Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001472
CDS Infomation

pacid=37459807 polypeptide=PGSC0003DMP400001095 locus=PGSC0003DMG400000543 ID=PGSC0003DMT400001472.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGGCAATGCATATCTGGGTTCATTGAAGCAGAGCTTCCATGAAACAAGCAAA
GAAAGATTGTTACTACTCAGAAAAGGCTATTCAGACTTGAGTGTAGGTGGTGGTGGTAGT
TCTTTTACTGGGAACGAGACCTTTCTAGAACGTATTCGTTATCGAGTTTCTGAGTACTGT
AACAATGTCAAACAAGCTGCAAGTAAAGCAGTTAAAATGGGTCGTAGTGATCCGAGGAAG
ATTATCTTTTCTGCTAAAGTGGGTTTTGCTCTTGCCCTTGTTTCGATTCTCATTTTCTTC
AAAGAACCCATACCCTATATTGGTAGCCACTCCATTTGGGCGATTCTTACTGTTGTCGTC
GTTTTTGAATTCAGCATAGGTGCAACGCTTAACAAAGGATTTAACAGGGCTTTGGGGACA
TTTTCTGCTGGAGGATTAGCTTTGGGCATTGCTGAACTGTCTCTTATGGCTGGAGGATTT
CGAGAGATTTTGATTGTGATCAGTGTATTTATTGCAGGATTTTGCGCAACTTATATGAAA
TTGTATCCTCCACTGAAGGAATATGAATATGGATTCCGGGTTTTCTTATTGACATATTGT
ATAGTGCTAGTATCGGGGACTTCGGATTTTGTAAAGACAGCTGTTTCTCGATTGTTACTT
ATTGGGGTTGGAGCTGCTGTTTGTTTGGTTATAAATATATGCATCTTCCCTATTTGGGCT
GGTGAAGATTTGCACAAATTGGTGGTGAAAAACTTTAAGGGTGTCGCTACTTCTTTGGAA
GGTTGTGTCAAAGACTATTTGCAATGTCTTGAATACGATAGGATACCATCAAAAATTCTT
CTTTACCAGGCATCTGATGATCCTATCTACAGTGGTTACAGGACTGCTGTAGAGTCCACC
AGCCAAGAAGCTTCTCTGTTAGCTTTTGCTGTGTGGGAACCCCCTCATGGACGATACAGA
ATGCTCAATTATCCTTGGGGTGAATATACTAGAGTCAGTGGTGCACTACGACACTGTGCT
TTCATGATAATGGCAATGCATGGATGTATTCTTTCGGAAATACAGGCAGCATCTGAATTG
AGGCGGACTTTTATGAAGGAGATTCAGAGAGTTGGGACTGAAGGAGCTAAAGTGATACGA
CTGCTTGGGGAGAAAGTTGAAAAGATGGAGAAACTAAGCCCCGGAGATCCTCTCAAAGAT
GTTCATGAAGCTGCTGAGGATCTCCAATTGTTGATTGACCAAAAATCTTATCTTTTGGTT
AATGCAGAGAATTGGGAAAGTTCAAAAAGACCTAAGAAGTTTGAAGATCCTGAACGCCTA
CAAGAACTTAAGGACAATGAACCTAAACCAATGGTAATTAACTCCCTTAGTGAAGCTACT
CTCCATCTAAGGTCTGCTCACACATTGAAACACATGGATACTCTTAATCCAAATGTAAGT
GTCAACTTTTCTACTTCACAATGGGGTTCCTCAGCAGATGTATTCACGCAGCAGACAATG
TGGCCTTCACGTCTTTCACTCATTGGAGATGTGATTTTAAACGAACGTGAAGTACGGACT
TTTGAAAGTGCTAGTACATTATCACTGTCAACATTTACATCCTTGTTGATTGAGTTTGTT
GCAAGACTTCAGAATCTTCTACATGCATTTCAAGAGCTCAGTGAAAAGGCAAAATTTAAG
GAACCTGTAGATACTAAAGAGGCAACTACTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001095
PEP Infomation

pacid=37459807 transcript=PGSC0003DMT400001472 locus=PGSC0003DMG400000543 ID=PGSC0003DMT400001472.v4.03 annot-version=v4.03
Sequence

