Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001465
CDS Infomation

pacid=37459240 polypeptide=PGSC0003DMP400001089 locus=PGSC0003DMG400000539 ID=PGSC0003DMT400001465.v4.03 annot-version=v4.03
Sequence

ATGGGAAGCTCAGAAACGGAAGGAGGAATGTTGGAATGCGATACTGGAAGTATTGTTTGG
GTCCGAAGGCGAAATGGGTCATGGTGGCCTGGTAAAATATTGGGGACTAATGAGCTTTCT
GCTACTCATCTGATGTCTCCACGATCTGGAACTCCAGTCAAGCTTCTTGGCAGGGAAGAT
GCTAGTGTGGATTGGTATAACTTGGAGAAGTCAAAACGTGTCAAAGCATTTCGTTGTGGT
GAATTTGATGATTGTATTAAACGGGCTGAAGCTTCCCAAGGTATGCCTCCAAAGAAAAGA
GAGAAATATGCACGTCGAGAAGATGCTATACTTCATGCTCTTGAACTTGAGAGGCTTTTG
TTAGACAAAAAATATGGAGCAGGTTATTCATCCACTGATAAGAACAATAAATCTACTGCT
GATTTTGTTGGAAGAGAGTCTTTGACATCATCAGAATACCCGGAAAATGGGAATGGGAGA
CACATAGGACCTAAGTGCCATCAAGTTTCTACTAGATCTGTTGCCTCCCTTGAGGACAAG
AAAGCATTAAATATTTCGTCCACAGAGGTACCCAAAGATCGAAATCAACTTAGTGGGGAT
GTTGATAATTCTGGTGTACTTCCGAGAATGAGAGGTTTACAAGATTTTGGTCTTAGTACT
GCTCCTTCTGAACATAATCATTCTCTATCACTTGCTTTAAGTGGTACAGACCAACTTGTG
CTTGATAGCAGTGCTCGTGCTGTTCCTGATGAGAGTAATAATGCAGAAGGCCTGGTTAAT
GTTGAGAAAAGAAGCACATTGGAGAAAAGGAAACCATCAGATGATGCGTTGGTAGAAGAC
GTCCTTGTCAAGAGGCGCGATAGGCGCCGCCCTCTTGCTCATGTTTTGCAGAGTTCTGAA
AATTTGCCAGTTTCTCTCCCTCAGCCGGAGCCAGCTTCCATTTCCACCTCTGGTACAGGA
AAGGAACTGCCTCGAGTTGAATCACTTACAAAGAATATCAGTTTTAGGTATCTGGCAGTT
GAACCTAGCAACAGTTTATGTGTTGACGAGAGTCATCAATCCCAGATTGAATTTCCAACA
TTGAAGACTGAAGATAACAATTGTTCTCATCCTGTTGTCTTGTGTGAACAGAATGGTTGT
GGTTCAACAGAGTTCACTGAAACTGATTCAACCGAGTCAGATTCTCTGGAATCAGATACC
GATGATGAGTTGGCTACACTCTCAGATGGTGCTGTATCTATAGAATTAGAACCCAAATAT
CTTGGAAGATCTGAAGCACTACCTGAACATGGTAGCATGAGCAGCGAGGAGGTTGATGAT
TTTACACTCGCAGATGGCACTTCTCATCCTTGTCATCAGGAATCTGTCTCTTCTGGTTTT
GGGGTGTCTAAATGGAAACTAAAAGGGAAAAGGAATAACCGAAGTCTTAACAAGAGGCCT
ATTGATTCTTTTGATGGAGATCTTGCAAGGAGACCCAGTCATATGTCCACTTTCAAAGAA
AAGGGAGGTTATGCTTGTCTTCAGGATGATGTGGTTACAAACTCCAGTGTCCAAATGGCT
GGATATGGATCTAAAGCTCCGGGTAGGGCTAGCCGAAACATGTTGAGTTGGGGGGATTTG
TCTTGGGATGATCAACCTTCAATTAGAGGATACTGGGAGGAGGCTGACGAATATTTTGAT
CCTATGAATAGCTACCGTCATGTTGGTGGCAGGACCATGCTGGTAGATGTAGATCTGAAA
GTCCAGTCAAGTTATCAGAGAGAACATGTGCCTATGATTTCATTGATGAGTAAGCTAAAT
GGGCAGGCAATAATAGGGCATCCTATCCAAGTTGAAACCCTTGCAAACGGTTCTACTGAC
AGCTTCCTTGGGGATATTGATAATTATCCAGAAACATTGGGTTATGATCCATCACTCCAA
CCTACATGGAGAACTGCTCGCCGGACTGCCAATGTTCGTGTTCCAAGGCCACATGTATCA
TCAGCAAAAGATAATCCTGAAGGAATCAAGCATGCCCAGGGTTCTGATCATCACAGAAAT
GTTCGAAAAGCTACTGTACAGAAGGCAAGCACTACGAGGAAGGCCACTTCCCGGCCTCCC
ATAGAAAGAACATTTTCAAGAAAGCCAGGGAAAAAGGTTAGTTTATCTTCTAACCAAAAG
ATAAGGACGCTTTCTTCGATAGCCTCACAGCAGAAACAAAGTAGTGATTCCAACAGTTAT
CAAGTGGATGGGGCACTCAAACAAGAGACACTACCAACTGTTGTAGCTTGTATTCCGGTA
AAGTTAGTCTTCAGTAGGTTGAATGAGGAGTTAGTGGGCCGTCGTCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001089
PEP Infomation

