Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001350
CDS Infomation

pacid=37428416 polypeptide=PGSC0003DMP400000994 locus=PGSC0003DMG400000505 ID=PGSC0003DMT400001350.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTATGCTCAAGAATCTCTTGCTATCCCCTCTTCGTAAATTCATCCACAAA
GATTTCCATGAGATCTTCGAGAAAATGACCCTCATCGATAAATTATTTTTTCTGATTGTT
CATTTTATTGATAAGTACAACTTTTGGCACCGGCTACCGGTGTTCTTTGGGCTACTTTAT
CTTGGAGCACGGCGGACTCTTCACCAGCAATATAATTTGATCAACGTCGGTAGAACACCT
ACCGGCGTTCGATCAAATCCGGCAGATTACCCTTATAGAACTGCTGATGGAAAATTCAAT
GACCCTTTTAATGAAGGAGCAGGCAGTCAATTTTCTTTCTTTGGCAGGAATATGATGCCT
GTTCATCAGGATAATAAGTTAAAGAAGCCAGATCCAATGGTAGTAGCAACGAAGCTTCTA
GCACGAAAAAAATTCATAGACACAGGAAAACAATTCAACATGATAGCTGCCTCTTGGATA
CAATTTATGGTTCATGATTGGATCGATCATTTGGAAGACACTCAACAGGTTGAGCTAAGG
GCACCAAAAGAAGTTGCTAATGAATGCCCTCTCAAGTCCTTTAGGTTTAACAAGTCCAAG
GAAACTCCTACAGATTTTTATGAAATCAAAAAAGGTCACTTGAACATCCGTACTCCCTGG
TGGGACGGAAGTGTAATTTATGGAAGTAACGAGGATGTTTTGAAGAAAGTGAGAACATTT
AAAGACGGAAAGCTGAAATTATCAGAAAATGGACTCATCCAACAAGATGAAAATGGAAAA
ATTATCTCTGGTGATGTTCGTAACACTTGGGCTGGACTTTTAACACTACAAGCTCTCTTT
GTTCAAGAGCACAATGCTGTTTGTGACACTTTGAAGAAAGAATATCCAGAATTAAAAGAC
GAAGAGTTGTATCGTCATGCAAGGCTAGTCACTTCAGCTGTCATTGCAAAAGTTCACACC
ATAGATTGGACTGTTCAGCTTCTCAAAACCGATACTTTGCTTGCTGGAATGCGTGCCAAT
TGGTATGGATTACTAGGAAAGAAATTCAAGGATACATTTGGGCATGTTGGCTCCATTTTA
AGTGGTGTTGTTGGAATGAAAAAACCTGAGAATCATGGAGTGCCTTATTCCCTAACTGAA
GAATTCGTGTGTGTTTATAGAATGCATCAACTCTTACCTGATACACTTCAGCTAAGAAAT
ATAGATGCCACGCCTGGACCAAACAAATCTCTCCCTTTGACTAATGAAATTCCGATGGAA
GAAGTAGTTGGGAGTAAAGGAAAAGAGAATTTATCAAGAATTGGGTTTACTAAGCAAATG
GTTTCAATGGGGCATCAAGCTAGTGGAGCTCTTGAGCTTTGGAATTATCCAGTGTGGATG
AGAGATCTTATTGCCCAAGATGTTGATGGAACTGATAGGCCACATCATATTGACCTTGCA
GCCCTTGAAATTTATAGAGATAGAGAAAGAAGTGTGGCTAGGTACAATGACTTTCGAAGA
GGAATGCTACAAATTCCTATTTCGAAATGGGAAGATTTGACGGATGATGAAGAAGCAATC
AAAACACTTCGTGAAGTATATGATGATGATATAGAAGAGTTGGATTTATTAGTGGGACTC
ATGGCGGAGAAAAAGATTAAAGGATTTGCCATTTCAGAAACTGCGTTCAACATATTCCTT
CTCATGGCTATAAGGAGGTTAGAGGCAGACAGATTTTTCACGAGTAACTATAACGAGGAG
ACGTATACAAAGAAAGGATTGGAATGGGTGAATACTACTGAAGGTTTGAAAGATGTGTTA
GATCGTCACTATCCAGAAATGACTGAAAAATGGATGAATTCAAACAGTGCATTTTCTGTT
TGGGACTCTTCTCCAGAACCTCACAATCCTATTCCACTCTATTTTCGTGTTCCTCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400000994
PEP Infomation

pacid=37428416 transcript=PGSC0003DMT400001350 locus=PGSC0003DMG400000505 ID=PGSC0003DMT400001350.v4.03 annot-version=v4.03
Sequence

