Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001498
CDS Infomation

pacid=37460489 polypeptide=PGSC0003DMP400001114 locus=PGSC0003DMG400000555 ID=PGSC0003DMT400001498.v4.03 annot-version=v4.03
Sequence

ATGGCCGTACTTCCTGGAGAAAATCCGATCGCCGTACTTCCGGTGGATAAACAGATGGGT
ATACCGCCGCTGAATACTCTGCCGGTGGGATACCGTTTCCGGCCGACAGATGAGGAGTTA
GTGAATCATTATCTGAGGTTGAAGATAAACGGTGCTGATAGTCAGGTCAGCGTTATTCGA
GAAGTTGATATCTGTAAACTCGAGCCTTGGGACTTACCTGATTTGTCTGTGGTAGAGTCA
CATGACAACGAGTGGTTCTTCTTCTGCCCAAAGGATCGTAAGTATCAAAATGGGCAGCGA
CTGAACCGAGCAACAGAACGAGGCTACTGGAAAGCCACTGGTAAAGATAGGAACATTGTT
ACTAAGAAGGGCGCAAAAATTGGGATGAAGAAGACCTTGGTATACTACATTGGTCGAGCT
CCTGAAGGCAAGAGGACTCATTGGGTGATTCATGAATATCGTGCAACTGAAAAGTCATTG
GATGGATCACACCCTGGCCAGGGTGCCTTTGTGCTTTGTCGTCTGTTTAGGAAGAATGAT
TTGAAGCAGGATGAGCATGTTGAAAATTCCAATTTAGATGCTGAACAGAATGCTTCAGTT
GACAAATCACCTGCTGAAGATGAATTATCAGAGGCAGCCACTCCATTAATGGTCATACAA
CCTTTAAGTGATTGTGATAAAAGCTATGCTGCAAAGTTTTCCAAAGGCGAGATGTATGGC
AAACAAATACCCATTGAGAGTCACAGCAACAGCTGTATTGCTGATGATACTGAAGATCAA
ATGTTGGACATAACATCCATACCGCCGGTTCAAGATCTAGAAAAGGAGTTGGGAAATTTT
TATGACCCGTCATCACAGCCAGATTGGAAGATCTTCTCCCCATTGCACTCACAGATGCAG
GTGGAGCTTGGATCGTCTTATTTGCAAGCCCCCTTTAATAATGACATCTGTGGTTATCAA
AAAGATGTCCAGTTTCCGTATGGAACAAATGCTCTTGAGATTAATGACTTTTTGAACTCG
ATACTCGTCAACTCAGATGAGCTCTCATGTGAAGATTCTGGACAAGAATTGGCTTCACAT
CATATTGACACAAAAAATTACAGCATAACTGGCCCGATGATTAAGGACTCTGGATCATGT
AGTGAGTCAGAAGCAGAAGTTACCCAAGGGCAGGTTGATCCAGGCTTCTTTGATCCTGAG
GTGCTGTGGGACAATTTTGATCGAGAGGCTGCAGTTAAGAGAGAGGTTAATTCCCTTGAA
CATACAGTGCTAAAGGCGCGTAGTCCACTAGGTCCATCTTATGATGGCAATGATTATGCT
GTAGGAAATCTAGGTTTCTTTCAAAATACCTACCCTGGACATTATGGTTATCCTGCTAGT
ATTGGTGGAAGTCAGGTCCCGAACTTCCTAAAAGTAGAACAGTCCGGTGTTCGCAATAAT
GTAGTAAGCACTGAATCTGGCTCAGGAACTGGAATAAAACTCAGGACCAGGCAAATGCAT
AATCAACCTGATGACACGCAGTCTAGACCACAAGGAACTGCTCACAGAAGAATACGTTTA
GGAGTGAAAATGCAAGTTGGGCCAGTTGAGTGTCGCATGCGCTCTGTTTCTAGTCAGGGG
GCAGAAATTCATCAAGCAGTGGCTGAGGGTGAGAAAGCCTGTGATGAACATAGTTCTACC
ACCAGTGATAATACAACACATAAAGATCTTGAGGGAGTTGTTGGGGAAACTGATGAATTG
AGCACTCGAGTGAAAGATGCAGATGATTCTCCAGTTCAAGAAAGTCTTGATGTGTCTTTG
AAGACCGCTACAAAGCTCTCAAGTTCATCACACGTTTACATGTCCAAGGTTCTTGTGGTT
GCAAGTCTGCTTGTGGTCTTTATTGGTGTTTGGGGTTGCTTTAGACTGTGTGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001114
PEP Infomation

pacid=37460489 transcript=PGSC0003DMT400001498 locus=PGSC0003DMG400000555 ID=PGSC0003DMT400001498.v4.03 annot-version=v4.03
Sequence