pacid=37459240 transcript=PGSC0003DMT400001465 locus=PGSC0003DMG400000539 ID=PGSC0003DMT400001465.v4.03 annot-version=v4.03
Sequence

MGSSETEGGMLECDTGSIVWVRRRNGSWWPGKILGTNELSATHLMSPRSGTPVKLLGRED
ASVDWYNLEKSKRVKAFRCGEFDDCIKRAEASQGMPPKKREKYARREDAILHALELERLL
LDKKYGAGYSSTDKNNKSTADFVGRESLTSSEYPENGNGRHIGPKCHQVSTRSVASLEDK
KALNISSTEVPKDRNQLSGDVDNSGVLPRMRGLQDFGLSTAPSEHNHSLSLALSGTDQLV
LDSSARAVPDESNNAEGLVNVEKRSTLEKRKPSDDALVEDVLVKRRDRRRPLAHVLQSSE
NLPVSLPQPEPASISTSGTGKELPRVESLTKNISFRYLAVEPSNSLCVDESHQSQIEFPT
LKTEDNNCSHPVVLCEQNGCGSTEFTETDSTESDSLESDTDDELATLSDGAVSIELEPKY
LGRSEALPEHGSMSSEEVDDFTLADGTSHPCHQESVSSGFGVSKWKLKGKRNNRSLNKRP
IDSFDGDLARRPSHMSTFKEKGGYACLQDDVVTNSSVQMAGYGSKAPGRASRNMLSWGDL
SWDDQPSIRGYWEEADEYFDPMNSYRHVGGRTMLVDVDLKVQSSYQREHVPMISLMSKLN
GQAIIGHPIQVETLANGSTDSFLGDIDNYPETLGYDPSLQPTWRTARRTANVRVPRPHVS
SAKDNPEGIKHAQGSDHHRNVRKATVQKASTTRKATSRPPIERTFSRKPGKKVSLSSNQK
IRTLSSIASQQKQSSDSNSYQVDGALKQETLPTVVACIPVKLVFSRLNEELVGRRP*

Transcript Sequence

Transcript ID

PGSC0003DMT400001465
Transcript Infomation

pacid=37459240 locus=PGSC0003DMG400000539 ID=PGSC0003DMT400001465.v4.03 annot-version=v4.03
Sequence