MSFVMLKNLLLSPLRKFIHKDFHEIFEKMTLIDKLFFLIVHFIDKYNFWHRLPVFFGLLY
LGARRTLHQQYNLINVGRTPTGVRSNPADYPYRTADGKFNDPFNEGAGSQFSFFGRNMMP
VHQDNKLKKPDPMVVATKLLARKKFIDTGKQFNMIAASWIQFMVHDWIDHLEDTQQVELR
APKEVANECPLKSFRFNKSKETPTDFYEIKKGHLNIRTPWWDGSVIYGSNEDVLKKVRTF
KDGKLKLSENGLIQQDENGKIISGDVRNTWAGLLTLQALFVQEHNAVCDTLKKEYPELKD
EELYRHARLVTSAVIAKVHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDTFGHVGSIL
SGVVGMKKPENHGVPYSLTEEFVCVYRMHQLLPDTLQLRNIDATPGPNKSLPLTNEIPME
EVVGSKGKENLSRIGFTKQMVSMGHQASGALELWNYPVWMRDLIAQDVDGTDRPHHIDLA
ALEIYRDRERSVARYNDFRRGMLQIPISKWEDLTDDEEAIKTLREVYDDDIEELDLLVGL
MAEKKIKGFAISETAFNIFLLMAIRRLEADRFFTSNYNEETYTKKGLEWVNTTEGLKDVL
DRHYPEMTEKWMNSNSAFSVWDSSPEPHNPIPLYFRVPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400001350
Transcript Infomation

pacid=37428416 locus=PGSC0003DMG400000505 ID=PGSC0003DMT400001350.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTATGCTCAAGAATCTCTTGCTATCCCCTCTTCGTAAATTCATCCACAAA
GATTTCCATGAGATCTTCGAGAAAATGACCCTCATCGATAAATTATTTTTTCTGATTGTT
CATTTTATTGATAAGTACAACTTTTGGCACCGGCTACCGGTGTTCTTTGGGCTACTTTAT
CTTGGAGCACGGCGGACTCTTCACCAGCAATATAATTTGATCAACGTCGGTAGAACACCT
ACCGGCGTTCGATCAAATCCGGCAGATTACCCTTATAGAACTGCTGATGGAAAATTCAAT
GACCCTTTTAATGAAGGAGCAGGCAGTCAATTTTCTTTCTTTGGCAGGAATATGATGCCT
GTTCATCAGGATAATAAGTTAAAGAAGCCAGATCCAATGGTAGTAGCAACGAAGCTTCTA
GCACGAAAAAAATTCATAGACACAGGAAAACAATTCAACATGATAGCTGCCTCTTGGATA
CAATTTATGGTTCATGATTGGATCGATCATTTGGAAGACACTCAACAGGTTGAGCTAAGG
GCACCAAAAGAAGTTGCTAATGAATGCCCTCTCAAGTCCTTTAGGTTTAACAAGTCCAAG
GAAACTCCTACAGATTTTTATGAAATCAAAAAAGGTCACTTGAACATCCGTACTCCCTGG
TGGGACGGAAGTGTAATTTATGGAAGTAACGAGGATGTTTTGAAGAAAGTGAGAACATTT
AAAGACGGAAAGCTGAAATTATCAGAAAATGGACTCATCCAACAAGATGAAAATGGAAAA
ATTATCTCTGGTGATGTTCGTAACACTTGGGCTGGACTTTTAACACTACAAGCTCTCTTT
GTTCAAGAGCACAATGCTGTTTGTGACACTTTGAAGAAAGAATATCCAGAATTAAAAGAC
GAAGAGTTGTATCGTCATGCAAGGCTAGTCACTTCAGCTGTCATTGCAAAAGTTCACACC
ATAGATTGGACTGTTCAGCTTCTCAAAACCGATACTTTGCTTGCTGGAATGCGTGCCAAT
TGGTATGGATTACTAGGAAAGAAATTCAAGGATACATTTGGGCATGTTGGCTCCATTTTA
AGTGGTGTTGTTGGAATGAAAAAACCTGAGAATCATGGAGTGCCTTATTCCCTAACTGAA
GAATTCGTGTGTGTTTATAGAATGCATCAACTCTTACCTGATACACTTCAGCTAAGAAAT
ATAGATGCCACGCCTGGACCAAACAAATCTCTCCCTTTGACTAATGAAATTCCGATGGAA
GAAGTAGTTGGGAGTAAAGGAAAAGAGAATTTATCAAGAATTGGGTTTACTAAGCAAATG
GTTTCAATGGGGCATCAAGCTAGTGGAGCTCTTGAGCTTTGGAATTATCCAGTGTGGATG
AGAGATCTTATTGCCCAAGATGTTGATGGAACTGATAGGCCACATCATATTGACCTTGCA
GCCCTTGAAATTTATAGAGATAGAGAAAGAAGTGTGGCTAGGTACAATGACTTTCGAAGA
GGAATGCTACAAATTCCTATTTCGAAATGGGAAGATTTGACGGATGATGAAGAAGCAATC
AAAACACTTCGTGAAGTATATGATGATGATATAGAAGAGTTGGATTTATTAGTGGGACTC
ATGGCGGAGAAAAAGATTAAAGGATTTGCCATTTCAGAAACTGCGTTCAACATATTCCTT
CTCATGGCTATAAGGAGGTTAGAGGCAGACAGATTTTTCACGAGTAACTATAACGAGGAG
ACGTATACAAAGAAAGGATTGGAATGGGTGAATACTACTGAAGGTTTGAAAGATGTGTTA
GATCGTCACTATCCAGAAATGACTGAAAAATGGATGAATTCAAACAGTGCATTTTCTGTT
TGGGACTCTTCTCCAGAACCTCACAATCCTATTCCACTCTATTTTCGTGTTCCTCAGTAG