Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001405
CDS Infomation

pacid=37426374 polypeptide=PGSC0003DMP400001039 locus=PGSC0003DMG400000523 ID=PGSC0003DMT400001405.v4.03 annot-version=v4.03
Sequence

ATGCCTGAATTTGCCATGGATGAATCAATTGTTGATGGAAATCACAAAGAACCTAATGGC
CATTTTCTACCTCACAGAGAAATTTTCGATCAAGGGTCTCCGAGGAGTCCGTTGAGTACA
CATAGTCGCGAAACTGAGTCGATTGATCTGGATATAAATGGAGGTGTTGATACTTCAATT
GAGCAACTATACAATAATGTGTATGAAATGCAGAGCTCCGACTATTCTCCTTCGAGAAGG
AGCTTTCTATCATATGGTGAGGAATCGAGAATTGACTCTGAGTTAAGGTACCTTGCAGGG
GTAGATTTTGGTGAATTGGATAGTAAGAAGGGGCTTTCTGAGCATGACAAAGTACGCAAT
GATGAGAAGTTGGGAAAAATTAAAACATATCCTGCAAGTCCCAACTCTGTTTGGTCGGCA
AAGGGAAAGAAGTTTTCTCCTTTGCAAACTGATTCTCCAATATCTAACAAGCCACCAAGA
TCAAGGAGTAAGTCTTTTAATGAAAAGCCTTCTCCCAAAAGATTTGGGAATTTGAAAAAG
CTCAATGCAACTATGTCCATGAAGAATGAGAAGAATTCGAATGCAAATGAGGATTCATCT
AAGGCAGGATATTTAGGACCCTATTTACTTAAACAAGCCAGGGATATGATTTCAACGGCC
GGAGAAAATGTTCAAAAGGCTCTTGAACTAGCCCTTCGAGCCATGAAATCGTTTGAGAGT
TCTTCAAAGGGAAAGAACAGTTTAGAGTTTGTTATGTGTTTGCACGTTGTAGCAGCGTTA
AATTGTCGATTAGGGAAGTACAACGAGGCAATTCCACTGTTGGAGCGATCAATTGAAATT
CCTGACTTGGATGTGGGACAAAATCATGCACTCGCAAAATTTGCAGGGTGCATGCAGTTA
GGTGATACATATGCAATGCTCGGACAGTTAGAGAACTCGATACTGTGCTACACTGCTGGC
CTGGAAATTCAAAGGCAAGTTCTTGGGGAGAAAGACACGAGATTTGGCGAGACTTGTAGG
TATGTGGCTGAAGCACATGTTCAAGCTATGCAATTTGATGAGGCTGAGAAGCTTTGTCAA
ATGGCACTTGACATTCATAGGGAGAATAATTCATCAGCTTCTCCTGAAGAAGCTGCTGAC
AGGAGACTCTTGGGGCTTATCTACGATTCAAAGGGAGACTACGAGGCTGCTCTTGAGCAT
TATGTTTTAGCAGGCATGGCCATGGCAGCTAGTGGCCAGGAAGCTGAAGTAGCGTCCATT
GACTGCAACATTGGCGATGCATATTTATCTATGGCACGGTATGATGAGGCTATATGTGCT
TACCAAAAAGCTCTTACTATGTTCAAGTCTACCAAAGGAGAGAACCATCCCTCAGTTGCA
TCGGTCTATGTACGTTTGGCTGATTTGTACAATAAGATTGGAAAATTCAGGGAATCCAAA
TCTTACTGTGAAAATGCACTTCGGATTTATACGAAGGCCGTCCCTGGAAGCCATCCAGAA
GAGATTGCAAGTGGTCTTGTCGATGTATCTGTGATCTATGAGTCAATGAACGAACCTGAT
CAGGCGCTCAAGTTGCTTCAGAAGGCCATAAAAGCGTATGGAAATGCACCAGGACAACAG
AGCACTATTGCAGGAATTGAAGCCCAGATTGGGGTCCTGTACTATATTCTGGGGGAGTAT
ATGGACTCGTACGATTCCCTGAAAACTGCAGTATCGAAATTCAGGGAAATTGGAGAGAAG
AAGTCTGCAATTTTTGGTATTACTTTAAACCAAATGGGACTTGCCTGTGTACAACTTTAT
GCAATTAACGAAGCTGCAGACTTATTTGAAGAAGCAAGGATAATTTTAGAGACTGAATGT
GGACCGTATCACGCAGATACATTAGGAATATACAGCAATCTTGCTGGAACTTATGATGCA
ATGGGCAGGACGGATGATGCAATTGAAATCTTAGAATTCGTCGTTGGAATGAGGGAGGAG
AAACTTGGGACAGCAAATCCTGATGTGGATGATGAGAAGAGGAGATTAACTGAGTTATTA
AGAGAATCAGGGAGAGTGAGGAGCAGGAAATCAAGATCCCTGGAAACACTTCTTGGTAAC
ATGTCTCATATTTTCCTCAAGGATCAAGAGATTGATATACTAGAAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400001039
PEP Infomation

