Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001358
CDS Infomation

pacid=37428813 polypeptide=PGSC0003DMP400001000 locus=PGSC0003DMG402000506 ID=PGSC0003DMT400001358.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTAATCTCTTGCTATTTCCTCTTCGTTGTTTCATTCACAAAGATTTTCAT
GATGTCGTTGACAGAATGAGTCTTCTCAACAAACTTTTGTTTATGATGGTTCACTTGGTT
GATAAATTGAACCTGTGGCACCGGCTACCGGTGTTCTTGGGGCTACTTTATCTCGCAGCA
CGGCGACATCTTCATCAGGAATATAATTTGATCAACGTCGGTGTCGGTAGAAAACCTATC
GACGTTACATCAAATCGGGCCGTTGGAAAATACAACGACCCTTTTAATGAAGGAGGTGGC
AGTGAATTTCCTTTCTTTGGTAGGAATATGATGCCTGTTGATCAACATGAAAAGTTAAAG
AATCCAGATCCTATGGTAGTTGCAACAAAGCTACTAGCACGCAGAAAATTCATAGACACA
GGAAAACAATTTAACATGATAGCTGCCTCATGGATACAATTTATGATTCATGATTGGATC
GATCATTTGGAAGATACTCAACAGATTGAGCTAAGGGCACCTGAAGAAGTTGCAAGTGAG
TGTCCTCTCAAGTCCTTTAAGTTTTTCAAGACCAAGCAAACTCCTACGGGTTTATGTGAT
ATCCAGACTGGTCACTTGAACATTCGTACTCCACAATGGGATGGAAGTGCTATTTATGGG
AACAACGCAGAAGTTTCAAAGAAAGTGAGGACATTTAAAGATGGAAAATTGAAACTATCA
GAAAATGGGCTCCTTGAACAAGATGAAAATGGAAAAATCATCTCTGGTGATGTTCGCAAT
AATTGGGCTGGACTTTTGTCACTGCAGGCACTCTTTGTTCAAGAGCATAATCTTGTTTGT
GACACCTTGAAGAAAGAATATCCAGAATTGAAAGATGAGGACTTGTATCGTCATGCAAAG
CTTGTCACTTCTGCTGTAATTGCGAAAATTCACACCATAGATTGGACAGTTGAACTTCTC
AATACCGACACCCTTCTAGCAGGAATGCGCGCCAATTGGTATGGATTGCTAGGAAAGAAA
TTCAAGGATACATTTGGGCATGTTGGAGGTTCCATTTTAGGTGGTTTTGTGGGAATGAAG
AAACCTGAGGATCATGGTGTGCCTTATTCCTTAACTGAGGAATTTACGAGTGTCTATCGG
ATGCATCAACTCCTACCTGATACGCTTCAGCTAAGAAATATCGATGCCACGCCTGGACTA
AACAAATCTCTTCCTTTGACTAATGAGATCCTGATGGAAGATTTAATTGGGGGTAAAGGT
AAGGAGAATCTATCAAGAATCGGGTTTACTAAGCAAATGGTTTCAATGGGCCATCAAGCT
AGTGGAGCTCTTGAACTTTGGAATTATCCGATATGGATGAGGGATCTTATTGCCCAAGAT
GTCGATGGAACTGACAGGCCACATCATATTGACCTTGCAGCTCTTGAAATTTATAGGGAC
AGAGAAAGGAGTGTTGCTAGGTACAATGAATTTCGTAGGAGAATGCTTCAAATTCCCATC
TCCAAATGGGAAGATTTGACAGATGATGAGGAAGTCATTAAAACTCTTCATGAAGTTTAT
GGTGATGAAGTAGAACAATTGGATCTGTTAGTTGGAATGTCCGCGGAGAAAAAGATTAAG
GGATTTGCCATCTCTGAGACTGCCTTTATCATATTTCTAATCATGGCATCAAGAAGGTTA
GAGGCAGATAAATTTTTCACCAGCTATTACAACGATGAGACATATACGAAAAAAGGACTT
GAATGGGTGAATACAACAGAAAGCTTAAAAGATGTACTAGATCGACATTATCCAGAGATG
ACTGAGAAATGGATGAACTCCAACAGCGCCTTTTCTGTTTGGGACTCGTCTCCAGAACCT
CACAATCCTATTCCACTCTACTTTCGCGTTCCTCGGACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400001000
PEP Infomation

pacid=37428813 transcript=PGSC0003DMT400001358 locus=PGSC0003DMG402000506 ID=PGSC0003DMT400001358.v4.03 annot-version=v4.03
Sequence

