Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001435
CDS Infomation

pacid=37425418 polypeptide=PGSC0003DMP400001066 locus=PGSC0003DMG400000529 ID=PGSC0003DMT400001435.v4.03 annot-version=v4.03
Sequence

ATGACTAGAATATTTGAAAAGCCGGCGTCTCACCTTCGTCATTTACAGCAATCGTTGAAG
AACAAATCATCTTCGACTGATGTGCCATGGTGGCGCCAAATTCTCGACCCAAACAGCGAT
ATTGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGAT
CCACTTTACTTCTACGTACCTTTCGTCAGCGAAAGAGCTTGTATGTCCACTGATGACGAA
GCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTCCACATT
GCCATGAAGTTCCGCACCGCTTTTGTCGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAG
CTTGTTATGGACCCGCGTGAAATTGCTATACGATATCTCAAGACTGATTTCATCGTTGAT
TTTACAGCTGCTCTTCCCCTGCCTCAAATTGTCATTCGGTATGTAATCCCAGCAGCAAAA
AGAAATGGTTCTGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTG
CCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACTACAGGTTTTATT
GCTAAAACAGCCTGGGCAGGAGCAGCTTATAATCTCCTTCTGTTCATGTTAGCGAGTCAT
GTGGCAGGAGCTTCCTGGTACGTGGCATCTATAGGAAGACAATTCTCTTGCTGGGCAATT
GAATGTAATAAGGAGCGTGATGCAGTTCCACCCTGCATTCTTGAATTTTTAGACTGTAGC
AATGTTGATGAGGATAGTTATATACGCGATTACTGGCGAAACAGCACAAAAGTGCTTGAC
AAATGTGATGCTGTAAATGATGAAGATTCTGGTTTTAAGTTTGGAATTTTCGCTGATGCC
TTTACTAATGAAGTGGCTTCATCATCATTCATGGCGAAATATTTATACTGTCTTTGGTGG
GGTCTAAGAAATTTGAGTTCATATGGGCAGAATTTGAATACTAGCACATATATTGGTGAA
ACCTTATTCAGCATTTTCATAAGTATCATCGGTTTAGTTCTCTTTGCACAGTTAATTGGA
AACATGCAGACTTATCTGCAATCTATGACCGTAAAAATTGAGGAATGGAGAATTAGAAAA
AGAGATATAGAAGAATGGATGAGGCACCGACAGTTGCCTGAAGACTTGCAAGAACGTGTT
CGCCGTTTTGATCAATGTAAATGGCTTGCAACAAGAGGAGTTAATGAAGAAGAGATCTTG
CAAACTTTGCCTTTGGATCTTCGTCGTCAAATCCAAAGACACCTATGCCTTAATCTTGTT
CGACGAGTTCCATTTTTTGAGCAAATGGATGACCAGCTGCTTGATGCAATATGTGAACGC
CTAGTGTCGACCCTGAGCATAATGGGCACCTATGTTGTTCTAGAAGATGATCCAGTGAAT
GAGATGCTCTTTATCATCAGGGGACAACTAGAGAGCTCCACAACAAATGGGGGAAGATCT
GGATTCTTCAATTCTATCACCCTTGGACCTAATGACTTCTGTGGTGAAGAATTGCTGACT
TGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACTGTGAGAACACTT
TCTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTTGCAGTTCAATTT
AAACGTCTTCACAGCATGAAGCTACAGCATGCATTTAGGTACTATTCTCATCAGTGGAGA
ACATGGGGTGCTTGTTTTATACAGGCTGCATGGAGAAGGTATATGAAGAAAAAGATGGAA
TACGAGTTGGCTCTACAAGAGAGCTATTATTATAATCAAGATCCTAACGATGAGGGTAAC
TACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGACAGTGGTTCT
CGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTGCTAATACGAGA
AGAGGAATAGAACTGAAGATGGCTGATTCTTCTTCCAGCTTAAAAATGCCCAAGTTGTTT
AAGCCAGATGAGCCTGATTTTTCTGCAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400001066
PEP Infomation

pacid=37425418 transcript=PGSC0003DMT400001435 locus=PGSC0003DMG400000529 ID=PGSC0003DMT400001435.v4.03 annot-version=v4.03
Sequence

