Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001354
CDS Infomation

pacid=37425800 polypeptide=PGSC0003DMP400000996 locus=PGSC0003DMG401000506 ID=PGSC0003DMT400001354.v4.03 annot-version=v4.03
Sequence

ATGACTATGATTATGCTCAAGAATCTCTTGTTCTCCCCTCTTCGTGGTTTCATCCACAAA
GATTTTCATCAGATACTTGACAAAATGAATCTCCGCGACAAACTTTCATTTCTGATAGTT
CATATCGTTGATAAACATAACTTGTGGCACCGAGTACCGGTGTTTTTGGGGCTAGTTTAT
CTTGCACTTCGTCGGCATCTTAATCAGGAATATAATTTGATCAACGTCGGTAGAACACCT
ACCGGAGTCCGATCAAATCCCGGGGACTTCCCTTATAGAACTGCAGATGGAAAATATAAT
GATCCTTTCAATGAAGGAGCAGGAAGTGAATTTTCTTTCTTTGGGAGGAATATGATGCCT
GTTGATCAACATGACAAGTTAAAGAATCCGGATCCAATGGTAGTGGCAACAAAGCTGCTA
GCACGCAGAAAATTCATAGACACAGGAAAACAATTTAACATGATAGCTGCCTCATGGATA
CAATTTATGATTCATGATTGGATCGATCATTTAGAAGATACTCAACAGATTGAGGAGCTT
AGGGCACCTGAAGAAGTTGCAAGTCAATGTCCTCTCAAGTCCTTTAAGTTTTACAAATCA
AAAGAAACTCCTACCGGCTTTTACGAAATTAAAACGGGTTACTTGAATAGGCGTACCCCT
TGGTGGGATGGAAGTGCTATTTATGGGAGCGACGTAGAGATCTTGAAGAAAGTAAGGACA
TTTAAAGACGGAAAATTGAAACTATCAGAAAATGGACTCCTTGAACAAGATGAAAATGGA
AAAATCATCTCTGGTGATGTTCGCAATACTTGGGCTGGACTTTTGTCACTGCAGGCGCTA
TTTGTACAAGAGCATAATCTTGTTTGTGATGCCTTGAAGAAAGAATATCCAGAATTGGAG
GATGAGGTCTTGTATCGTCATGCAAGACTGGTGACTTCTGCTGTTATAGCAAAAGTTCAC
ACCATAGATTGGACTGTGGAGCTTCTCAAAACGGACACCTTATTAGCAGCAATGCGGGCC
AATTGGTATGGATTGTTAGGGAAGAAATTTAAAGATACATTTGGGCACGTTGGAGGTGCC
ATTTTGGGTGGTTTAGTGGGAATGAAAAAACCTGAAAATCATGGAGTGCCTTATTCCTTA
ACTGAAGAATTTGTGAGTGTCTATAGAATGCATCAACTCTTACCTGATAAACTTCAGTTA
AGAAATATAGATACAACTTCTGGACCAAATAAATCTCTCCCTTTGACTAACGAAATCCCA
ATGGAAGATTTAATTGGAGGTAAAGGAGCGAAGAATTTATCTAAAATCGGGTTTATTACT
CAAATGGTTTCAATGGGACATCAAGCATGTGGAGCTCTTGAGCTTTGGAATTATCCAGTG
TGGATGAGAGATCTTGTTGCTCAAGATGTTGATGGAACTGACAGACCAGATCATGTTGAC
CTTCCAGCTCTCGAAATTTATAGGGACAGAGAAAGGAGTGTTGCTAGGTACAATGAATTT
CGTAGAAGGATGTTGCAAATTCCCATCACTAAATGGGAAGACTTGACGGATGATGAGGAA
GTTATTAAAACACTTGATGAAGTATATGGTGATGATGTAGAACAATTGGATCTGTTAGTT
GGAATGTCCGCTGAGAAAAAAATAAAAGGATTTGCCATATCTGAGACTGCCTTTTTCATA
TTCCTTCTCATGGCATCAAGGAGGTTAGAGGCAGATAGATTTTTCACAAGCAATTACAAC
GAGGAGACATACACAAAGAAAGGATTGGAATGGGTGAATACTACAGAAAGTTTAAAAGAT
GTTTTAGATCGTCATTATCCAGAAATGACTGATAAATGGATGAATTCAAACAGTGCATTT
TCTGTTTGGGATTCTTCTCCACAACCTCACAATCCTCTTCCACTCTACTTTCGCGTCCCT
AAACATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000996
PEP Infomation

pacid=37425800 transcript=PGSC0003DMT400001354 locus=PGSC0003DMG401000506 ID=PGSC0003DMT400001354.v4.03 annot-version=v4.03
Sequence

