTTACTCCACATGAGAAATTCTTCCAACCCCTTGATTCTTGTCCCCGTGATACTACATCC
ACATCAAAATCTTCTCCTGTAGTGGTTATCAGACCAGCACCTTCTGGAAGCCGTTTCTTT
GCACCAAAGATAGACTTGCACAAAAATGTGGATATTTGCAAAACTGGAGCTACAAACAGT
GAGAAATCAGATGTCTGTGACCTGTTAAAGAGTCAGGAAACTCGGCTACCAATAGATTCT
CCGATCAAAGAGTTTTCCTTGGGCTCAAGCACACCGCTGGACTTTGACAAGATCAAAAAC
ATTTTTTTTGCATCGTCGTCAGTTAACAATCTGTGCTCGACCCGTCCTTGTAGCAGCAAT
AGCATAGAGATTGCAGTTAAAGAAAGATCTGGATCTCAAGCTCCTTGCGCTAGTGCACCA
CCTGTGACTTTTGCTGAGAAATGTTCAGATGCTCTAGATCTTCATAACCCAAATGTAGAT
TCACCCTGCTGGAAAGGTGCTCCTGCTTTTCGTATTTCTCTCGGCGACTCTGTTGACGCT
TCAAGCCCGTGCCTCTTCACAAGCAAAGTAGAATTCGCTGATTTTAGTCAAAGCAATCCT
TTATTTCCTCCAGCAGAATATTCAGGGAAAACTTCCTTAAAAAAACTTGGTGAGGAAAAT
CTGCATAACCATAATGTATATGCTGGAAATGGTCTGTCTGTTCCTTCGGTAGGCACTGGT
ACTAATAACTACACCACAGAAGAACTCAGGACCATTGATGTCACAAAAGAAACATTTGTG
CCTATGGATCTGTCCAGCAATGGTGGGATACCTAAATTTTCTGAAGATCTGAATAAGCCT
AGCAAAGGATATAGTCTACCTCAGTACTCGGAAAATGATTGTCAACTACAATATTCCTGG
GGCAAGCACCTTAGTGTTGATGGCCACCAATATGGACCCAAAAAGCATAATTTGCCTGAA
GGTTATATGCATACTGGTTTGAGCCTCAATGACACATTAGAGGGTGGAGTAGTTGCACTA
GATGCTGCAGAAAATGTTTTACGTTCACCAGCTTCTCAAGAAGATGCCAAGCAGGCCCAA
CAATATCAAATGGGATCAAGTCCAAAGCTGGATGTTCAAACACTTGTGCATGCAATTCAT
AACCTTTCGGAACTACTTAAATCTCAATGCTTGGCTAATGCATGTCTACTGGAGGGTCAA
GACATTGACACCCTTAAGAGTGCAATTACCAATCTGGGTGCATGTACTGCTAAGAAGATT
GAAACAAAAGATACAATGGTTTCCCAGCATGACACTTTCGAAAAGTTCGAAGAATCTCGC
CGCTCTTTTATGGGCACTGAGACAGGCCACCCTCAGTTTATGGAAGAAGTTGCTTGGGAT
TCTTGTGGCCTCGATAATCAGCCCACGCCTGAAGATAAGAGCAAGAACAATGGTAAGAAA
ACTGAGAATTCAGCCCTTCTAACTCCTGCAGATGACTTGGGGGATTCAAATGAAGAACAA
GTGGTCCAGGCTATAAAGAAAGTCCTCAATGAGAACTTTCTCTCTGATGAAGGAATGCAA
CCCCAAGCCCTTCTTTTCAAGAATTTATGGCTTGAAGCTGAAGCAAAGTTATGTTCTTTA
AGCTATAAATCTCGTTTTGACCGTATGAAGATTGAAATGGAGAAGCATAGATTCAGCCAA
GAGTTAAACCTGAATTCCTCAGTGGCACCTGAAGCTGAAAATGACTCAGCGTCAAAGATT
ACCACTCAGAGTCCCTCTACTTCAAGCAAAAGTGTCCACATTGATGATTCTGTAATGGAG
AGATTCAATATTTTAAATAGAAGGGAAGAGAAGCTGAGTTCATCATTCATGAAAGAGGAA
AATGATTCTGTTAAGGTTGGCAGTGATTCTGAGGATTCTGTTACAATGAGACTAAATATC
CTAAGGAAACAGGGAAACAACTCCAGTTCATCATTCATGCAAGAGAAAAAAGCTTCTGAT
ATAGTTTCCAGTGACACTGAGGATTCTGTTATGGAAAGATTCAACATCTTAAGACGACGG
GAAGACAACTTGAAATCATCTTTCATGGGAGAGAAAAAGGATCAGGATGTGGTTGCCAAT
GATGCTGAGGATTCTGTTAAGGTGAGACTCAACATCTTAAGACAGCGGGAAGACAACTTG
AATTCATCTTTCACAGAGGAGACAAAGGATCCAGATATGGTCACTAATGATGCTGAGGAT
TCTGTTATGGCAAGATTCAATGTATTAACACACCGGGGAGACAACCTGAATTCACCGTTT
ATGGAGGTTAAAAAAGATCTGGACATGGTGGCTGCTGGTTCTGCAGATATGGAGAATCAT
GGATTGATAAATGGAGAAGTATCAGGCTATCAGAGAGCAAATGTGGTCATAGAACCTTAC
TTTTATCATCACAGTATTAATTCCAGTGAAGGATATAACTCCTTTGGGTCTTATGCTGAT
GGTTCTGGATATGACTCCATGAAACAGTTTCTTCTCTCTGTCGCGGATGATCCAATTGTC
CATTCAAATAGGAAGGCCAGACTGGGAAATCACCACTCATCAGGTTTGTATGATAATTCT
TCATCAGATTGGGAGCATGTTGCCAAGGATGAGTATGTTTGA