MTRIFEKPASHLRHLQQSLKNKSSSTDVPWWRQILDPNSDIVNRWNYVFLLTCLISLFID
PLYFYVPFVSERACMSTDDEAAREITIYRSLTDIFYFLHIAMKFRTAFVAPSSRVFGRGE
LVMDPREIAIRYLKTDFIVDFTAALPLPQIVIRYVIPAAKRNGSGHSKSTLALIVLIQYV
PRLFVIFPLNQQIIKTTGFIAKTAWAGAAYNLLLFMLASHVAGASWYVASIGRQFSCWAI
ECNKERDAVPPCILEFLDCSNVDEDSYIRDYWRNSTKVLDKCDAVNDEDSGFKFGIFADA
FTNEVASSSFMAKYLYCLWWGLRNLSSYGQNLNTSTYIGETLFSIFISIIGLVLFAQLIG
NMQTYLQSMTVKIEEWRIRKRDIEEWMRHRQLPEDLQERVRRFDQCKWLATRGVNEEEIL
QTLPLDLRRQIQRHLCLNLVRRVPFFEQMDDQLLDAICERLVSTLSIMGTYVVLEDDPVN
EMLFIIRGQLESSTTNGGRSGFFNSITLGPNDFCGEELLTWALLPNSTQLPASTRTVRTL
SEVEAFALRAEDLKFFAVQFKRLHSMKLQHAFRYYSHQWRTWGACFIQAAWRRYMKKKME
YELALQESYYYNQDPNDEGNYNEQSFDDAGPEQPLVDSGSRGSQQLGATILAKRFAANTR
RGIELKMADSSSSLKMPKLFKPDEPDFSAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400001435
Transcript Infomation

pacid=37425418 locus=PGSC0003DMG400000529 ID=PGSC0003DMT400001435.v4.03 annot-version=v4.03
Sequence

ATGACTAGAATATTTGAAAAGCCGGCGTCTCACCTTCGTCATTTACAGCAATCGTTGAAG
AACAAATCATCTTCGACTGATGTGCCATGGTGGCGCCAAATTCTCGACCCAAACAGCGAT
ATTGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGAT
CCACTTTACTTCTACGTACCTTTCGTCAGCGAAAGAGCTTGTATGTCCACTGATGACGAA
GCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTCCACATT
GCCATGAAGTTCCGCACCGCTTTTGTCGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAG
CTTGTTATGGACCCGCGTGAAATTGCTATACGATATCTCAAGACTGATTTCATCGTTGAT
TTTACAGCTGCTCTTCCCCTGCCTCAAATTGTCATTCGGTATGTAATCCCAGCAGCAAAA
AGAAATGGTTCTGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTG
CCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACTACAGGTTTTATT
GCTAAAACAGCCTGGGCAGGAGCAGCTTATAATCTCCTTCTGTTCATGTTAGCGAGTCAT
GTGGCAGGAGCTTCCTGGTACGTGGCATCTATAGGAAGACAATTCTCTTGCTGGGCAATT
GAATGTAATAAGGAGCGTGATGCAGTTCCACCCTGCATTCTTGAATTTTTAGACTGTAGC
AATGTTGATGAGGATAGTTATATACGCGATTACTGGCGAAACAGCACAAAAGTGCTTGAC
AAATGTGATGCTGTAAATGATGAAGATTCTGGTTTTAAGTTTGGAATTTTCGCTGATGCC
TTTACTAATGAAGTGGCTTCATCATCATTCATGGCGAAATATTTATACTGTCTTTGGTGG
GGTCTAAGAAATTTGAGTTCATATGGGCAGAATTTGAATACTAGCACATATATTGGTGAA
ACCTTATTCAGCATTTTCATAAGTATCATCGGTTTAGTTCTCTTTGCACAGTTAATTGGA
AACATGCAGACTTATCTGCAATCTATGACCGTAAAAATTGAGGAATGGAGAATTAGAAAA
AGAGATATAGAAGAATGGATGAGGCACCGACAGTTGCCTGAAGACTTGCAAGAACGTGTT
CGCCGTTTTGATCAATGTAAATGGCTTGCAACAAGAGGAGTTAATGAAGAAGAGATCTTG
CAAACTTTGCCTTTGGATCTTCGTCGTCAAATCCAAAGACACCTATGCCTTAATCTTGTT
CGACGAGTTCCATTTTTTGAGCAAATGGATGACCAGCTGCTTGATGCAATATGTGAACGC
CTAGTGTCGACCCTGAGCATAATGGGCACCTATGTTGTTCTAGAAGATGATCCAGTGAAT
GAGATGCTCTTTATCATCAGGGGACAACTAGAGAGCTCCACAACAAATGGGGGAAGATCT
GGATTCTTCAATTCTATCACCCTTGGACCTAATGACTTCTGTGGTGAAGAATTGCTGACT
TGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACTGTGAGAACACTT
TCTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTTGCAGTTCAATTT
AAACGTCTTCACAGCATGAAGCTACAGCATGCATTTAGGTACTATTCTCATCAGTGGAGA
ACATGGGGTGCTTGTTTTATACAGGCTGCATGGAGAAGGTATATGAAGAAAAAGATGGAA
TACGAGTTGGCTCTACAAGAGAGCTATTATTATAATCAAGATCCTAACGATGAGGGTAAC
TACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGACAGTGGTTCT
CGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTGCTAATACGAGA
AGAGGAATAGAACTGAAGATGGCTGATTCTTCTTCCAGCTTAAAAATGCCCAAGTTGTTT
AAGCCAGATGAGCCTGATTTTTCTGCAGAATGA