MTMIMLKNLLFSPLRGFIHKDFHQILDKMNLRDKLSFLIVHIVDKHNLWHRVPVFLGLVY
LALRRHLNQEYNLINVGRTPTGVRSNPGDFPYRTADGKYNDPFNEGAGSEFSFFGRNMMP
VDQHDKLKNPDPMVVATKLLARRKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTQQIEEL
RAPEEVASQCPLKSFKFYKSKETPTGFYEIKTGYLNRRTPWWDGSAIYGSDVEILKKVRT
FKDGKLKLSENGLLEQDENGKIISGDVRNTWAGLLSLQALFVQEHNLVCDALKKEYPELE
DEVLYRHARLVTSAVIAKVHTIDWTVELLKTDTLLAAMRANWYGLLGKKFKDTFGHVGGA
ILGGLVGMKKPENHGVPYSLTEEFVSVYRMHQLLPDKLQLRNIDTTSGPNKSLPLTNEIP
MEDLIGGKGAKNLSKIGFITQMVSMGHQACGALELWNYPVWMRDLVAQDVDGTDRPDHVD
LPALEIYRDRERSVARYNEFRRRMLQIPITKWEDLTDDEEVIKTLDEVYGDDVEQLDLLV
GMSAEKKIKGFAISETAFFIFLLMASRRLEADRFFTSNYNEETYTKKGLEWVNTTESLKD
VLDRHYPEMTDKWMNSNSAFSVWDSSPQPHNPLPLYFRVPKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400001354
Transcript Infomation

pacid=37425800 locus=PGSC0003DMG401000506 ID=PGSC0003DMT400001354.v4.03 annot-version=v4.03
Sequence

ATGACTATGATTATGCTCAAGAATCTCTTGTTCTCCCCTCTTCGTGGTTTCATCCACAAA
GATTTTCATCAGATACTTGACAAAATGAATCTCCGCGACAAACTTTCATTTCTGATAGTT
CATATCGTTGATAAACATAACTTGTGGCACCGAGTACCGGTGTTTTTGGGGCTAGTTTAT
CTTGCACTTCGTCGGCATCTTAATCAGGAATATAATTTGATCAACGTCGGTAGAACACCT
ACCGGAGTCCGATCAAATCCCGGGGACTTCCCTTATAGAACTGCAGATGGAAAATATAAT
GATCCTTTCAATGAAGGAGCAGGAAGTGAATTTTCTTTCTTTGGGAGGAATATGATGCCT
GTTGATCAACATGACAAGTTAAAGAATCCGGATCCAATGGTAGTGGCAACAAAGCTGCTA
GCACGCAGAAAATTCATAGACACAGGAAAACAATTTAACATGATAGCTGCCTCATGGATA
CAATTTATGATTCATGATTGGATCGATCATTTAGAAGATACTCAACAGATTGAGGAGCTT
AGGGCACCTGAAGAAGTTGCAAGTCAATGTCCTCTCAAGTCCTTTAAGTTTTACAAATCA
AAAGAAACTCCTACCGGCTTTTACGAAATTAAAACGGGTTACTTGAATAGGCGTACCCCT
TGGTGGGATGGAAGTGCTATTTATGGGAGCGACGTAGAGATCTTGAAGAAAGTAAGGACA
TTTAAAGACGGAAAATTGAAACTATCAGAAAATGGACTCCTTGAACAAGATGAAAATGGA
AAAATCATCTCTGGTGATGTTCGCAATACTTGGGCTGGACTTTTGTCACTGCAGGCGCTA
TTTGTACAAGAGCATAATCTTGTTTGTGATGCCTTGAAGAAAGAATATCCAGAATTGGAG
GATGAGGTCTTGTATCGTCATGCAAGACTGGTGACTTCTGCTGTTATAGCAAAAGTTCAC
ACCATAGATTGGACTGTGGAGCTTCTCAAAACGGACACCTTATTAGCAGCAATGCGGGCC
AATTGGTATGGATTGTTAGGGAAGAAATTTAAAGATACATTTGGGCACGTTGGAGGTGCC
ATTTTGGGTGGTTTAGTGGGAATGAAAAAACCTGAAAATCATGGAGTGCCTTATTCCTTA
ACTGAAGAATTTGTGAGTGTCTATAGAATGCATCAACTCTTACCTGATAAACTTCAGTTA
AGAAATATAGATACAACTTCTGGACCAAATAAATCTCTCCCTTTGACTAACGAAATCCCA
ATGGAAGATTTAATTGGAGGTAAAGGAGCGAAGAATTTATCTAAAATCGGGTTTATTACT
CAAATGGTTTCAATGGGACATCAAGCATGTGGAGCTCTTGAGCTTTGGAATTATCCAGTG
TGGATGAGAGATCTTGTTGCTCAAGATGTTGATGGAACTGACAGACCAGATCATGTTGAC
CTTCCAGCTCTCGAAATTTATAGGGACAGAGAAAGGAGTGTTGCTAGGTACAATGAATTT
CGTAGAAGGATGTTGCAAATTCCCATCACTAAATGGGAAGACTTGACGGATGATGAGGAA
GTTATTAAAACACTTGATGAAGTATATGGTGATGATGTAGAACAATTGGATCTGTTAGTT
GGAATGTCCGCTGAGAAAAAAATAAAAGGATTTGCCATATCTGAGACTGCCTTTTTCATA
TTCCTTCTCATGGCATCAAGGAGGTTAGAGGCAGATAGATTTTTCACAAGCAATTACAAC
GAGGAGACATACACAAAGAAAGGATTGGAATGGGTGAATACTACAGAAAGTTTAAAAGAT
GTTTTAGATCGTCATTATCCAGAAATGACTGATAAATGGATGAATTCAAACAGTGCATTT
TCTGTTTGGGATTCTTCTCCACAACCTCACAATCCTCTTCCACTCTACTTTCGCGTCCCT
AAACATTAA