Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001478
CDS Infomation

pacid=37462909 polypeptide=PGSC0003DMP400001101 locus=PGSC0003DMG400000548 ID=PGSC0003DMT400001478.v4.03 annot-version=v4.03
Sequence

ATGGCTGATTCTAGAGAAGAATCTCCAGATTGGCTCCGCAGTTTTCAGGCACCTGCTGCG
ATAACCTTGTCATCCGGATCTGAATCTCCTGTAAATAACAACCATCTAAGTGATGATGAG
GATAGCATCAATCTGAGTAAGCTGTTTCAGAAGGATAAAACATCACTTTCAGAGGACAAA
AGTAGTCAGGATGGGCATGGATCTCAACTCCCAAAGACATCTGAAGTAAATTCTCCGATT
AAAAATGAAAAAGTAGATCGCACACCTACTAGGAAGAGAAAGAAGGAAAACCAGAGTGAA
AAAAAAGGAAAAGGCACTGACAAGGCTTTAACGAAGAGAAGAGCATTGGAGAAACCTTTT
ACAGATAAAGAACCCAGTCATTCAGTGTGTACGTTGTCATCAGATTCTGAGTCTCCTCAT
GATGGCAGTTCCATGAAAGTGGAGGAAGTCCTTGACAAAGAGTTGCTTATGCACGATGCT
AAGGCTACAAAGAAAGAAGAAAATGATGTAATCTCTAAGCAAAAATCTCCTAAGAAAAAA
ATGAAGAAAGAGGAACAGGAAAAGAAGATAAAACTAGAGAATCAGCTGAATGAAGGTATA
GAGAAGGAAGCCATGGAGGAAAATATTCCAGAGAAACAAAGCGGAACAAATTTGTCATCT
TCAAGGCTGCCTTTGGTTCTTCCCGAGAAAGTACAGAGGACAAAGGCACTTGTGGAGTGT
GAAGGTGATTCCGTAGATCTGAGTGGTGATGTGGGTGCTGTCGGGAGGATAATCGTTTCG
GATGGTCCATCAGGAAACCATGAGATGCTTCTCGATTTGAAAGGAACCATTTATAAAACG
ACGATATTGCCTTCCAGGACGTTTTGTGTGGTAAGCTTTGGACCATCAGAAGCAAAGGTG
GAGGCCATCATGAATGACTTCATACAGCTGAAGTCACAATCAAATGTTTATGATGCTGAA
ACCATGATTGAAGGGACTCTAGATGGTTTCACATTTGATTCGGATGAGGAGGCTGAAAAT
TTGACGCGACCAGCTTCCCAAGGTGACCAGAATGAGAATGTTGATCATCAGACCAATGGG
AATGTCAAAACAAAAGCTAAGAAAGCCTCGGCTATGGAACAAAAGAAGGGCAAGAAGGGA
GCAAAGATACCAAAGAAAGTAAAAAAGAAACCTCTAGTGCAGAAGAAAAGCAAGAGCAAA
AAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001101
PEP Infomation

pacid=37462909 transcript=PGSC0003DMT400001478 locus=PGSC0003DMG400000548 ID=PGSC0003DMT400001478.v4.03 annot-version=v4.03
Sequence

MADSREESPDWLRSFQAPAAITLSSGSESPVNNNHLSDDEDSINLSKLFQKDKTSLSEDK
SSQDGHGSQLPKTSEVNSPIKNEKVDRTPTRKRKKENQSEKKGKGTDKALTKRRALEKPF
TDKEPSHSVCTLSSDSESPHDGSSMKVEEVLDKELLMHDAKATKKEENDVISKQKSPKKK
MKKEEQEKKIKLENQLNEGIEKEAMEENIPEKQSGTNLSSSRLPLVLPEKVQRTKALVEC
EGDSVDLSGDVGAVGRIIVSDGPSGNHEMLLDLKGTIYKTTILPSRTFCVVSFGPSEAKV
EAIMNDFIQLKSQSNVYDAETMIEGTLDGFTFDSDEEAENLTRPASQGDQNENVDHQTNG
NVKTKAKKASAMEQKKGKKGAKIPKKVKKKPLVQKKSKSKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400001478
Transcript Infomation

pacid=37462909 locus=PGSC0003DMG400000548 ID=PGSC0003DMT400001478.v4.03 annot-version=v4.03
Sequence

ATGGCTGATTCTAGAGAAGAATCTCCAGATTGGCTCCGCAGTTTTCAGGCACCTGCTGCG
ATAACCTTGTCATCCGGATCTGAATCTCCTGTAAATAACAACCATCTAAGTGATGATGAG
GATAGCATCAATCTGAGTAAGCTGTTTCAGAAGGATAAAACATCACTTTCAGAGGACAAA
AGTAGTCAGGATGGGCATGGATCTCAACTCCCAAAGACATCTGAAGTAAATTCTCCGATT
AAAAATGAAAAAGTAGATCGCACACCTACTAGGAAGAGAAAGAAGGAAAACCAGAGTGAA
AAAAAAGGAAAAGGCACTGACAAGGCTTTAACGAAGAGAAGAGCATTGGAGAAACCTTTT
ACAGATAAAGAACCCAGTCATTCAGTGTGTACGTTGTCATCAGATTCTGAGTCTCCTCAT
GATGGCAGTTCCATGAAAGTGGAGGAAGTCCTTGACAAAGAGTTGCTTATGCACGATGCT
AAGGCTACAAAGAAAGAAGAAAATGATGTAATCTCTAAGCAAAAATCTCCTAAGAAAAAA
ATGAAGAAAGAGGAACAGGAAAAGAAGATAAAACTAGAGAATCAGCTGAATGAAGGTATA
GAGAAGGAAGCCATGGAGGAAAATATTCCAGAGAAACAAAGCGGAACAAATTTGTCATCT
TCAAGGCTGCCTTTGGTTCTTCCCGAGAAAGTACAGAGGACAAAGGCACTTGTGGAGTGT
GAAGGTGATTCCGTAGATCTGAGTGGTGATGTGGGTGCTGTCGGGAGGATAATCGTTTCG
GATGGTCCATCAGGAAACCATGAGATGCTTCTCGATTTGAAAGGAACCATTTATAAAACG
ACGATATTGCCTTCCAGGACGTTTTGTGTGGTAAGCTTTGGACCATCAGAAGCAAAGGTG
GAGGCCATCATGAATGACTTCATACAGCTGAAGTCACAATCAAATGTTTATGATGCTGAA
ACCATGATTGAAGGGACTCTAGATGGTTTCACATTTGATTCGGATGAGGAGGCTGAAAAT
TTGACGCGACCAGCTTCCCAAGGTGACCAGAATGAGAATGTTGATCATCAGACCAATGGG
AATGTCAAAACAAAAGCTAAGAAAGCCTCGGCTATGGAACAAAAGAAGGGCAAGAAGGGA
GCAAAGATACCAAAGAAAGTAAAAAAGAAACCTCTAGTGCAGAAGAAAAGCAAGAGCAAA
AAATAA