MAVLPGENPIAVLPVDKQMGIPPLNTLPVGYRFRPTDEELVNHYLRLKINGADSQVSVIR
EVDICKLEPWDLPDLSVVESHDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRNIV
TKKGAKIGMKKTLVYYIGRAPEGKRTHWVIHEYRATEKSLDGSHPGQGAFVLCRLFRKND
LKQDEHVENSNLDAEQNASVDKSPAEDELSEAATPLMVIQPLSDCDKSYAAKFSKGEMYG
KQIPIESHSNSCIADDTEDQMLDITSIPPVQDLEKELGNFYDPSSQPDWKIFSPLHSQMQ
VELGSSYLQAPFNNDICGYQKDVQFPYGTNALEINDFLNSILVNSDELSCEDSGQELASH
HIDTKNYSITGPMIKDSGSCSESEAEVTQGQVDPGFFDPEVLWDNFDREAAVKREVNSLE
HTVLKARSPLGPSYDGNDYAVGNLGFFQNTYPGHYGYPASIGGSQVPNFLKVEQSGVRNN
VVSTESGSGTGIKLRTRQMHNQPDDTQSRPQGTAHRRIRLGVKMQVGPVECRMRSVSSQG
AEIHQAVAEGEKACDEHSSTTSDNTTHKDLEGVVGETDELSTRVKDADDSPVQESLDVSL
KTATKLSSSSHVYMSKVLVVASLLVVFIGVWGCFRLCV*

Transcript Sequence

Transcript ID

PGSC0003DMT400001498
Transcript Infomation

pacid=37460489 locus=PGSC0003DMG400000555 ID=PGSC0003DMT400001498.v4.03 annot-version=v4.03
Sequence

ATGGCCGTACTTCCTGGAGAAAATCCGATCGCCGTACTTCCGGTGGATAAACAGATGGGT
ATACCGCCGCTGAATACTCTGCCGGTGGGATACCGTTTCCGGCCGACAGATGAGGAGTTA
GTGAATCATTATCTGAGGTTGAAGATAAACGGTGCTGATAGTCAGGTCAGCGTTATTCGA
GAAGTTGATATCTGTAAACTCGAGCCTTGGGACTTACCTGATTTGTCTGTGGTAGAGTCA
CATGACAACGAGTGGTTCTTCTTCTGCCCAAAGGATCGTAAGTATCAAAATGGGCAGCGA
CTGAACCGAGCAACAGAACGAGGCTACTGGAAAGCCACTGGTAAAGATAGGAACATTGTT
ACTAAGAAGGGCGCAAAAATTGGGATGAAGAAGACCTTGGTATACTACATTGGTCGAGCT
CCTGAAGGCAAGAGGACTCATTGGGTGATTCATGAATATCGTGCAACTGAAAAGTCATTG
GATGGATCACACCCTGGCCAGGGTGCCTTTGTGCTTTGTCGTCTGTTTAGGAAGAATGAT
TTGAAGCAGGATGAGCATGTTGAAAATTCCAATTTAGATGCTGAACAGAATGCTTCAGTT
GACAAATCACCTGCTGAAGATGAATTATCAGAGGCAGCCACTCCATTAATGGTCATACAA
CCTTTAAGTGATTGTGATAAAAGCTATGCTGCAAAGTTTTCCAAAGGCGAGATGTATGGC
AAACAAATACCCATTGAGAGTCACAGCAACAGCTGTATTGCTGATGATACTGAAGATCAA
ATGTTGGACATAACATCCATACCGCCGGTTCAAGATCTAGAAAAGGAGTTGGGAAATTTT
TATGACCCGTCATCACAGCCAGATTGGAAGATCTTCTCCCCATTGCACTCACAGATGCAG
GTGGAGCTTGGATCGTCTTATTTGCAAGCCCCCTTTAATAATGACATCTGTGGTTATCAA
AAAGATGTCCAGTTTCCGTATGGAACAAATGCTCTTGAGATTAATGACTTTTTGAACTCG
ATACTCGTCAACTCAGATGAGCTCTCATGTGAAGATTCTGGACAAGAATTGGCTTCACAT
CATATTGACACAAAAAATTACAGCATAACTGGCCCGATGATTAAGGACTCTGGATCATGT
AGTGAGTCAGAAGCAGAAGTTACCCAAGGGCAGGTTGATCCAGGCTTCTTTGATCCTGAG
GTGCTGTGGGACAATTTTGATCGAGAGGCTGCAGTTAAGAGAGAGGTTAATTCCCTTGAA
CATACAGTGCTAAAGGCGCGTAGTCCACTAGGTCCATCTTATGATGGCAATGATTATGCT
GTAGGAAATCTAGGTTTCTTTCAAAATACCTACCCTGGACATTATGGTTATCCTGCTAGT
ATTGGTGGAAGTCAGGTCCCGAACTTCCTAAAAGTAGAACAGTCCGGTGTTCGCAATAAT
GTAGTAAGCACTGAATCTGGCTCAGGAACTGGAATAAAACTCAGGACCAGGCAAATGCAT
AATCAACCTGATGACACGCAGTCTAGACCACAAGGAACTGCTCACAGAAGAATACGTTTA
GGAGTGAAAATGCAAGTTGGGCCAGTTGAGTGTCGCATGCGCTCTGTTTCTAGTCAGGGG
GCAGAAATTCATCAAGCAGTGGCTGAGGGTGAGAAAGCCTGTGATGAACATAGTTCTACC
ACCAGTGATAATACAACACATAAAGATCTTGAGGGAGTTGTTGGGGAAACTGATGAATTG
AGCACTCGAGTGAAAGATGCAGATGATTCTCCAGTTCAAGAAAGTCTTGATGTGTCTTTG
AAGACCGCTACAAAGCTCTCAAGTTCATCACACGTTTACATGTCCAAGGTTCTTGTGGTT
GCAAGTCTGCTTGTGGTCTTTATTGGTGTTTGGGGTTGCTTTAGACTGTGTGTGTAG