MSFVNLLLFPLRCFIHKDFHDVVDRMSLLNKLLFMMVHLVDKLNLWHRLPVFLGLLYLAA
RRHLHQEYNLINVGVGRKPIDVTSNRAVGKYNDPFNEGGGSEFPFFGRNMMPVDQHEKLK
NPDPMVVATKLLARRKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTQQIELRAPEEVASE
CPLKSFKFFKTKQTPTGLCDIQTGHLNIRTPQWDGSAIYGNNAEVSKKVRTFKDGKLKLS
ENGLLEQDENGKIISGDVRNNWAGLLSLQALFVQEHNLVCDTLKKEYPELKDEDLYRHAK
LVTSAVIAKIHTIDWTVELLNTDTLLAGMRANWYGLLGKKFKDTFGHVGGSILGGFVGMK
KPEDHGVPYSLTEEFTSVYRMHQLLPDTLQLRNIDATPGLNKSLPLTNEILMEDLIGGKG
KENLSRIGFTKQMVSMGHQASGALELWNYPIWMRDLIAQDVDGTDRPHHIDLAALEIYRD
RERSVARYNEFRRRMLQIPISKWEDLTDDEEVIKTLHEVYGDEVEQLDLLVGMSAEKKIK
GFAISETAFIIFLIMASRRLEADKFFTSYYNDETYTKKGLEWVNTTESLKDVLDRHYPEM
TEKWMNSNSAFSVWDSSPEPHNPIPLYFRVPRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400001358
Transcript Infomation

pacid=37428813 locus=PGSC0003DMG402000506 ID=PGSC0003DMT400001358.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTAATCTCTTGCTATTTCCTCTTCGTTGTTTCATTCACAAAGATTTTCAT
GATGTCGTTGACAGAATGAGTCTTCTCAACAAACTTTTGTTTATGATGGTTCACTTGGTT
GATAAATTGAACCTGTGGCACCGGCTACCGGTGTTCTTGGGGCTACTTTATCTCGCAGCA
CGGCGACATCTTCATCAGGAATATAATTTGATCAACGTCGGTGTCGGTAGAAAACCTATC
GACGTTACATCAAATCGGGCCGTTGGAAAATACAACGACCCTTTTAATGAAGGAGGTGGC
AGTGAATTTCCTTTCTTTGGTAGGAATATGATGCCTGTTGATCAACATGAAAAGTTAAAG
AATCCAGATCCTATGGTAGTTGCAACAAAGCTACTAGCACGCAGAAAATTCATAGACACA
GGAAAACAATTTAACATGATAGCTGCCTCATGGATACAATTTATGATTCATGATTGGATC
GATCATTTGGAAGATACTCAACAGATTGAGCTAAGGGCACCTGAAGAAGTTGCAAGTGAG
TGTCCTCTCAAGTCCTTTAAGTTTTTCAAGACCAAGCAAACTCCTACGGGTTTATGTGAT
ATCCAGACTGGTCACTTGAACATTCGTACTCCACAATGGGATGGAAGTGCTATTTATGGG
AACAACGCAGAAGTTTCAAAGAAAGTGAGGACATTTAAAGATGGAAAATTGAAACTATCA
GAAAATGGGCTCCTTGAACAAGATGAAAATGGAAAAATCATCTCTGGTGATGTTCGCAAT
AATTGGGCTGGACTTTTGTCACTGCAGGCACTCTTTGTTCAAGAGCATAATCTTGTTTGT
GACACCTTGAAGAAAGAATATCCAGAATTGAAAGATGAGGACTTGTATCGTCATGCAAAG
CTTGTCACTTCTGCTGTAATTGCGAAAATTCACACCATAGATTGGACAGTTGAACTTCTC
AATACCGACACCCTTCTAGCAGGAATGCGCGCCAATTGGTATGGATTGCTAGGAAAGAAA
TTCAAGGATACATTTGGGCATGTTGGAGGTTCCATTTTAGGTGGTTTTGTGGGAATGAAG
AAACCTGAGGATCATGGTGTGCCTTATTCCTTAACTGAGGAATTTACGAGTGTCTATCGG
ATGCATCAACTCCTACCTGATACGCTTCAGCTAAGAAATATCGATGCCACGCCTGGACTA
AACAAATCTCTTCCTTTGACTAATGAGATCCTGATGGAAGATTTAATTGGGGGTAAAGGT
AAGGAGAATCTATCAAGAATCGGGTTTACTAAGCAAATGGTTTCAATGGGCCATCAAGCT
AGTGGAGCTCTTGAACTTTGGAATTATCCGATATGGATGAGGGATCTTATTGCCCAAGAT
GTCGATGGAACTGACAGGCCACATCATATTGACCTTGCAGCTCTTGAAATTTATAGGGAC
AGAGAAAGGAGTGTTGCTAGGTACAATGAATTTCGTAGGAGAATGCTTCAAATTCCCATC
TCCAAATGGGAAGATTTGACAGATGATGAGGAAGTCATTAAAACTCTTCATGAAGTTTAT
GGTGATGAAGTAGAACAATTGGATCTGTTAGTTGGAATGTCCGCGGAGAAAAAGATTAAG
GGATTTGCCATCTCTGAGACTGCCTTTATCATATTTCTAATCATGGCATCAAGAAGGTTA
GAGGCAGATAAATTTTTCACCAGCTATTACAACGATGAGACATATACGAAAAAAGGACTT
GAATGGGTGAATACAACAGAAAGCTTAAAAGATGTACTAGATCGACATTATCCAGAGATG
ACTGAGAAATGGATGAACTCCAACAGCGCCTTTTCTGTTTGGGACTCGTCTCCAGAACCT
CACAATCCTATTCCACTCTACTTTCGCGTTCCTCGGACATAG