ATGGGAAGCTCAGAAACGGAAGGAGGAATGTTGGAATGCGATACTGGAAGTATTGTTTGG
GTCCGAAGGCGAAATGGGTCATGGTGGCCTGGTAAAATATTGGGGACTAATGAGCTTTCT
GCTACTCATCTGATGTCTCCACGATCTGGAACTCCAGTCAAGCTTCTTGGCAGGGAAGAT
GCTAGTGTGGATTGGTATAACTTGGAGAAGTCAAAACGTGTCAAAGCATTTCGTTGTGGT
GAATTTGATGATTGTATTAAACGGGCTGAAGCTTCCCAAGGTATGCCTCCAAAGAAAAGA
GAGAAATATGCACGTCGAGAAGATGCTATACTTCATGCTCTTGAACTTGAGAGGCTTTTG
TTAGACAAAAAATATGGAGCAGGTTATTCATCCACTGATAAGAACAATAAATCTACTGCT
GATTTTGTTGGAAGAGAGTCTTTGACATCATCAGAATACCCGGAAAATGGGAATGGGAGA
CACATAGGACCTAAGTGCCATCAAGTTTCTACTAGATCTGTTGCCTCCCTTGAGGACAAG
AAAGCATTAAATATTTCGTCCACAGAGGTACCCAAAGATCGAAATCAACTTAGTGGGGAT
GTTGATAATTCTGGTGTACTTCCGAGAATGAGAGGTTTACAAGATTTTGGTCTTAGTACT
GCTCCTTCTGAACATAATCATTCTCTATCACTTGCTTTAAGTGGTACAGACCAACTTGTG
CTTGATAGCAGTGCTCGTGCTGTTCCTGATGAGAGTAATAATGCAGAAGGCCTGGTTAAT
GTTGAGAAAAGAAGCACATTGGAGAAAAGGAAACCATCAGATGATGCGTTGGTAGAAGAC
GTCCTTGTCAAGAGGCGCGATAGGCGCCGCCCTCTTGCTCATGTTTTGCAGAGTTCTGAA
AATTTGCCAGTTTCTCTCCCTCAGCCGGAGCCAGCTTCCATTTCCACCTCTGGTACAGGA
AAGGAACTGCCTCGAGTTGAATCACTTACAAAGAATATCAGTTTTAGGTATCTGGCAGTT
GAACCTAGCAACAGTTTATGTGTTGACGAGAGTCATCAATCCCAGATTGAATTTCCAACA
TTGAAGACTGAAGATAACAATTGTTCTCATCCTGTTGTCTTGTGTGAACAGAATGGTTGT
GGTTCAACAGAGTTCACTGAAACTGATTCAACCGAGTCAGATTCTCTGGAATCAGATACC
GATGATGAGTTGGCTACACTCTCAGATGGTGCTGTATCTATAGAATTAGAACCCAAATAT
CTTGGAAGATCTGAAGCACTACCTGAACATGGTAGCATGAGCAGCGAGGAGGTTGATGAT
TTTACACTCGCAGATGGCACTTCTCATCCTTGTCATCAGGAATCTGTCTCTTCTGGTTTT
GGGGTGTCTAAATGGAAACTAAAAGGGAAAAGGAATAACCGAAGTCTTAACAAGAGGCCT
ATTGATTCTTTTGATGGAGATCTTGCAAGGAGACCCAGTCATATGTCCACTTTCAAAGAA
AAGGGAGGTTATGCTTGTCTTCAGGATGATGTGGTTACAAACTCCAGTGTCCAAATGGCT
GGATATGGATCTAAAGCTCCGGGTAGGGCTAGCCGAAACATGTTGAGTTGGGGGGATTTG
TCTTGGGATGATCAACCTTCAATTAGAGGATACTGGGAGGAGGCTGACGAATATTTTGAT
CCTATGAATAGCTACCGTCATGTTGGTGGCAGGACCATGCTGGTAGATGTAGATCTGAAA
GTCCAGTCAAGTTATCAGAGAGAACATGTGCCTATGATTTCATTGATGAGTAAGCTAAAT
GGGCAGGCAATAATAGGGCATCCTATCCAAGTTGAAACCCTTGCAAACGGTTCTACTGAC
AGCTTCCTTGGGGATATTGATAATTATCCAGAAACATTGGGTTATGATCCATCACTCCAA
CCTACATGGAGAACTGCTCGCCGGACTGCCAATGTTCGTGTTCCAAGGCCACATGTATCA
TCAGCAAAAGATAATCCTGAAGGAATCAAGCATGCCCAGGGTTCTGATCATCACAGAAAT
GTTCGAAAAGCTACTGTACAGAAGGCAAGCACTACGAGGAAGGCCACTTCCCGGCCTCCC
ATAGAAAGAACATTTTCAAGAAAGCCAGGGAAAAAGGTTAGTTTATCTTCTAACCAAAAG
ATAAGGACGCTTTCTTCGATAGCCTCACAGCAGAAACAAAGTAGTGATTCCAACAGTTAT
CAAGTGGATGGGGCACTCAAACAAGAGACACTACCAACTGTTGTAGCTTGTATTCCGGTA
AAGTTAGTCTTCAGTAGGTTGAATGAGGAGTTAGTGGGCCGTCGTCCATAA