MAAGNAYLGSLKQSFHETSKERLLLLRKGYSDLSVGGGGSSFTGNETFLERIRYRVSEYC
NNVKQAASKAVKMGRSDPRKIIFSAKVGFALALVSILIFFKEPIPYIGSHSIWAILTVVV
VFEFSIGATLNKGFNRALGTFSAGGLALGIAELSLMAGGFREILIVISVFIAGFCATYMK
LYPPLKEYEYGFRVFLLTYCIVLVSGTSDFVKTAVSRLLLIGVGAAVCLVINICIFPIWA
GEDLHKLVVKNFKGVATSLEGCVKDYLQCLEYDRIPSKILLYQASDDPIYSGYRTAVEST
SQEASLLAFAVWEPPHGRYRMLNYPWGEYTRVSGALRHCAFMIMAMHGCILSEIQAASEL
RRTFMKEIQRVGTEGAKVIRLLGEKVEKMEKLSPGDPLKDVHEAAEDLQLLIDQKSYLLV
NAENWESSKRPKKFEDPERLQELKDNEPKPMVINSLSEATLHLRSAHTLKHMDTLNPNVS
VNFSTSQWGSSADVFTQQTMWPSRLSLIGDVILNEREVRTFESASTLSLSTFTSLLIEFV
ARLQNLLHAFQELSEKAKFKEPVDTKEATTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400001472
Transcript Infomation

pacid=37459807 locus=PGSC0003DMG400000543 ID=PGSC0003DMT400001472.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGGCAATGCATATCTGGGTTCATTGAAGCAGAGCTTCCATGAAACAAGCAAA
GAAAGATTGTTACTACTCAGAAAAGGCTATTCAGACTTGAGTGTAGGTGGTGGTGGTAGT
TCTTTTACTGGGAACGAGACCTTTCTAGAACGTATTCGTTATCGAGTTTCTGAGTACTGT
AACAATGTCAAACAAGCTGCAAGTAAAGCAGTTAAAATGGGTCGTAGTGATCCGAGGAAG
ATTATCTTTTCTGCTAAAGTGGGTTTTGCTCTTGCCCTTGTTTCGATTCTCATTTTCTTC
AAAGAACCCATACCCTATATTGGTAGCCACTCCATTTGGGCGATTCTTACTGTTGTCGTC
GTTTTTGAATTCAGCATAGGTGCAACGCTTAACAAAGGATTTAACAGGGCTTTGGGGACA
TTTTCTGCTGGAGGATTAGCTTTGGGCATTGCTGAACTGTCTCTTATGGCTGGAGGATTT
CGAGAGATTTTGATTGTGATCAGTGTATTTATTGCAGGATTTTGCGCAACTTATATGAAA
TTGTATCCTCCACTGAAGGAATATGAATATGGATTCCGGGTTTTCTTATTGACATATTGT
ATAGTGCTAGTATCGGGGACTTCGGATTTTGTAAAGACAGCTGTTTCTCGATTGTTACTT
ATTGGGGTTGGAGCTGCTGTTTGTTTGGTTATAAATATATGCATCTTCCCTATTTGGGCT
GGTGAAGATTTGCACAAATTGGTGGTGAAAAACTTTAAGGGTGTCGCTACTTCTTTGGAA
GGTTGTGTCAAAGACTATTTGCAATGTCTTGAATACGATAGGATACCATCAAAAATTCTT
CTTTACCAGGCATCTGATGATCCTATCTACAGTGGTTACAGGACTGCTGTAGAGTCCACC
AGCCAAGAAGCTTCTCTGTTAGCTTTTGCTGTGTGGGAACCCCCTCATGGACGATACAGA
ATGCTCAATTATCCTTGGGGTGAATATACTAGAGTCAGTGGTGCACTACGACACTGTGCT
TTCATGATAATGGCAATGCATGGATGTATTCTTTCGGAAATACAGGCAGCATCTGAATTG
AGGCGGACTTTTATGAAGGAGATTCAGAGAGTTGGGACTGAAGGAGCTAAAGTGATACGA
CTGCTTGGGGAGAAAGTTGAAAAGATGGAGAAACTAAGCCCCGGAGATCCTCTCAAAGAT
GTTCATGAAGCTGCTGAGGATCTCCAATTGTTGATTGACCAAAAATCTTATCTTTTGGTT
AATGCAGAGAATTGGGAAAGTTCAAAAAGACCTAAGAAGTTTGAAGATCCTGAACGCCTA
CAAGAACTTAAGGACAATGAACCTAAACCAATGGTAATTAACTCCCTTAGTGAAGCTACT
CTCCATCTAAGGTCTGCTCACACATTGAAACACATGGATACTCTTAATCCAAATGTAAGT
GTCAACTTTTCTACTTCACAATGGGGTTCCTCAGCAGATGTATTCACGCAGCAGACAATG
TGGCCTTCACGTCTTTCACTCATTGGAGATGTGATTTTAAACGAACGTGAAGTACGGACT
TTTGAAAGTGCTAGTACATTATCACTGTCAACATTTACATCCTTGTTGATTGAGTTTGTT
GCAAGACTTCAGAATCTTCTACATGCATTTCAAGAGCTCAGTGAAAAGGCAAAATTTAAG
GAACCTGTAGATACTAAAGAGGCAACTACTCTTTGA