pacid=37426374 transcript=PGSC0003DMT400001405 locus=PGSC0003DMG400000523 ID=PGSC0003DMT400001405.v4.03 annot-version=v4.03
Sequence

MPEFAMDESIVDGNHKEPNGHFLPHREIFDQGSPRSPLSTHSRETESIDLDINGGVDTSI
EQLYNNVYEMQSSDYSPSRRSFLSYGEESRIDSELRYLAGVDFGELDSKKGLSEHDKVRN
DEKLGKIKTYPASPNSVWSAKGKKFSPLQTDSPISNKPPRSRSKSFNEKPSPKRFGNLKK
LNATMSMKNEKNSNANEDSSKAGYLGPYLLKQARDMISTAGENVQKALELALRAMKSFES
SSKGKNSLEFVMCLHVVAALNCRLGKYNEAIPLLERSIEIPDLDVGQNHALAKFAGCMQL
GDTYAMLGQLENSILCYTAGLEIQRQVLGEKDTRFGETCRYVAEAHVQAMQFDEAEKLCQ
MALDIHRENNSSASPEEAADRRLLGLIYDSKGDYEAALEHYVLAGMAMAASGQEAEVASI
DCNIGDAYLSMARYDEAICAYQKALTMFKSTKGENHPSVASVYVRLADLYNKIGKFRESK
SYCENALRIYTKAVPGSHPEEIASGLVDVSVIYESMNEPDQALKLLQKAIKAYGNAPGQQ
STIAGIEAQIGVLYYILGEYMDSYDSLKTAVSKFREIGEKKSAIFGITLNQMGLACVQLY
AINEAADLFEEARIILETECGPYHADTLGIYSNLAGTYDAMGRTDDAIEILEFVVGMREE
KLGTANPDVDDEKRRLTELLRESGRVRSRKSRSLETLLGNMSHIFLKDQEIDILER*

Transcript Sequence

Transcript ID

PGSC0003DMT400001405
Transcript Infomation

pacid=37426374 locus=PGSC0003DMG400000523 ID=PGSC0003DMT400001405.v4.03 annot-version=v4.03
Sequence

ATGCCTGAATTTGCCATGGATGAATCAATTGTTGATGGAAATCACAAAGAACCTAATGGC
CATTTTCTACCTCACAGAGAAATTTTCGATCAAGGGTCTCCGAGGAGTCCGTTGAGTACA
CATAGTCGCGAAACTGAGTCGATTGATCTGGATATAAATGGAGGTGTTGATACTTCAATT
GAGCAACTATACAATAATGTGTATGAAATGCAGAGCTCCGACTATTCTCCTTCGAGAAGG
AGCTTTCTATCATATGGTGAGGAATCGAGAATTGACTCTGAGTTAAGGTACCTTGCAGGG
GTAGATTTTGGTGAATTGGATAGTAAGAAGGGGCTTTCTGAGCATGACAAAGTACGCAAT
GATGAGAAGTTGGGAAAAATTAAAACATATCCTGCAAGTCCCAACTCTGTTTGGTCGGCA
AAGGGAAAGAAGTTTTCTCCTTTGCAAACTGATTCTCCAATATCTAACAAGCCACCAAGA
TCAAGGAGTAAGTCTTTTAATGAAAAGCCTTCTCCCAAAAGATTTGGGAATTTGAAAAAG
CTCAATGCAACTATGTCCATGAAGAATGAGAAGAATTCGAATGCAAATGAGGATTCATCT
AAGGCAGGATATTTAGGACCCTATTTACTTAAACAAGCCAGGGATATGATTTCAACGGCC
GGAGAAAATGTTCAAAAGGCTCTTGAACTAGCCCTTCGAGCCATGAAATCGTTTGAGAGT
TCTTCAAAGGGAAAGAACAGTTTAGAGTTTGTTATGTGTTTGCACGTTGTAGCAGCGTTA
AATTGTCGATTAGGGAAGTACAACGAGGCAATTCCACTGTTGGAGCGATCAATTGAAATT
CCTGACTTGGATGTGGGACAAAATCATGCACTCGCAAAATTTGCAGGGTGCATGCAGTTA
GGTGATACATATGCAATGCTCGGACAGTTAGAGAACTCGATACTGTGCTACACTGCTGGC
CTGGAAATTCAAAGGCAAGTTCTTGGGGAGAAAGACACGAGATTTGGCGAGACTTGTAGG
TATGTGGCTGAAGCACATGTTCAAGCTATGCAATTTGATGAGGCTGAGAAGCTTTGTCAA
ATGGCACTTGACATTCATAGGGAGAATAATTCATCAGCTTCTCCTGAAGAAGCTGCTGAC
AGGAGACTCTTGGGGCTTATCTACGATTCAAAGGGAGACTACGAGGCTGCTCTTGAGCAT
TATGTTTTAGCAGGCATGGCCATGGCAGCTAGTGGCCAGGAAGCTGAAGTAGCGTCCATT
GACTGCAACATTGGCGATGCATATTTATCTATGGCACGGTATGATGAGGCTATATGTGCT
TACCAAAAAGCTCTTACTATGTTCAAGTCTACCAAAGGAGAGAACCATCCCTCAGTTGCA
TCGGTCTATGTACGTTTGGCTGATTTGTACAATAAGATTGGAAAATTCAGGGAATCCAAA
TCTTACTGTGAAAATGCACTTCGGATTTATACGAAGGCCGTCCCTGGAAGCCATCCAGAA
GAGATTGCAAGTGGTCTTGTCGATGTATCTGTGATCTATGAGTCAATGAACGAACCTGAT
CAGGCGCTCAAGTTGCTTCAGAAGGCCATAAAAGCGTATGGAAATGCACCAGGACAACAG
AGCACTATTGCAGGAATTGAAGCCCAGATTGGGGTCCTGTACTATATTCTGGGGGAGTAT
ATGGACTCGTACGATTCCCTGAAAACTGCAGTATCGAAATTCAGGGAAATTGGAGAGAAG
AAGTCTGCAATTTTTGGTATTACTTTAAACCAAATGGGACTTGCCTGTGTACAACTTTAT
GCAATTAACGAAGCTGCAGACTTATTTGAAGAAGCAAGGATAATTTTAGAGACTGAATGT
GGACCGTATCACGCAGATACATTAGGAATATACAGCAATCTTGCTGGAACTTATGATGCA
ATGGGCAGGACGGATGATGCAATTGAAATCTTAGAATTCGTCGTTGGAATGAGGGAGGAG
AAACTTGGGACAGCAAATCCTGATGTGGATGATGAGAAGAGGAGATTAACTGAGTTATTA
AGAGAATCAGGGAGAGTGAGGAGCAGGAAATCAAGATCCCTGGAAACACTTCTTGGTAAC
ATGTCTCATATTTTCCTCAAGGATCAAGAGATTGATATACTAGAAAGATAA